Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01479 ATGGTTTCTAGGTCGTATTCTAACTTGTTAGAGCTTACTTCCTGTGGTTCCCCAACTTTTGGTCTGGAGAAGAAGAGGCTTCCTCGAGTGGCAACTGTTGCTGGAGTACTTTCAGAACTAGATGATGAGAACAACAGTGCTGGCTCTGATGCTCCGTCATCCATCACTCAGGATAGGATGATTGTTGTCGGTAACCAACTTCCTTTGCAAGCTCAAAGAAAAGATGATGGTAAGTGGGACTTCTCTTTGGACGAGGACTCTCTTCTTTTACAGCTGAAAGATGGCCTAGGAGATGATGTAGAAGTGATTTATATTGGGTGTCTTAAAGAAGAAATTGATGTAAGTGAGCAAGATGATGTTGCTCAGTATTTGCTTGACACTTTCAAATGTGTACCCACGTTCTTACCTCCTGAGCTTTTCAGCAAATTCTATCATGGGTTCTGCAAGCAGCATCTATGGCCTTTATTTCACTACATGCTTCCACTGTCACCAGATCTTGGTGGTCGATTTGATCGCTCTCTTTGGCAAGCTTATGTTTCTGTGAATAAGATATTTGCAGATAAAGTAATGGAAGTCATTAGCCCTGATGATGACTTTGTGTGGGTCCATGACTACCATTTGATGGTTTTGCCAACTTTTTTGAGGAAGAGATTTAACCGGGTGAGGCTAGGATTCTTCCTCCACAGCCCATTTCCTTCCTCTGAGATTTACCGAACACTTCCTGTAAGGGATGAACTTCTGAGAGCTCTTCTGAACTCTGATCTCATTGGGTTTCATACTTTTGATTATGCAAGGCACTTTCTCTCATGTTGTAGTAGAATGCTTGGGCTTTCTTATCAATCCAAGCGGGGCTACATAGGCCTTGAGTACTATGGTAGAACTGTTAGTATCAAGATTCTTCCTGTTGGAATCCATATTGGCCAACTTCAATCTGTCATGAATTTTTCTGATACAGAGAGTAAGGTCTCAGAATTACGAGACCAGTTCAGAGGTCAAACTGTGATGCTTGGGGTTGATGACATGGATATCTTCAAAGGAATTAGCTTAAAACTTTTGGCCATGGAGCAATTGCTCTACCAACATCCAGATAAGAGGGGCCAAGTTGTTATGGTTCAAATTGCAAATCCTGCAAGAGGACGGGGGAAGGATGTACAGGAGGTACAAAGTGAAACTTATGCCACTGTAAAGAGGATTAATGATACATTTGGAAGGCCTGGGTACACTCCTGTTATCTTGATTGACACACCTCTGAAATTCTATGAGCGAATAGCTTATTATGTAATTGCAGATTGTTGTCTTGTTACAGCTGTGAGAGATGGTATGAACCTTATACCCTATGAATATGTCATATGTCGACAAGGAAATGAGAAACTGGACCAGATTTTGGGGATAAATCCATTTTCTCAAAAGAGGAGCATGCTGGTGGTATCTGAATTCATTGGGTGCTCCCCTTCATTAAGTGGAGCAATTCGAGTGAATCCATGGAACATTGATGCTGTTGCCGAAGCTATGGATTCTGCTCTTGTAATCCCAGACTCTGAAAAACAGATGCGACATGAGAAACATTATAGGTATGTTAGTACACATGATGTAGCATATTGGGCACGGAGCTTCTTGCAGGATTTGGAAAGAGCATGTAGGGACCATCTTAGAAGGAGGTGCTGGGGCATTGGTTTTGGCCTAGGGTTTCGGGTAATTGCTTTAGATCCAAATTTTAGAAAGCTATCAGTTGAGCATATTGTTTCAGCTTACAAGAGGACCAAGCACCGGGCAATTCTTTTGGATTATGATGGTACCATGATGCAGCCAGGAACTATTAGTACAACCCCAAGTGCTGATGCTGTTGGAATCTTGAAGAGCCTGTGCAGCGACCCTGATAATGTTGTTTTTGTTGTTAGTGGGAAGGAGAGAAAGACTCTGACGGACTGGTTTTCTTCATGTGAAAGGCTAGGGATTGCTGCAGAACATGGTTACTTTTTGAGGACAACTAATGCTGCAGAATGGGAAACTTGTCTTTCTGTACCGGATTTTGACTGGAAACAGATCGCTGAGCCAGTAATGCAATTATACACAGAAACAACAGATGGTTCTAACATTGAGGCCAAAGAGAGTGCTTTAGTTTGGAATTACCAGTATGCAGACCGTGATTTTGGTTCATGCCAGGCTAAGGAGCTTCTAGACCACCTGGAAAGTGTTCTTGCGAATGAACCTGTTTCTGTTAAAAGTGGCCCACACATTGTGGAGGTTAAACCCCAGGGTGTCAACAAGGGAATTGTAGCAGAACATCTTCTCGCAACGATGCGTGAGAAGGGAGTAATTCCAGATTTTGTTCTATGCATTGGGGATGACAGATCAGATGAGGACATGTTTGAAGTCATCATGAGTGCGCGTGAGTCCTTGTCGCCAGTCGCTGAGGTGTTCGCCTGCACGGTGGGGCAGAAACCAAGCAAGGCCAAGTATTACTTGGAAGACACAAGTGAGATATTGAGAATGTTGCAAGGCCTTGCCAATGCTTCAGGGCAATCTGTTAAAAGTTCTCCCCAACCTTCATCACACCGAGCATTTTTCTGA 