Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01366 ATGAGTTACCTTAGCTTACCAAGCAGCTCGTCGTCGTCATCTCGGAGGACCTGGAGATACGAAGTGTTTCTAAGTTTCAGAGGTGAGGACACTCGCAACAACTTCACTGGCCATCTTCATAAAGCTCTTCAACGAAAAGGTATACACACCTTCAAGGATGATAAAAATCTCCCGAGAGGAGAACAAATTCGACCAGAACTCCTCAGAGCAATTGAACAATCCCAGATTTCAGTCGTCGTCTTATCCAAAAACTATGCGAATTCGTCATGGTGCTTGGACGAACTGGTAGAAATTTGCACGGTAATCAATAAACCGGGATACACTGTTCTACCAGTTTTCTACCATGTGGATCCATCTCATGTACGGAATCAGAGGGGGCATTTCAAAGAAGCCTTTGACAAACATCAGCAAAACTCAAGTCGTAAGATACCAGAATGGAAGTCAGCTTTGGAAAAAGTAGCCGGTCTCGCTGGTCATCATGTAAATGGGAACAAATCAGAGTCAGATATTATTGAAGAAATCGTTATGGATGTAACCCATAGACTAAAACATAAATTCTCAAGTCTGGCTGATGATCTAGTGGGGATGCAATCTCGTGTAGAAGCCTTTGTAAAGCTTCTAAATCTAGATTCATCGGATGATGATGTTCGATTTTTGGGGATTTTGGGAATGCCCGGAGTAGGGAAAACAACTCTTGCTGTAGTTGTTTACAATAGAATCTCCTACCACTTTGAAGCTTGCTGTCTTCTTCATGATGTAAGTAAAGTTCACAAGGGTCCTGGTCTTGTCAGTTTACATCAACAACTTCTTTTTGAAACAGTGGGGATAGATCCTAAAGAGGTTTGGGAGGAACACAAAGGAAAAAAATTAATGAGCACTAGGCTTCGCAATTGTAAAACTCTTATTGTTGTTGATAATGTTGATAGTGCAGATCAATTGGAGAAATTGGTTGGAAAGCCTGAGTGGTTTGGTCCCGGCAGTAGAATCATCATAACAACTAGAGATAAGCAAATCCTAGAGCATCATGGAGTGCATAAAGATAAAGTTTACGAGGTTGAACTACTGACTGATGTAGAAGCTCTTGAACTACTTTGTAGAAGAGCCTTCAAAAGTGATGATCCCCCTGATAAGGAATTTGAAAAGTTAACTTGTAAACTTTTACAGTATGCTAAATCACTTCCATTAGCAATCAGAGTGTTAGGTTCCTCTTTGTTTAATTGCGAACAATCAGAGTGGGAGGCACAATTGGAAAGATTGGAAGAAAATCCCAACGAAGAGGTTATGGGAGTCCTGGAAACGAGTATTGGTTTGCTTCAACCAATGGACCAGGATATATTTGTTGACGTCGCTTGTTTCTTCGAGGGAGAAGAAGAGAATTATGCCAGAAAAATTCTATGCCATTGTGGATTTTATCCTGAGCGTGGAATAGGAGATCTGCGTAGAAAATCACTCATAGTCATTGTCAATGGAACACTTTGGATGCATGATTTGCTCAAAGAATTGGGGAGGAAAATTGCAAGAGGAGGATTTCCTCAAGAGCCAGCAAAGTGGAGCAGACTCTGGTTGTACAAAGATCTTCAAGCTGTAAAGACAGGAACAGAAAAAGTTGAAGCCATTGTGTTGAAGGAGGAAGATGTAAATGTGGATGAGATGCTTCCATTGAGGGCTGAAGCTTTATCCCAAATGACCCGCCTCAGGCTAATTATATTTCCTTCTATGAAATTTGCAGGGAAGTTGAACAATCTTTCCGATAGCTTGAGATTTCTTTCCTGGAAGAAATTTCCTTTCAGTTGTTTACCATCAAGTTTTGAACCAACTAAACTTGTTGAATTGATCTTGATTGATAGCAATATAAGACTACTATGGGAAGGCGAAAAGGCTTTGCCAGAGTTGAAGATCATAGATCTACGTGGCTCTAAAAATCTAATAAAGACACCAAATCTCAAAGGAGTAAAAAATCTTGAGGAGTTAAATCTTGAAGGATGTAGTGGATTATTAGAGGTTGATGCTTCTATTGGAAATCTTAGAAAGCTAACAATCCTAAATTTGAGACACTGTGATCGTCTAATCAGCATCCCAAACACCTTATTTCTTTCAACTTCTCTTGAAACTCTGAACCTTCCAGGTTGTTTAATACTTGCACAGCGTTTGAACTTCGGAAGTCCTCCATAG 