Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01387 ATGGAGGAAAACCCTAGTTCATCATCCAGAACTACTACTGACAGAAAATTCATAGAGAGGAATCGGAGATATCAAATGAAGGCCCTCTACTCTAAGCTCAAATCTCTTGTTCCTCATCAAGCTCCAAGGGAGGCTATTCCACTACCTAATCAGTTAGAGGAAGCAACAAATTACATCAAGAAGTTACAGATGAAGTTGGAGAGAATGAAGGAGAAGAAGGGCAACATAATTGCAACTAATAATCAAAGGTCAAATTTTATCAAATATAGAAATATGATTAATAAATCATCAAAATCAGCGACATGGCTTGAGATCAGAGAAGTGGGCACTATTGCCTTACAAGTTGTTCTGAGGACTGAATTGGATAGTGGGTTTTCGTTCACTGATATCATTCGGCTTCTTCATGAAGAAGGAGCAGATATTGTTAACGCCAATTACACAGTTGTTGAGGATGTAGTTATTCATACAATACACTGTGAGGTAGAGGAAGCTGTCAAAGTTGCTGCAATGATATCTGAGAGATTAAGGATATTCTAG 537 0.3799 MEENPSSSSRTTTDRKFIERNRRYQMKALYSKLKSLVPHQAPREAIPLPNQLEEATNYIKKLQMKLERMKEKKGNIIATNNQRSNFIKYRNMINKSSKSATWLEIREVGTIALQVVLRTELDSGFSFTDIIRLLHEEGADIVNANYTVVEDVVIHTIHCEVEEAVKVAAMISERLRIF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01387 178 Gene3D - 2 95 IPR036638 GO:0046983
Accr11g01387 178 Coils Coil 52 79 - -
Accr11g01387 178 Pfam Helix-loop-helix DNA-binding domain 17 63 IPR011598 GO:0046983
Accr11g01387 178 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 10 174 - -
Accr11g01387 178 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 11 78 IPR036638 GO:0046983
Accr11g01387 178 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 10 62 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01387 Accr-Chr11 34748451 34750586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01387 1 175 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 42.623 1.47e-41 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr11g01387 HLH 9.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01387 - - gmx:100784418 180.259