Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01389 ATGATGAAACTCAAGCACCGTACACTCTGTTTCTCCTCTCATCACCTTCTTCTTCTTTTTCTTCTGATCTTCTCCTTATCTGATTCATCTCTTGCCGTCGATTTCATCTTCAACGGCTTCACCTCCCCCTCCGACGTCTTACTCTACAGCAACGCCACCGTTGAATCTGGAATCCTATCTCTCACTCATGACCAAGTTTTCTCTATTGGTCGTGCTCTTTACCCTCAAAAAATTCCCACCAAGAACCCTAATTCTTCATATGTACACCCTTTTTCTACTTCCTTCATTTTCGCCATGGCTCCTTATAAGGATGTTCTTCCTGGCCATGGCTTTGTCTTCCTCTTCACGCCTGTTCGAGGAATCCAAGGTACAAACTCTGCTCAACACTTGGGTTTCTTAAACTTCACCAACAATGGCGATTCCGGCAACCACGTGTTCGGCGTTGAGTTCGATGTGTTCATGAACCAAGAGTTCGATGACATAAACGACAATCACGTTGGGATCGATGTGAACTCTCTCAAATCCGTTGCTTCACACGACGCCGGGTTTTGGACGGAAGACCAAAACGACAAATCGTTCCAAGAATTGAGGCTAAACGACGGTGAGAACTACCAGGTTTGGATTGATTACCAAGATTCTCTCATTAACGTGACTATGGCTAAAGTTGGTACAAAACGACCTCGTAGGCCATTGTTGAGTGTACCGTTGAACTTATCTGAGGTTTTCGAAGATGAAATGTATGTTGGATTTACAAGTGCCACAGGGCAATTAGTTCAAAGTCACAAGATTTTAGCTTGGAGCTTCAGTAATTCAAATTTTTCACTCAGCGAAGCGTTAATTACTTCTGGATTACCTTCTTTTGTTCTTCCAAAAGATTCAATCTTCAAATCTACAGGGTTTATCGCAGGATTCACAATTGGGGTTTTTTTCATACTCTGTTTTATCGTTCTGGTGACTCTGTTTTTAATACAGAGGAGACGAAGGAAAGCGAGGGAAAGAGAAGCAATGGAGGATTGGGAATTAGAGTACTGGCCACACAGAATACCCTACGAAGAAATCGAATCAGCAACAAAAGGATTCTCCGAGGAAAACGTGATCGGAATCGGAGGAAACGGCAAGGTATACAAAGGAATCCTAGGAGAATCAGAAATCGCAGTAAAACGAATCTCTCATGAGAACAACGGAATGAGAGAATTCCTAGCAGAAATCGCCAGTTTGGGAAGGCTAAAACACAGAAACCTCGTAAAATTACGAGGATGGTGTAAGAAAGACACAGGAAATTTCTTACTGATCTACGACTACATGGAAAACGGGAGTTTAGAAAAAAGGGTATTTGAAAACGAGGAAGACGACAAGATTTTGAACTGTGAACAGAGGATGAGGATTTTGAAGGATGTGGCTAGTGGGGTATTGTACTTGCATGAAGGTTGGGAAGTGAAAGTTGTTCACAGAGATATTAAAGCGAGTAATGTGCTGTTAGATAAGGAACTTAATGGAAGGTTGGGAGATTTTGGTCTAGCTTTAATGCATAACAATAATGGTGAAGTAGCTGGAACCACTAAAGTGGTTGGGACAGTGGGTTACATGGCACCAGAAATGATGAAGACAGGAAGAGCTTCTACTCAGAGTGACGTTTACATGTTTGGAATCTTGGTTTTGGAGGTTATGTGTGGAAGAAGACCCATTGAAGAAGGAAAGCCATCCTTGGTGGAGTGGGTGTGGCAACTTAAAGCACAAGGACAAATATTAAGTGCAATGGATGAGAGAATGAGGGCAAAAGGAGAAGTGAATGAACAACAAGTAGAAACACTTCTGAACTTGGGATTGTTATGTGCTTATCCTGATCCAAAAGCCAGGCCAACAATGAGACAAGCATTGAAGGTTTTAGAGGGAAAGCATAATAATACTGAAGATGGAGAGTTCGAAAATGAAGACATTGATACCTATTTGCTTAAGCACATCAGATCACCAAGAGACTTATGGCCTGAGTATTCTCATTATTTAAATTTCTCTCCTCACCCAACATTTGAAGATGTTAGATTCACTACTGCTCATTCTTTCTCTACGTCTCACGGCATTTCGTCTACCTCTATTTTTGAGGGGAGATGA 2109 0.4177 