Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01427 ATGGAGAGTTTCAGAGTTCTGTATCTTTACACCTTGCTGATATGCTTTATAAAACCCCTCACTTCACGAGACATCATCACCCCAGGAAACTTGCTTAGAGATGGCGAGACTTTAGTTTCCTCAAGAGGGTTTTTTGAACTTGGGTTCTTTAGCCCTGGCTCTTCAAATGCTCGATACTTAGGAGCATGGTATAAGAAGTCTCCTTCTACAATCTTCTGGGTGGCTAACCGAGACAAACCTCTCAACAATGATAGGGGAAATGGTGTTTTGCAATTAAATGATCGAGGAGTTCTCCTACTTCTTGATGCCTCAAACAACAACACAGTGTGGTCTTCGAATAATTCATCAATCAAGGAATATAACCCTTTTGTTCAACTCTTGGATTCAGGAAATCTCGTGGTGAAAATTGGATATGGTAGTGACAACAGTGGTAACTTGGAACAACTCTTGTGGCAGAGTTTTGACTACCCTTGTGACACCTTAATGCCGGGAATGAAGCTTGGGTGGGATCAAGAAACTGGTTCGAATAGATTTCTGTCATCCTGGAAAAGTTCAGATGATCCTGGTCGGGGAGATTATGCAATGAAAGTAGACCGTAGAGGGTACCCACAAATCTTTGAACTGAAAGGTTCTGAGGTGATGGTTAGAGCTGGTTCATGGAATGGCTTCTCTCTCACGGGGTTTGCGAATCATATTCCGGATCCTGTAATAAATGCTGAGTTTGTAATGAATGAAAAAGAGGTATATTTTAAGTTAGATCTTATAAATAATTCAGTTTTCTTCAGATATGTAATAAACCCTTCAGGCATAGGACAGAGTTTTGATTGGGTAATTCAAAGAAGCGGCTGGCGGGTAGTGCATACTGGGACACCTGACACGTGTGCTAATTATGCCTTATGTGGTACAAATTCTATCTGTAACATTAGTAACAATCCTGTTTGTGAATGCCTGAGAGGGTATGCACCCAAGAATTTAAAGGACTGGAACGTGTCTGATTGGAATGGTGGCTGCACTAGAAGGGTTTCTTTGAACTGTGATGGTGGTGATGGATTTAAGCAGTATACGGGGATCAAGTTGCCAGACACTTCATCTTCATGGTATAACATGACCATGGACCTTGAGGAATGCAAGAAAACATGTCTGCAAAACTGTTCTTGTGTAGCTTATTCGAATTTGGATATACGGGGAGAAGGAAGTGGCTGCTTGATATGGTTTGATCAACTGCTGGACATGAAACAATTTCCTACAGGGGGACAGGACCTCTATGTACGAGTTCTTGCTTCTGACCTAGATCATTTTAGGGATGAAGGCCGTGGGAGTATGGGCAAGAAGAAGTTATATGGAATTGCGGTTGGCTGTGCACTATTTGTAATGAGTATCATGATTCTTGGATCAACTTTAATTGCAAAGAAAAGGAAACTAAGAAATTCGAGGAAAGAAGTTATGAATATTCCAACATTTGGTTTGTCAATCATAATCAAGGCTACTGATAATTTTTCTATTGTTAACAAATTGGGTGAAGGTGGCTTTGGGCCAGTATACAAGGGTACTTTAGAAGATGGGCAAGAGTTGGCTGTGAAAAGGCTATCAACAAAATCTGGTCAAGGGTTTGAAGAGCTGAGAAATGAAGTTGAGCTGATTGCAAAACTTCAGCACCGTAATCTAGTGAAACTTATTGGTTGTTGCATTGAAGGAGAAGAGAAGCTATTGATCTATGAATACATGCCAAATAAGAGCTTGGACCACTTTATTTTTGATGAAACTCATAGCAAGTTGTTGGATTGGCTTAAGCGTTGGCATATTGTTCATGGCATTGCTCGAGGACTTGTCTATCTTCATATAGATTCCAGATTAAGAATTATTCATAGAGACCTGAAAACCAGCAATATTTTGCTAGATGCTTTTATGAATCCAAAAATATCAGACTTTGGCCTGGCTCGGACATTCTGGGATGATCAGATTGAAGCCAACACTAACAAAGTTGTGGGAACATATGGATATATGCCTCCGGAATATGTTACGCGTGGACAATTTTCAATGAAGTCTGATGTGTTTAGCTTTGGGGTAATAGTGCTAGAGATTGTTAGTGGAAAGAAGAATAGAATATTTTCAGACCCAGAATACTACCTTAATCTCCTTGGACACGCATGGAGACTGTGGATGCAAGGAAGAGCAATGGAACTATTGGATGAATGTTTAAAGGAAAGCTATGCTGAATCTGAAGTCATGAGATGTATACAGGTTGGACTATTATGTGTTCAACAAAGAGCTGAAGATAGGCCTGATATGTCAGCTATAGTTTCAATGTTAATTGGAGAGAAATTGCTGCCACAACCAAAAGCTCCTGGTTTTTACACTTCAAGTGATTTTCCTCGTGATCTAACTTCTTTGCACCAAAGATCAATACAATTCTCACAAAATGAAATTTCTGAAACCACGCTATTGGGAAGATGA 2454 0.4002 