Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01364 ATGGAAACAAGCAGAGCTGAGGGAAAGAGAAGCTCGAGGCACAAGAAAGAGGAAGAAGAAGAGGAAGATGAAGAGGAAGCCGACGGCGATGAAGAAGAGACAGAGAGTGAAGTTGGGTCTGGAGAAGAACATGGCAGAAAGAGAAGGGTTATATCAAATTCAGACAACAGGAGAGGCCCCAAACACGGAAGCTCCTCGGCGGTGCCACCGTGTTGTCAGGCCGATGATTGCCGGACTGATCTGAGCGGCGCCAAACAGTATCATCGGCGGCACAAGGTCTGTGAGTACCACGCTAAAGAACCGGTCGTACTCATTTCAGGGAATGAACAACGATTTTGCCAGCAATGTAGCCGGTTTCATGAGCTTTCTGAGTTTGACAACTCAAAACGGAGTTGTAGAAAACGTTTGGCGGGGCATAATGAGAGAAGGCGAAAGGTTTCATCTGATTATCATGGAGAAGGTTATCATTAA 471 0.4862 METSRAEGKRSSRHKKEEEEEEDEEEADGDEEETESEVGSGEEHGRKRRVISNSDNRRGPKHGSSSAVPPCCQADDCRTDLSGAKQYHRRHKVCEYHAKEPVVLISGNEQRFCQQCSRFHELSEFDNSKRSCRKRLAGHNERRRKVSSDYHGEGYH 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01364 156 MobiDBLite consensus disorder prediction 142 156 - -
Accr11g01364 156 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 26 145 IPR044817 GO:0003677
Accr11g01364 156 SUPERFAMILY SBT domain 69 150 IPR036893 GO:0003677|GO:0005634
Accr11g01364 156 MobiDBLite consensus disorder prediction 137 156 - -
Accr11g01364 156 MobiDBLite consensus disorder prediction 1 73 - -
Accr11g01364 156 MobiDBLite consensus disorder prediction 39 56 - -
Accr11g01364 156 FunFam Squamosa promoter-binding-like protein 14 63 133 - -
Accr11g01364 156 MobiDBLite consensus disorder prediction 19 38 - -
Accr11g01364 156 Pfam SBP domain 72 145 IPR004333 GO:0003677
Accr11g01364 156 MobiDBLite consensus disorder prediction 1 18 - -
Accr11g01364 156 Gene3D - 63 133 IPR036893 GO:0003677|GO:0005634
Accr11g01364 156 Coils Coil 13 35 - -
Accr11g01364 156 ProSiteProfiles Zinc finger SBP-type profile. 69 146 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01364 Accr-Chr11 34053956 34056391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01364 58 154 SBP-box Gene Family AT3G15270 63.265 9.81e-39 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Accr11g01364 SBP 9.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01364 - - qsu:112032600 176.022