Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01517 ATGGGCTTGCATGTTCGAATCTTTGTCATCTTGATGATAGCTTTTACAGGAACCTTTTGTACTGCAGATACTGACTTGCTTGACGTTGCAGCAATCAATAGTTTATATGTTGCTCTGGGCTCGCCGCCTCTTCAAGGTTGGAAAACCACTGGGGGGGATCCATGTGCAGAACTGTGGCAAGGCGTGTCTTGTGTCTTCTCCAACATAACTCAATTAACTCTCAGAGGCATGAATTTGGGTGGAGAGCTGGGCAGTAATTTAAATTTCCCTTCCATCATTGAAATAGATCTTAGCAACAACCGCATCAGAGGGCCTATTCCATCTGCGCTACCCCCTACTCTGAGGATCTTGTCTCTTTCAAGTAATCAGTTAAATGGAAGTGTTCCAGAAGCCCTATCCTCTCTAACACAATTGTCAGATTTGTCATTAAATAACAACCTTCTGGGTGGACAAATCCCTGATGTGTTTCAGCAGCTTACTGGCCTGATAAACATAGACCTGTCAGCTAACAACTTGAGTGGTCAGCTACCCCCTTCAATGGGAAGTTTATCATTACTTTCAACATTACACATGCAGAATAATGAACTTTCTGGGTTTCTTAATGTTTTGCAAGATCTTCCTCTTCAGGATTTGAATATAGAGAACAATTTATTCTTTGGCCCAATTCCTCCTCAATTGTTGAGCATCCCAAATCTCAGGAAAGATGGAAATCCATTCAATACTACTGTCATCCCATCACCTCCTGCTGCAGCCCCAGCTCCAGTAACCATGGCCCCATCACCTGCCAAAGCCCCTTGGAATGTCGAAAATAATCCAGTTACCTTGGTTGCACCAATACCTGCAAGTTCTAGGAAATCTTTTATATCTAAGAATGTTATTTGGTTTGCCATTGCTGGGTTTTTGGTATTTATTGCGCTAGGAGTTTGTCTTTTTATGTTGTGGTGTTTAAAGAGAAGGCCAGAAAACAAAAATGCTAAAACAATGGATATGGGTTTGGACGCAATGTCATTACATAAACATCAATGCAGTGACTCTTTGGAGAAAGCATCTGGGAAATCAAGGTCTCTTGGATATGGGGAACCAAATAGAAGAACAAATATGATACCAAATGTTCAGGATGAACAGGAAATACATGTGAAGAGAGTATCAGCAAGTTCCAAATTTGCAACATTGCAGCCACCACCATCTCTTCCAATCAATCTTGGTGAAAAGGACTTAACCAAACCAGCCATACCTACCAAAGTTACTGAAAGACAAGAAGTGACACGTTCCTTGCAAGTATATACTATTGCATCACTTCAGCAGTATACAAATAGTTTTTCTCAAGAAAATCATATTGGTGAAGGCACACTAGGTGTCCTTTATCGGGCTGAGCTCCCTGATGGAAAGCAACTGGCAGTGAGGAAACTGAATGCTATTGCTTCTATAGGACATGAACAGTTTCTTCAATTTGTGACCAGTATTTCCAAAATTCAACATGCTAATATTGTGAAGCTTATGGGCTATTGTGCTGAGAATGGTCAGCAACTTCTTGTATATGATTATTTCAGCAATGGAACTCTTCATGACGCACTGTATGAAGATAATGAACTCCATGCGAAACTGTCATGGAATGCACGGATTCGGGTGGCACTTGGAGCTGCTAGAGCTTTAGAGTATCTGCATGAGAACTGCCAGCCACCTTTTGTGCTTCAAAATTTAAAATCAGCTAATGTTCTCTTGAATACTGAGCTTGAAGTATGTGTCTCTGATTGTGAATTTGGTCCTTTACTGTCTTCTGGATCTGCTGGTCAGTTGTCAGGATGCCTCCTCACTGCAAATGGTTATGGTGCGCCAGAACTTGAGTCAGGGAGTTATACAAAGCAGAGTGATGTCTTTAGTTTTGGAGTTGTAATGCTAGAACTCCTCACTGGACGAAAATCCTGTGACAGGTCACGATCTCGTGGTGAGCAATTTCTGGTCAGATGGGCGGTTCCTCAACTACATGACATTGATGCTTTAACAAAAATGGTTGACCCCTCCTTAAATGGAGCTTATTCTATGAAGTCCTTGTCACGTTTTGCAGACATCATTTCTTCATGTCTACAGCGTGAACCAGAGTTCCGACCAGCAATGGCGGAAGTTGTGCAGGATCTCCTACGAATGATCTAG 