MMKLKHRTLCFSSHHLLLLFLLIFSLSDSSLAVDFIFNGFTSPSDVLLYSNATVESGILSLTHDQVFSIGRALYPQKIPTKNPNSSYVHPFSTSFIFAMAPYKDVLPGHGFVFLFTPVRGIQGTNSAQHLGFLNFTNNGDSGNHVFGVEFDVFMNQEFDDINDNHVGIDVNSLKSVASHDAGFWTEDQNDKSFQELRLNDGENYQVWIDYQDSLINVTMAKVGTKRPRRPLLSVPLNLSEVFEDEMYVGFTSATGQLVQSHKILAWSFSNSNFSLSEALITSGLPSFVLPKDSIFKSTGFIAGFTIGVFFILCFIVLVTLFLIQRRRRKAREREAMEDWELEYWPHRIPYEEIESATKGFSEENVIGIGGNGKVYKGILGESEIAVKRISHENNGMREFLAEIASLGRLKHRNLVKLRGWCKKDTGNFLLIYDYMENGSLEKRVFENEEDDKILNCEQRMRILKDVASGVLYLHEGWEVKVVHRDIKASNVLLDKELNGRLGDFGLALMHNNNGEVAGTTKVVGTVGYMAPEMMKTGRASTQSDVYMFGILVLEVMCGRRPIEEGKPSLVEWVWQLKAQGQILSAMDERMRAKGEVNEQQVETLLNLGLLCAYPDPKARPTMRQALKVLEGKHNNTEDGEFENEDIDTYLLKHIRSPRDLWPEYSHYLNFSPHPTFEDVRFTTAHSFSTSHGISSTSIFEGR 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01389 702 SUPERFAMILY Concanavalin A-like lectins/glucanases 19 271 IPR013320 -
Accr11g01389 702 FunFam L-type lectin-domain containing receptor kinase S.4 435 642 - -
Accr11g01389 702 Pfam Legume lectin domain 33 272 IPR001220 GO:0030246
Accr11g01389 702 ProSiteProfiles Protein kinase domain profile. 360 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01389 702 PANTHER - 52 633 - -
Accr11g01389 702 FunFam L-type lectin-domain containing receptor kinase S.4 31 276 - -
Accr11g01389 702 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 322 434 - -
Accr11g01389 702 Gene3D - 32 278 - -
Accr11g01389 702 SUPERFAMILY Protein kinase-like (PK-like) 337 632 IPR011009 -
Accr11g01389 702 CDD lectin_legume_LecRK_Arcelin_ConA 33 266 IPR001220 GO:0030246
Accr11g01389 702 Gene3D Phosphorylase Kinase; domain 1 321 434 - -
Accr11g01389 702 SMART serkin_6 360 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01389 702 Pfam Protein kinase domain 361 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01389 702 ProSitePatterns Protein kinases ATP-binding region signature. 366 387 IPR017441 GO:0005524
Accr11g01389 702 Gene3D Transferase(Phosphotransferase) domain 1 435 653 - -
Accr11g01389 702 CDD STKc_IRAK 366 631 - -
Accr11g01389 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01389 Accr-Chr11 34844218 34847005 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01389 32 582 Receptor kinase-like Gene Family AT4G04960 65.766 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Accr11g01389 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01389 - - gmx:100804391 981.474