MESFRVLYLYTLLICFIKPLTSRDIITPGNLLRDGETLVSSRGFFELGFFSPGSSNARYLGAWYKKSPSTIFWVANRDKPLNNDRGNGVLQLNDRGVLLLLDASNNNTVWSSNNSSIKEYNPFVQLLDSGNLVVKIGYGSDNSGNLEQLLWQSFDYPCDTLMPGMKLGWDQETGSNRFLSSWKSSDDPGRGDYAMKVDRRGYPQIFELKGSEVMVRAGSWNGFSLTGFANHIPDPVINAEFVMNEKEVYFKLDLINNSVFFRYVINPSGIGQSFDWVIQRSGWRVVHTGTPDTCANYALCGTNSICNISNNPVCECLRGYAPKNLKDWNVSDWNGGCTRRVSLNCDGGDGFKQYTGIKLPDTSSSWYNMTMDLEECKKTCLQNCSCVAYSNLDIRGEGSGCLIWFDQLLDMKQFPTGGQDLYVRVLASDLDHFRDEGRGSMGKKKLYGIAVGCALFVMSIMILGSTLIAKKRKLRNSRKEVMNIPTFGLSIIIKATDNFSIVNKLGEGGFGPVYKGTLEDGQELAVKRLSTKSGQGFEELRNEVELIAKLQHRNLVKLIGCCIEGEEKLLIYEYMPNKSLDHFIFDETHSKLLDWLKRWHIVHGIARGLVYLHIDSRLRIIHRDLKTSNILLDAFMNPKISDFGLARTFWDDQIEANTNKVVGTYGYMPPEYVTRGQFSMKSDVFSFGVIVLEIVSGKKNRIFSDPEYYLNLLGHAWRLWMQGRAMELLDECLKESYAESEVMRCIQVGLLCVQQRAEDRPDMSAIVSMLIGEKLLPQPKAPGFYTSSDFPRDLTSLHQRSIQFSQNEISETTLLGR 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01427 817 Pfam Protein tyrosine and serine/threonine kinase 501 770 IPR001245 GO:0004672|GO:0006468
Accr11g01427 817 CDD STKc_IRAK 505 770 - -
Accr11g01427 817 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 760 - -
Accr11g01427 817 SMART serkin_6 499 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01427 817 Gene3D - 19 154 IPR036426 -
Accr11g01427 817 Gene3D Hepatocyte Growth Factor 342 424 - -
Accr11g01427 817 Gene3D Phosphorylase Kinase; domain 1 463 574 - -
Accr11g01427 817 PIRSF SRK 1 817 IPR024171 GO:0004674
Accr11g01427 817 CDD PAN_AP_plant 341 425 - -
Accr11g01427 817 Pfam S-locus glycoprotein domain 216 324 IPR000858 GO:0048544
Accr11g01427 817 SMART blect_4 29 157 IPR001480 -
Accr11g01427 817 SMART ntp_6 346 425 IPR003609 -
Accr11g01427 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 778 - -
Accr11g01427 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 344 425 - -
Accr11g01427 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 188 IPR036426 -
Accr11g01427 817 Gene3D Transferase(Phosphotransferase) domain 1 575 776 - -
Accr11g01427 817 Pfam D-mannose binding lectin 70 183 IPR001480 -
Accr11g01427 817 CDD B_lectin 30 157 IPR001480 -
Accr11g01427 817 ProSiteProfiles Bulb-type lectin domain profile. 23 147 IPR001480 -
Accr11g01427 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 465 574 - -
Accr11g01427 817 SUPERFAMILY Protein kinase-like (PK-like) 478 770 IPR011009 -
Accr11g01427 817 ProSiteProfiles Protein kinase domain profile. 499 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01427 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 154 - -
Accr11g01427 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Accr11g01427 817 Pfam PAN-like domain 345 411 IPR003609 -
Accr11g01427 817 ProSiteProfiles PAN/Apple domain profile. 345 426 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01427 Accr-Chr11 36713533 36716963 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01427 371 800 Receptor kinase-like Gene Family AT4G23320 47.153 9.33e-119 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr11g01427 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01427 - - pcin:129299332 962.214