Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01371 ATGAGTTACCTTAGCTTACCAAGCAGCTCGTCGTCGTCATCTCGGAGGACCTGGAGATACGAAGTGTTTCTAAGTTTCAGAGGTGAGGACACTCGCAACAACTTCACTGGCCATCTTTATGAAGCTCTTCAACGAAAAGGTATACACACCTTCAAGGATGATATAAAGCTCCCGAGAGGAAAACAAATTCGACCAGAACTCCTCACGGCAATTGAACAATCCCAGATTTCAGTCGTCGTCTTATCCAAAAACTATGCGAATTCGTCATGGTGCTTGGACGAACTGGTAGAAATATGCAAGGGAATCAATAAACCGGGATATACTGTTCTACCAATTTTCTACCATGTGAATCCATCTGATATACGGAAACAGGAGGGGCCTTTCAAAGAAGCCTTTGATAAATATGAACAAAACTCAAGTCTTGAGATACCAAAATGGAAGTCGGCTTTGGAAAACGTAGCCGATCTCGCTGGTCATCATGTAAATGGGAACAAATCAGAGTCAGATATTATTGAAAAAATCGTTATGGATGTAACCGATAGACTGAAACATAAATTCTCAAGTCTGGCTGATGATCTAGTGGGAATGCAATCTCGTGTAGAAGCCTTTGTGAATCTTCTAAATCTAGATTCATCGGATGATGATGTTCAATTTGTGGGGATTTTGGGAATGCCCGGAGTAGGGAAGACTACTCTTGCTACAGTTGTTTACGATATAATCTCCCGCGACTTTGAGGCTTGCTGTCTTCTTGAAGATGTAAGTAAACACAAGGGTCCTGATGGTCTTGTCCGTTTACAAACACAACTTCTTTCTGAAACAGTGGGGATAGATCAAGAGGTTTGGAATAAACTCAAAGGAATAGAGTTAATAAGCAATAGGCTTCGCAAGTGTAAAACTCTTATTGTTGTTGATAATGTTGATTGTGTAGATCAATTGGAGAAATTGGTTGGAAAGCCAGAGTGGTTTGGTCCTGGGAGTAGAATCATCATAACAACTAGAGATGAGCAAATCCTAGAGCGTCATGGAGTGCATAATGATAAAGTTTACAAGGTTGAACTACTGACTAATGAAGAAGCTCTTGAACTACTTTGTAGAAGAGCCTTCAAAAGTGATCATCCTGGTGATGGATTTGAAGAGTTGACTTGTAAACTTCTACAGTATGCTAAATTACTTCCATTAGCAATCAAAGTGTTAGGTTCCTCTTTGGTTAACCGCAAACAATCAGTGTGGAAAGCACAATTGGAAAGATTGAAAGAAAATCCCAACCAAGAGGTTATGGGAGTCCTGGAAACGAGTATTGGTTTACTTGAACCAGAGGACCAGGATATATTTGTAGATGTTGCTTGTTTCTTCGAGGGAGTAGATGAGAATTATGCCAAAAAAATTCTGGACCATTGTGGATTTAATCCTGAGCTTGGAATAGAAAATCTGTGTAAAAAATCACTCATAGCCATTGTCAATGGAACACTTTGGATGCATGATTTGCTCAAAGAAGTAGGGAGGAAAATTGCAAGACGAGAATTTCCTCGAGAGCCAGGAAAGTGGAGCAGACTCTGGTTGTACAAAGATCTTCAAGCTGTAAAGACAGCAACAGAAAAAGTTGAAGCCATTGTGTTGAAAGAGAAAGATGTAGATGTGGATGAGATGCTTCCATTGAGGGCTGAAGCTTTATCCCAAATGACCCGCCTTAGGCTAATCATATTTCCTTCAATGAAATTTGCAGGGAAGTTGAACAATCTTTCCGATGGCTTGAGATTTCTTTCCTGGAAGAAATTTCCTTTCAGTTGTTTACCATCAAGTTTTGAACCAACTAAACTTGTTGAATTGATCTTGATTGATAGCAATATAAGACTACTATGGGAAGGGGAAAAGGCTTTGCCAGAGCTGAAGATCATAGATTTACGTGGCTCGAAAAATCTAATAAAGACACCAAATCTTAAAGGAGTGAAAAATCTTGAGAAGTTGGATCTTGAAGGATGTAGTGGATTATTAGAGGTTGACGCTTCTATTGAAAATCTTGGAAAGCTGAAAATCCTGAATCTGAGAGACTGTGATCGTCTAATCAGTATCCCAAACACCTTATTTCTTTCAACTTCTCTTAAAACTCTGAACGTTCCAGGTTGTTTAATACTTGCACAGCGTTTGAACTTCGGAAGTCCTCCATAG 2166 0.3957 