2172 0.3987 MSYLSLPSSSSSSSRRTWRYEVFLSFRGEDTRNNFTGHLHKALQRKGIHTFKDDKNLPRGEQIRPELLRAIEQSQISVVVLSKNYANSSWCLDELVEICTVINKPGYTVLPVFYHVDPSHVRNQRGHFKEAFDKHQQNSSRKIPEWKSALEKVAGLAGHHVNGNKSESDIIEEIVMDVTHRLKHKFSSLADDLVGMQSRVEAFVKLLNLDSSDDDVRFLGILGMPGVGKTTLAVVVYNRISYHFEACCLLHDVSKVHKGPGLVSLHQQLLFETVGIDPKEVWEEHKGKKLMSTRLRNCKTLIVVDNVDSADQLEKLVGKPEWFGPGSRIIITTRDKQILEHHGVHKDKVYEVELLTDVEALELLCRRAFKSDDPPDKEFEKLTCKLLQYAKSLPLAIRVLGSSLFNCEQSEWEAQLERLEENPNEEVMGVLETSIGLLQPMDQDIFVDVACFFEGEEENYARKILCHCGFYPERGIGDLRRKSLIVIVNGTLWMHDLLKELGRKIARGGFPQEPAKWSRLWLYKDLQAVKTGTEKVEAIVLKEEDVNVDEMLPLRAEALSQMTRLRLIIFPSMKFAGKLNNLSDSLRFLSWKKFPFSCLPSSFEPTKLVELILIDSNIRLLWEGEKALPELKIIDLRGSKNLIKTPNLKGVKNLEELNLEGCSGLLEVDASIGNLRKLTILNLRHCDRLISIPNTLFLSTSLETLNLPGCLILAQRLNFGSPP 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01366 723 SUPERFAMILY L domain-like 541 712 - -
Accr11g01366 723 SMART till_3 19 156 IPR000157 GO:0007165
Accr11g01366 723 Gene3D Ribonuclease Inhibitor 517 722 IPR032675 -
Accr11g01366 723 Pfam TIR domain 20 193 IPR000157 GO:0007165
Accr11g01366 723 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 713 IPR044974 GO:0006952
Accr11g01366 723 Gene3D - 181 349 IPR027417 -
Accr11g01366 723 Pfam NB-ARC domain 209 425 IPR002182 GO:0043531
Accr11g01366 723 PRINTS Disease resistance protein signature 218 233 - -
Accr11g01366 723 PRINTS Disease resistance protein signature 390 404 - -
Accr11g01366 723 PRINTS Disease resistance protein signature 294 308 - -
Accr11g01366 723 PRINTS Disease resistance protein signature 626 642 - -
Accr11g01366 723 Gene3D - 354 438 IPR042197 -
Accr11g01366 723 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 448 IPR027417 -
Accr11g01366 723 ProSiteProfiles TIR domain profile. 18 182 IPR000157 GO:0007165
Accr11g01366 723 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 158 IPR035897 -
Accr11g01366 723 Gene3D - 12 180 IPR035897 -
Accr11g01366 723 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01366 Accr-Chr11 34183761 34186814 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01366 20 710 WRKY Transcription Factor Family AT4G12020 30.823 4.21e-77 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01366 - - pcin:129315185 1086.63