Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01440 ATGGCTTTTGAGCCATTAATTTGGTACTGTCAGCCAGAGAAGAACGCCATCTGGGCTAACCTAGTAGATAGTGCTTTTGGGCCCTATACACCATGTGCAATGAACACTCTTGTGATCTCTGTCTCCAATTTGGTTCTTATTGGCCTTTGTTTATATCGAATATGGCTGACTATTAGCAATGCCAAAGCTCAGAGGTTTTGCTTGAGCTCAAATTACTATAATTATTTGCTGGGATTGTTGGCTGGTTACTGTGCTGCTCAACCTTTACTGAGATTGATATATGGCATTTCTGATTTCAACTTGAGTGGAGAATCTGGTTTTGCTCCTTTTGAGATAACAGGTCTGATAATTGAAGCACTTACTTGGTCCTCAATGTTAATACTTATTCTCATGGAAACTAGGATTTATATAAAGCAATTTCGGTGGTACGTGAGATTTGGAGTCTTTTATGTCTTGGTGGCAGATCTTGTAATGCTTAATCTTCGTCTATCAGTGATAAATTACTGCAGCAGATCTGCCCTGTATCTGTTCATCAGCTCTATGTTCTGCCAGGTTCTATTTGGAATTCTCCTTCTTGTTTACATTCCCAGTTTAGTTCCTTATGCTGGCTATGTAACAGCAAGAGAAGATTTTCATGAGAATGCTGAGTATGAACCACTTCGTGGAGAACAAGAAGTTTGCCCTGAGAGATATGTTAACTTATTCTCCAGATTATCGTTTGGTTGGATGACTCCACTCATGCAACAAGGCTATAGAAAACCCATCACTGAAAATGATGTTTGGAAGTTAGACACATGGGATCAAACCGACACGCTTTTTGAAAAGTTCCAAAAGTGTTGGATGTTAGAATGTCAAAGGTCGAAGCCTTGGCTTTTAAGAGCATTGAATAATAGCCTTGGAAAAAGGTTTTGGTGGGGAGGCGTTTATAAGATTTTTTATGATCTTTCTCAGTTTGTGGGCCCTATTTTGCTGAATAATCTATTAAAATCGATGCAACGAGGAGATCCATCATGGATTGGTTACATCTATGCTTTCTCCATGTTTGTAGGAGTGTCATTTGGTGTACTTTGTGAGGGTCAATATTTTCAAAGTGTTATGCGTGTTGGTTTCCGGCTAAGGTCAACTTTGGTGGCTGGGGTATTTTACAAATCCCTAAGGTTAACGCATGAGGACCGTAGCAAGTTCTCATCAGGGAAGATCATGAATATGATAACAACAGATGCCAGTGCTCTACAGCAAATATGTCAGCAGCTTCATGGACTATGGTCATCACCGTTCCGTATCATCTTGGCTATGGTTCTTCTATACCAGCAATTGGGTGTTGCTTCACTTATTGGATTAATGATGCTGGTTCTCATGATCCCAATGCAGACAATTGTTCTCAGCAAAATGCGAAAATTCGTCAGGGAAGGGCAGCAGCAAACAGACAAGAGAGTTAGCCTTATGAATGAAATTCTGACTGCCATGGATACTGTGAAGTGTTATGCATGGGAGACAAGCTTGGAGTCTAAAGTTCAAAGCATACGAGATGATGAACTTTTATGGTTCCGTCATGCGCAACTTCTATCTGCTCTCAACTCTTTTATGCTGAACAGTATCCCAGTTCTTGTGACCATAACCACATTCGGAGTGTTCACTTTACTTGGTGGAGATTTGACACCTGCAAGGGCATTCACCTCTTTATCTCTATTTGCAGTTTTGCGCTTTCCTTTAAATATGCTTCCCAGTTTGTTAAGTCAGGCTGTGAATGCAAATGTGTCATTGCATCGTTTACATGAACTATTCTTAGCTGAGGAGAGAGTTTTAAAACCCAATCCCCCTCTTGTACCAGGACTCCCAGCCATATCCATCCAGAATGGATACTTTTCATGGGATACAAAGATGGAGAATCCTGTGTTATCGGATATAAACTTGGAAATACCCATTGGCAGCTTAGTTGCAATAGTTGGTGGTACGGGACAAGGAAAAACATCACTTGTGTCAGCAATGATTGGAGAGCTTCCTCCTTTAGCTAATGCAAATGCTATAATCAGAGGCACTGTTGCTTATGTTCCTCAAATTTCATGGATTTTCAATGCTACAGTCCGTGAAAATATCCTATTTGGATCTAAGTTTGAATGTGAACGGTATCAGAAGGCCATTGATGTCACAGCTTTACAGCATGATATCAACTTACTTCCTGGACGTGATTTTACAGAGATTGGAGAAAGAGGAGTCAATATCAGTGGTGGTCAAAAGCAAAGAGTTTCCTTGGCAAGAGCTGTATACTCAAATTCAGATGTATATATATTTGATGACCCTTTAAGCGCCCTTGATAGTCATGTTGCCCAAACGGTTTTCAAGAGCTGTATAAAGGAAGAGCTGCAAGGAAAAACCAGGATTCTTGTCACCAACCAACTTCATTTCCTCCCTCAGGTGGATCATATCATTCTGATTAGGGAAGGCGTGATCGAAGAGCAGGGAACCTTTGAGAAGCTATCTAAAAGTGGGCCGCTATTCCAGAAACTAATGGAAAATGCGGGCAAAATGGAAGAAAAACTAAATCATAAGAATGACAGAGATGTGTATGACAAAACTACTTTTCCACCAACAACCAATGATGCGATTTTAGAGACACCAAACGGTACAAGCCATAAAAAGAAGGGGAAATCGCAGAAATCTATGCTTATTAAAGAAGAAGAGCGGGAAACAGGAGTTGTTAGCTGGAAAGTTTTGACAAGGTACCAGTCCGCTCTGGGAGGACTTTGGGCGGTTTTAGTACTCTTGACTTGCTATGTAATGACAGAAATTCTTCGAATTTCAAGTAGCACATGGTTAAGTGTGTGGACAAAGAAAAGTACTGCAGCTGGTTATGAACGAGGATATTTTATTTTAATCTATGCACTTCTTTCATTTGGGCAGGTAGTTGTTACTCTTGTAAACTCTTATTGGATGATCATTTCAAGTCTTCATGCTGCCAAAAGATTGCACGATGCCATGTTACATAATATACTACGGGCTCCAATGGTATTCTTTCATACTAATCCTGTTGGACGCATACTTAATAGGTTTGCAAGAGACCTGGGAGACATTGATCGCAACATTGCTAATTTTATGAGCATGTTTTTGGCTCAATTCTGGCAACTCCTTTCAACTTTTGTTCTTATTGGCAGTGTGAGCTCATTATCCCTGTGGGCGATAATGCCACTTCTGACCTTGTTTTATGGAGCTTATTTGTATTACCAGACTACATCTCGTGAGGTGAAGAGGCTGGATTCAATTACAAGATCTCCTGTCTATGCACAGTTTGCTGAAGCATTGAATGGTTTGACAAGCATTCGTGCTTACAAAGCATATGATAAGATAGCACAAATTAGTGGAAAATTTGTGGACAATAATATTAGATTCACTCTGATGAACATAAGTTCAAATCGGTGGCTCACCATAAGGTTGGAAACATTAGGCGGCCTCATGATTTGGTTGATAGCAACATTTGCTGTGATGCAGAATGCAACAGCCCAAAACCAAGCCATATTTGCATCTACAATGGGTCTACTTCTCACTTATGCTTTAAACATCACAAATATCTTGAGTCGTGTCCTTAGACTAGCTAGTAGTGCTGAAAATAGTTTAAATGCTGTTGAGCGTGTTGACACATATATCGAATTGGAAACTGAGGCTCCAGCTATTATTGAGGGTAACCGGCCACCACCTGGATGGCCATCATCAGGATCAATCGAATTTGAGGATGTTGTCCTGCGGTACAGGCCCGAACTTCCTCCAGTCTTACACGGGTTGTCTTTTAGAGTCTCTCCAACTGAGAAGGTAGGAATTGTTGGACGAACTGGTGCAGGAAAATCCAGCTTGCTCAATGCATTATTCCGGATTGTGGAACTGCAGAAAGGAAGAATCATTATTGATGGTTGTGATATTTCTAAAATTGGAGTCGAAGATTTACGAAAAGTTCTTACTGTCATACCACAATCCCCGGTTCTTTTCTCTGGAACTGTTCGATTCAATCTTGATCCTTTTAGTGAACACACTGATGCTGAGCTCTGGGAGGCTCTAGAAAGGGCGCATTTGAAAGATGTGATTAGCAGAAATTCATTTGGCCTAGATTTTGAGGTTTCCGAGCAAGGAGAAAACTTCAGTGTTGGGCAGAGACAACTGTTAAGTCTAGCTAGAGCCTTGATACGAAAATCTAAGATTCTTGTTCTAGATGAGGCTACTGCCGCAGTTGATGTTAGAACCGATGCCCTTATACAGAAAACTATTCGCCAAGAATTTAAGTCCTGCACGATGCTCGTTATTGCACACAGACTAAATACAATCATTGACTGCAATCGAATTCTTGTGATTGATTCTGGCAAGGTTCTTGAATACAACACACCTCAGGAGCTCCTACTAGATGAAGGAAGTGCATTTAACAAGATGGTTCAAAGTACTGGACCTGCAAATGCTCAGTACTTGCGTGGCCTAGCATTTGGAACAAATAATGAAATTCTTGAGAATAAAAACAAGGAGCACTTTTCTTTTTCTTCTACTGTTTCCCTTTCACCATCAAGTGATCAACCTTCAAATGCAAAGGACTGA 