MSYLSLPSSSSSSSRRTWRYEVFLSFRGEDTRNNFTGHLYEALQRKGIHTFKDDIKLPRGKQIRPELLTAIEQSQISVVVLSKNYANSSWCLDELVEICKGINKPGYTVLPIFYHVNPSDIRKQEGPFKEAFDKYEQNSSLEIPKWKSALENVADLAGHHVNGNKSESDIIEKIVMDVTDRLKHKFSSLADDLVGMQSRVEAFVNLLNLDSSDDDVQFVGILGMPGVGKTTLATVVYDIISRDFEACCLLEDVSKHKGPDGLVRLQTQLLSETVGIDQEVWNKLKGIELISNRLRKCKTLIVVDNVDCVDQLEKLVGKPEWFGPGSRIIITTRDEQILERHGVHNDKVYKVELLTNEEALELLCRRAFKSDHPGDGFEELTCKLLQYAKLLPLAIKVLGSSLVNRKQSVWKAQLERLKENPNQEVMGVLETSIGLLEPEDQDIFVDVACFFEGVDENYAKKILDHCGFNPELGIENLCKKSLIAIVNGTLWMHDLLKEVGRKIARREFPREPGKWSRLWLYKDLQAVKTATEKVEAIVLKEKDVDVDEMLPLRAEALSQMTRLRLIIFPSMKFAGKLNNLSDGLRFLSWKKFPFSCLPSSFEPTKLVELILIDSNIRLLWEGEKALPELKIIDLRGSKNLIKTPNLKGVKNLEKLDLEGCSGLLEVDASIENLGKLKILNLRDCDRLISIPNTLFLSTSLKTLNVPGCLILAQRLNFGSPP 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01371 721 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 711 IPR044974 GO:0006952
Accr11g01371 721 PRINTS Disease resistance protein signature 293 307 - -
Accr11g01371 721 PRINTS Disease resistance protein signature 388 402 - -
Accr11g01371 721 PRINTS Disease resistance protein signature 647 663 - -
Accr11g01371 721 PRINTS Disease resistance protein signature 218 233 - -
Accr11g01371 721 SMART till_3 19 156 IPR000157 GO:0007165
Accr11g01371 721 Gene3D - 353 436 IPR042197 -
Accr11g01371 721 Gene3D - 183 349 IPR027417 -
Accr11g01371 721 Gene3D Ribonuclease Inhibitor 548 715 IPR032675 -
Accr11g01371 721 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 446 IPR027417 -
Accr11g01371 721 SUPERFAMILY "Winged helix" DNA-binding domain 424 524 IPR036390 -
Accr11g01371 721 Gene3D - 12 182 IPR035897 -
Accr11g01371 721 SUPERFAMILY L domain-like 542 710 - -
Accr11g01371 721 Pfam NB-ARC domain 213 421 IPR002182 GO:0043531
Accr11g01371 721 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 158 IPR035897 -
Accr11g01371 721 ProSiteProfiles TIR domain profile. 18 182 IPR000157 GO:0007165
Accr11g01371 721 Pfam TIR domain 20 193 IPR000157 GO:0007165
Accr11g01371 721 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01371 Accr-Chr11 34329806 34333036 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01371 20 708 WRKY Transcription Factor Family AT4G12020 31.285 2.25e-79 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01371 - - pcin:129315185 1055.05