Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01404 ATGGCTGAGACGTCTGCAGCTAACGAAATCCACGAAGCTGTTCTTAATGTCTATGATGGCAAATCTAATGAAGGCTCCATCACCTTTGTCTCTATCCCTTTCTTACAGAAGTTGGTGGCAGAGTTGGTGGGGACATACTTTCTAATATTTTTAGGTGGAGTATCAGTTGTGGTGAACAACAACAACAACAATATCATAACACTTCCAGGGATTGCCATCGTTTGGGGTCTTCTGGTCATGGCTCTTGTCTACTCTCTTGGTCACATCTCTGGTGCCCATTTCAATCCTGCTGTCACTCTCGCTTTAGCTTCCACTAAGCGATTTCCCCTCAAACAGGTACCAGCTTATATATTAACTCATGTTGTAGGATGCCTTCTTGCAAGTGTGACTGTGAGACATATTTTCACAGGAAAACAGGACCAATTCATAGGAACATTAATAACTGGGTCATATCTTCGGGGCTTTGTGCTTGAATTCTTAGTCACCTTCTTCCTCATGTTTGTCGTCTCTGGTGTGGCAACTGATAGCAGAGCGACTGGTGAACTAGCTGGGATCGTCATAGGGGCAACCGTGATGCTTAATGTGTTGGTTGCCGGGCCGATAACCGGAACGTCAATGAACCCGGCAAGAAGCCTAGGGCCAGCCATTGTATGGCATGAGTACAGAGGAATATGGGTGTACATGACAGCACCGGTGGCAGGAGCAGTGGCGGGAGTATGGGTGTATAACATCATAAGGTCTACAGACAAGCCAAAACATGAGACCAAAAAGGGTGGCACTTCTTTTCCCAAAGCTTCAAGCTGTTGTTGCGGTGCCTCCAAGTGA 825 0.4642 MAETSAANEIHEAVLNVYDGKSNEGSITFVSIPFLQKLVAELVGTYFLIFLGGVSVVVNNNNNNIITLPGIAIVWGLLVMALVYSLGHISGAHFNPAVTLALASTKRFPLKQVPAYILTHVVGCLLASVTVRHIFTGKQDQFIGTLITGSYLRGFVLEFLVTFFLMFVVSGVATDSRATGELAGIVIGATVMLNVLVAGPITGTSMNPARSLGPAIVWHEYRGIWVYMTAPVAGAVAGVWVYNIIRSTDKPKHETKKGGTSFPKASSCCCGASK 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01404 274 SUPERFAMILY Aquaporin-like 30 254 IPR023271 -
Accr11g01404 274 Pfam Major intrinsic protein 30 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01404 274 ProSitePatterns MIP family signature. 93 101 IPR022357 -
Accr11g01404 274 Gene3D Glycerol uptake facilitator protein. 12 258 IPR023271 -
Accr11g01404 274 CDD MIP 36 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01404 274 PRINTS Major intrinsic protein family signature 36 55 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01404 274 PRINTS Major intrinsic protein family signature 157 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01404 274 PRINTS Major intrinsic protein family signature 225 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01404 274 PRINTS Major intrinsic protein family signature 75 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01404 274 PRINTS Major intrinsic protein family signature 112 131 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01404 274 PRINTS Major intrinsic protein family signature 188 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01404 274 PANTHER AQUAPORIN NIP2-1 24 253 IPR034294 -
Accr11g01404 274 NCBIfam MIP family channel protein 40 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01404 Accr-Chr11 35961605 35964907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01404 36 274 Major Intrinsic Protein MIP AT5G37820 56.485 1.90e-86 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01404 K09874 - gmx:100798526 334.724