4572 0.4055 MAFEPLIWYCQPEKNAIWANLVDSAFGPYTPCAMNTLVISVSNLVLIGLCLYRIWLTISNAKAQRFCLSSNYYNYLLGLLAGYCAAQPLLRLIYGISDFNLSGESGFAPFEITGLIIEALTWSSMLILILMETRIYIKQFRWYVRFGVFYVLVADLVMLNLRLSVINYCSRSALYLFISSMFCQVLFGILLLVYIPSLVPYAGYVTAREDFHENAEYEPLRGEQEVCPERYVNLFSRLSFGWMTPLMQQGYRKPITENDVWKLDTWDQTDTLFEKFQKCWMLECQRSKPWLLRALNNSLGKRFWWGGVYKIFYDLSQFVGPILLNNLLKSMQRGDPSWIGYIYAFSMFVGVSFGVLCEGQYFQSVMRVGFRLRSTLVAGVFYKSLRLTHEDRSKFSSGKIMNMITTDASALQQICQQLHGLWSSPFRIILAMVLLYQQLGVASLIGLMMLVLMIPMQTIVLSKMRKFVREGQQQTDKRVSLMNEILTAMDTVKCYAWETSLESKVQSIRDDELLWFRHAQLLSALNSFMLNSIPVLVTITTFGVFTLLGGDLTPARAFTSLSLFAVLRFPLNMLPSLLSQAVNANVSLHRLHELFLAEERVLKPNPPLVPGLPAISIQNGYFSWDTKMENPVLSDINLEIPIGSLVAIVGGTGQGKTSLVSAMIGELPPLANANAIIRGTVAYVPQISWIFNATVRENILFGSKFECERYQKAIDVTALQHDINLLPGRDFTEIGERGVNISGGQKQRVSLARAVYSNSDVYIFDDPLSALDSHVAQTVFKSCIKEELQGKTRILVTNQLHFLPQVDHIILIREGVIEEQGTFEKLSKSGPLFQKLMENAGKMEEKLNHKNDRDVYDKTTFPPTTNDAILETPNGTSHKKKGKSQKSMLIKEEERETGVVSWKVLTRYQSALGGLWAVLVLLTCYVMTEILRISSSTWLSVWTKKSTAAGYERGYFILIYALLSFGQVVVTLVNSYWMIISSLHAAKRLHDAMLHNILRAPMVFFHTNPVGRILNRFARDLGDIDRNIANFMSMFLAQFWQLLSTFVLIGSVSSLSLWAIMPLLTLFYGAYLYYQTTSREVKRLDSITRSPVYAQFAEALNGLTSIRAYKAYDKIAQISGKFVDNNIRFTLMNISSNRWLTIRLETLGGLMIWLIATFAVMQNATAQNQAIFASTMGLLLTYALNITNILSRVLRLASSAENSLNAVERVDTYIELETEAPAIIEGNRPPPGWPSSGSIEFEDVVLRYRPELPPVLHGLSFRVSPTEKVGIVGRTGAGKSSLLNALFRIVELQKGRIIIDGCDISKIGVEDLRKVLTVIPQSPVLFSGTVRFNLDPFSEHTDAELWEALERAHLKDVISRNSFGLDFEVSEQGENFSVGQRQLLSLARALIRKSKILVLDEATAAVDVRTDALIQKTIRQEFKSCTMLVIAHRLNTIIDCNRILVIDSGKVLEYNTPQELLLDEGSAFNKMVQSTGPANAQYLRGLAFGTNNEILENKNKEHFSFSSTVSLSPSSDQPSNAKD 1523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01440 1523 Coils Coil 833 853 - -
Accr11g01440 1523 Pfam ABC transporter 1256 1404 IPR003439 GO:0005524
Accr11g01440 1523 Gene3D - 611 861 IPR027417 -
Accr11g01440 1523 SMART AAA_5 1265 1444 IPR003593 GO:0016887
Accr11g01440 1523 SMART AAA_5 642 822 IPR003593 GO:0016887
Accr11g01440 1523 SUPERFAMILY ABC transporter transmembrane region 289 599 IPR036640 GO:0005524|GO:0016020
Accr11g01440 1523 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 919 1202 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr11g01440 1523 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1229 1471 IPR027417 -