2151 0.4189 MGLHVRIFVILMIAFTGTFCTADTDLLDVAAINSLYVALGSPPLQGWKTTGGDPCAELWQGVSCVFSNITQLTLRGMNLGGELGSNLNFPSIIEIDLSNNRIRGPIPSALPPTLRILSLSSNQLNGSVPEALSSLTQLSDLSLNNNLLGGQIPDVFQQLTGLINIDLSANNLSGQLPPSMGSLSLLSTLHMQNNELSGFLNVLQDLPLQDLNIENNLFFGPIPPQLLSIPNLRKDGNPFNTTVIPSPPAAAPAPVTMAPSPAKAPWNVENNPVTLVAPIPASSRKSFISKNVIWFAIAGFLVFIALGVCLFMLWCLKRRPENKNAKTMDMGLDAMSLHKHQCSDSLEKASGKSRSLGYGEPNRRTNMIPNVQDEQEIHVKRVSASSKFATLQPPPSLPINLGEKDLTKPAIPTKVTERQEVTRSLQVYTIASLQQYTNSFSQENHIGEGTLGVLYRAELPDGKQLAVRKLNAIASIGHEQFLQFVTSISKIQHANIVKLMGYCAENGQQLLVYDYFSNGTLHDALYEDNELHAKLSWNARIRVALGAARALEYLHENCQPPFVLQNLKSANVLLNTELEVCVSDCEFGPLLSSGSAGQLSGCLLTANGYGAPELESGSYTKQSDVFSFGVVMLELLTGRKSCDRSRSRGEQFLVRWAVPQLHDIDALTKMVDPSLNGAYSMKSLSRFADIISSCLQREPEFRPAMAEVVQDLLRMI 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01517 716 Pfam Protein tyrosine and serine/threonine kinase 442 712 IPR001245 GO:0004672|GO:0006468
Accr11g01517 716 SUPERFAMILY L domain-like 28 233 - -
Accr11g01517 716 MobiDBLite consensus disorder prediction 346 366 - -
Accr11g01517 716 SUPERFAMILY Protein kinase-like (PK-like) 419 712 IPR011009 -
Accr11g01517 716 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 406 515 - -
Accr11g01517 716 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 516 716 - -
Accr11g01517 716 ProSiteProfiles Protein kinase domain profile. 440 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01517 716 Gene3D Transferase(Phosphotransferase) domain 1 516 715 - -
Accr11g01517 716 Pfam Leucine rich repeat 112 172 IPR001611 GO:0005515
Accr11g01517 716 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 714 IPR046959 -
Accr11g01517 716 Gene3D Ribonuclease Inhibitor 28 252 IPR032675 -
Accr11g01517 716 Gene3D Phosphorylase Kinase; domain 1 404 515 - -
Accr11g01517 716 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 25 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01517 Accr-Chr11 40364189 40372686 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01517 22 716 Strubbelig Receptor Gene Family AT4G03390 52.419 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Accr11g01517 PK_Tyr_Ser-Thr 3.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01517 - - gmx:100793423 913.294