2571 0.4313 MVSRSYSNLLELTSCGSPTFGLEKKRLPRVATVAGVLSELDDENNSAGSDAPSSITQDRMIVVGNQLPLQAQRKDDGKWDFSLDEDSLLLQLKDGLGDDVEVIYIGCLKEEIDVSEQDDVAQYLLDTFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVRLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQSVMNFSDTESKVSELRDQFRGQTVMLGVDDMDIFKGISLKLLAMEQLLYQHPDKRGQVVMVQIANPARGRGKDVQEVQSETYATVKRINDTFGRPGYTPVILIDTPLKFYERIAYYVIADCCLVTAVRDGMNLIPYEYVICRQGNEKLDQILGINPFSQKRSMLVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMDSALVIPDSEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHLRRRCWGIGFGLGFRVIALDPNFRKLSVEHIVSAYKRTKHRAILLDYDGTMMQPGTISTTPSADAVGILKSLCSDPDNVVFVVSGKERKTLTDWFSSCERLGIAAEHGYFLRTTNAAEWETCLSVPDFDWKQIAEPVMQLYTETTDGSNIEAKESALVWNYQYADRDFGSCQAKELLDHLESVLANEPVSVKSGPHIVEVKPQGVNKGIVAEHLLATMREKGVIPDFVLCIGDDRSDEDMFEVIMSARESLSPVAEVFACTVGQKPSKAKYYLEDTSEILRMLQGLANASGQSVKSSPQPSSHRAFF 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01479 856 Gene3D Glycogen Phosphorylase B; 312 527 - -
Accr11g01479 856 NCBIfam trehalose-phosphatase 588 836 IPR003337 GO:0003824|GO:0005992
Accr11g01479 856 Gene3D Glycogen Phosphorylase B; 52 311 - -
Accr11g01479 856 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 719 848 - -
Accr11g01479 856 Pfam Glycosyltransferase family 20 59 543 IPR001830 GO:0003824|GO:0005992
Accr11g01479 856 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 547 - -
Accr11g01479 856 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 589 706 - -
Accr11g01479 856 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 34 837 IPR001830 GO:0003824|GO:0005992
Accr11g01479 856 CDD HAD_TPP 591 827 - -
Accr11g01479 856 CDD GT20_TPS 59 543 IPR001830 GO:0003824|GO:0005992
Accr11g01479 856 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 52 310 - -
Accr11g01479 856 NCBIfam HAD-IIB family hydrolase 592 794 IPR006379 -
Accr11g01479 856 Gene3D - 715 850 IPR023214 -
Accr11g01479 856 Gene3D - 589 706 IPR023214 -
Accr11g01479 856 FunFam Trehalose-6-phosphate synthase 2 673 752 - -
Accr11g01479 856 FunFam Alpha,alpha-trehalose-phosphate synthase 312 527 - -
Accr11g01479 856 SUPERFAMILY HAD-like 590 836 IPR036412 -
Accr11g01479 856 Pfam Trehalose-phosphatase 593 826 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01479 Accr-Chr11 38865093 38868453 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01479 1 836 Trehalose Biosynthesis Gene Families AT4G17770 78.929 0.0 1429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01479 K16055 - qsa:O6P43_025133 1538.47