Accr11g01440 1523 FunFam ABC transporter C family member 2 279 600 - -
Accr11g01440 1523 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 609 838 IPR027417 -
Accr11g01440 1523 CDD ABCC_MRP_domain1 615 815 - -
Accr11g01440 1523 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 230 1479 - -
Accr11g01440 1523 FunFam Multidrug resistance-associated protein member 4 1223 1475 - -
Accr11g01440 1523 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1239 1473 IPR003439 GO:0005524
Accr11g01440 1523 CDD ABC_6TM_ABCC_D1 305 591 IPR044746 GO:0140359
Accr11g01440 1523 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 615 839 IPR003439 GO:0005524
Accr11g01440 1523 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 583 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr11g01440 1523 CDD ABCC_MRP_domain2 1237 1457 - -
Accr11g01440 1523 MobiDBLite consensus disorder prediction 866 888 - -
Accr11g01440 1523 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524|GO:0016887
Accr11g01440 1523 FunFam ABC transporter C family member 2 609 855 - -
Accr11g01440 1523 SUPERFAMILY ABC transporter transmembrane region 916 1219 IPR036640 GO:0005524|GO:0016020
Accr11g01440 1523 ProSitePatterns ABC transporters family signature. 1376 1390 IPR017871 GO:0005524|GO:0016887
Accr11g01440 1523 FunFam ABC transporter C family member 2 882 1220 - -
Accr11g01440 1523 Pfam ABC transporter transmembrane region 308 571 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr11g01440 1523 Pfam ABC transporter transmembrane region 919 1163 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr11g01440 1523 CDD ABC_6TM_ABCC_D2 918 1214 IPR044726 GO:0140359
Accr11g01440 1523 Gene3D - 1223 1475 IPR027417 -
Accr11g01440 1523 Gene3D ABC transporter type 1, transmembrane domain 285 600 IPR036640 GO:0005524|GO:0016020
Accr11g01440 1523 Gene3D ABC transporter type 1, transmembrane domain 879 1220 IPR036640 GO:0005524|GO:0016020
Accr11g01440 1523 Pfam ABC transporter 633 768 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01440 Accr-Chr11 37551994 37578198 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01440 560 831 Calmodulin-binding Proteins AT2G36910 28.231 9.55e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01440 - K05665 vun:114175221 2332.75