Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01382 ATGGGACAGCTAAGAAATAGTGTCCACTATGGAATGCCAAATTGGGAATCAGCTGATGATCAGAGCGAAAGGAAAAGGAAAGGAGCAATGATGAGCAAAATTGCTAGGAACATAAGAAAACAGGCCAGACAAAGAACTAGAAGCTCATCAACTTCTAGGGGTTCTAACTCAATCTTGGAACAGGCAAGCAAGGAGGACATTATTGTTCATAAGAATGATCAGATTCATAGTACAATTCCCAGTACTCTACACGCTCTTGATGGGAAGAAACTCAAAAAATTGTTCACCAAAAAGTTGAAAACCAGTGATGTTGGCTTTATGGGTCGTATTGTCCTTCCCAAGAAGGAAGCTGAGAAGAACCTTCCGGCTCTGTCCAACAAGGAAGGCATAGAACTTGTAGTTAAGGATGTATGTACGAACCAACAATGGAGCATGAAATACAAGTACTGGTGTAATAATAAAAGTAGAATCTATGTTCTTGAAAAGACAGGGAATTTTGTGAAGTATTATCAATTGCAAATTGATGATTCTATCACACTTTTTGAGGATGAATTGAAAAATCTTTATGTGCTACCAACAAAGGGTCAAACACCAGAAGTAGCTGATGATCAACGGCTCTTTTCAATAATCAAGGAAGAGGAGAAAAGCAACGACATTGATATACCATACCGTCAAGAAAAAGATTATGATAATGAAGAGGAAACTTGTTTTGATAAGTTAATTGATGAGATCCTACTCTACCAAAAGGAGCAAGAATCTTCTTCACACAAGTACAATGCTGTTGGACGCTCATCGTCAAATACAGAAGTACTTTACAGTACTAATAATGCGTCACAAGAGGTTTCATCACTGCCCAACATGAAGAACAGGTGA 873 0.3814 MGQLRNSVHYGMPNWESADDQSERKRKGAMMSKIARNIRKQARQRTRSSSTSRGSNSILEQASKEDIIVHKNDQIHSTIPSTLHALDGKKLKKLFTKKLKTSDVGFMGRIVLPKKEAEKNLPALSNKEGIELVVKDVCTNQQWSMKYKYWCNNKSRIYVLEKTGNFVKYYQLQIDDSITLFEDELKNLYVLPTKGQTPEVADDQRLFSIIKEEEKSNDIDIPYRQEKDYDNEEETCFDKLIDEILLYQKEQESSSHKYNAVGRSSSNTEVLYSTNNASQEVSSLPNMKNR 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01382 290 ProSiteProfiles B3 DNA-binding domain profile. 95 194 IPR003340 GO:0003677
Accr11g01382 290 SUPERFAMILY DNA-binding pseudobarrel domain 94 191 IPR015300 -
Accr11g01382 290 CDD B3_DNA 102 191 IPR003340 GO:0003677
Accr11g01382 290 Pfam B3 DNA binding domain 95 181 IPR003340 GO:0003677
Accr11g01382 290 MobiDBLite consensus disorder prediction 1 57 - -
Accr11g01382 290 Gene3D - 84 201 IPR015300 -
Accr11g01382 290 SMART B3_2 95 196 IPR003340 GO:0003677
Accr11g01382 290 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 25 198 IPR044800 GO:0003700
Accr11g01382 290 MobiDBLite consensus disorder prediction 252 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01382 Accr-Chr11 34613135 34615823 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01382 85 190 B3 DNA Binding Superfamily AT1G28300 59.434 1.30e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr11g01382 B3 1.2e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01382 K09287 - qsu:111993837 153.68