Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01357 ATGACCACCATGGTTATGGCTTCCCACAGAGCTTTCTTCTTACTCTTCTCCTTTCTTCTTCGCTTCCTCTTTTCTGAATCACAGACCACTTTTCTCTTTAACGCTTGCTCTTCCACCAAAACCTTCACTGCAAACAGTTCCTTTCAATCCGACCTCACTACCCTCCTCTCTTCCTTATCTTCCGCCAACACCGACTTTTACAACACCACCGTGGCTGCTGGTGGCGGCGGCGAAGACACCATATACGGTCTCTTCATGTGTCGGGGTGATGTCACCCTCCAGGTTTGCCGCCAATGCGTTGGTACAGCAGTCCAACGAGTACCTTCCATGTGTGGATTTTCCAAGGAGGCCATAATCTGGTACGACGAGTGCTTGCTTCGCTACTCAAACCGGTCCTTCTTCTCCACTGTCGATACGAGCCCCCAAACTGGCTTTCCCCTCTGGAACACCGGCAATGTTTCCGGCCAAGCGAACTTCAAGAGTATTATGTTCACCACCATGAACAAGACAGCGGATGAGGCGGCCGCGGCGAAACATGGTTTGGGAGAGAAGATGAAGAAGTATGCGACAAAAGAAGCTAATATTTCGGGGTCTCATCAAACTCTGTATTCTTTGGCTCAGTGCACGCCGGACCTTTCGCCCGGAGATTGTAGAAAGTGTCTGGATGGTGCAATTGGGCGGCTTTCATCGTGTTGTGAGGGTATGGCCGGAGGAAGAGTTCTGTGTCCGAGTTGTAACGTTCGTTATGAAGTGTTTCGTTTCTATCGTTCTGACGACCAGCTTGTTGGGACGCCGACGTCAATTTTACCATCTCCTCCGACATTGTCCTCAGATCCCAGAGTGAAAGGGAAAGGCAAATCAGCTCCAATTATTGTGATAGTTGTGGTTTGTATTGTTGGTACGGCAATAGTTTTTGGTTTCGCCTACTACCTCTTAAAGCATCGCATGAAGAAGAGTCGTAGGGCTGTTCTCAGGCAAAAATACTTTGGAAGTGAAGGCACCAGTTTAGAGCCTCTGGAATTCAATTTGGCTACTATTGAATCTGCGACAAATAAATTTTCAGAGGAAAGTAGATTAGGCAAAGGTGGCTTTGGACAAGTTTACAAGGGTATTCTTTCAAACGGCCAAAATATAGCTGTGAAGAGACTTTCAAAAGGTTCTGGCCAAGGTGCAGAAGAATTCAAGAATGAAGTTTTATTTATAGCCAGGCTCCAGCACATAAATTTGGTGACATTATTAGGATTTTGTATAGAAGGGCAAGAAAAAATACTTGTCTATGAATATGTTCCCAACCGAAGCTTGGACTATTTTCTATTTGGTTCTGGCAAAAGCAAAGTACTAAATTGGTTGGAACGATGTAAAATCATAGGAGGAGTTGCTCGAGGAATTCTTTATCTTCATGACCATTCTCGCCTTAAAATTATACATCGTGATCTCAAACCCAGTAATATTTTATTAGATGATGAAATGAATCCAAAAATTTCAGATTTTGGATTAGCTAAAATGGTTGCTATTAGTGAAAATGAGGGAAAGACCAATAGAATTGCCGGAACATATGGCTATATGTCTCCAGAATATGCAATGTTTGGAAAATATTCTGAAAAATCAGATGTTTTTAGTTTTGGAATTATAACTTTACAAATCATCAGTGGAAGGAAGAATACAAATTGTCATGAACAATCAAAAGATGCATATAGTCTCATAAGCTATGTTTGGAATCAATGGAGGGATGAAAAGTTTCTGGAGATACTGGATCCAAATCTGAAAGAATTCGGATCATATAATGAAGTGACAAAATGCATCCAGATTGGTTTATTATGTGTTCAAAAGAATCCAGACTTAAGGCCTTCCATGGCCAAAGTTGTTCATTATCTTACTAATGATTCTATTCAATTGCCATTTCCACAAGAACCTGCATTTCTTCTACTTGGTCCAATGGAGCCATCCACTAGTGGATCTGCAAGTAACGAATCATACTCTATTAATGAAGTCTCTGTGAGTGAATTCCTTCCTCGCTAG 2019 0.422 MTTMVMASHRAFFLLFSFLLRFLFSESQTTFLFNACSSTKTFTANSSFQSDLTTLLSSLSSANTDFYNTTVAAGGGGEDTIYGLFMCRGDVTLQVCRQCVGTAVQRVPSMCGFSKEAIIWYDECLLRYSNRSFFSTVDTSPQTGFPLWNTGNVSGQANFKSIMFTTMNKTADEAAAAKHGLGEKMKKYATKEANISGSHQTLYSLAQCTPDLSPGDCRKCLDGAIGRLSSCCEGMAGGRVLCPSCNVRYEVFRFYRSDDQLVGTPTSILPSPPTLSSDPRVKGKGKSAPIIVIVVVCIVGTAIVFGFAYYLLKHRMKKSRRAVLRQKYFGSEGTSLEPLEFNLATIESATNKFSEESRLGKGGFGQVYKGILSNGQNIAVKRLSKGSGQGAEEFKNEVLFIARLQHINLVTLLGFCIEGQEKILVYEYVPNRSLDYFLFGSGKSKVLNWLERCKIIGGVARGILYLHDHSRLKIIHRDLKPSNILLDDEMNPKISDFGLAKMVAISENEGKTNRIAGTYGYMSPEYAMFGKYSEKSDVFSFGIITLQIISGRKNTNCHEQSKDAYSLISYVWNQWRDEKFLEILDPNLKEFGSYNEVTKCIQIGLLCVQKNPDLRPSMAKVVHYLTNDSIQLPFPQEPAFLLLGPMEPSTSGSASNESYSINEVSVSEFLPR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01357 672 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Accr11g01357 672 SUPERFAMILY Protein kinase-like (PK-like) 336 655 IPR011009 -
Accr11g01357 672 Pfam Protein kinase domain 354 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01357 672 ProSiteProfiles Gnk2-homologous domain profile. 141 254 IPR002902 -
Accr11g01357 672 SMART serkin_6 353 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01357 672 FunFam cysteine-rich receptor-like protein kinase 10 429 632 - -
Accr11g01357 672 ProSiteProfiles Protein kinase domain profile. 353 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01357 672 ProSiteProfiles Gnk2-homologous domain profile. 30 133 IPR002902 -
Accr11g01357 672 FunFam Cysteine-rich receptor-like protein kinase 10 314 428 - -
Accr11g01357 672 Gene3D Phosphorylase Kinase; domain 1 314 428 - -
Accr11g01357 672 Pfam Salt stress response/antifungal 154 250 IPR002902 -
Accr11g01357 672 Pfam Salt stress response/antifungal 36 130 IPR002902 -
Accr11g01357 672 Gene3D - 143 254 IPR038408 -
Accr11g01357 672 Gene3D - 28 133 IPR038408 -
Accr11g01357 672 Gene3D Transferase(Phosphotransferase) domain 1 429 632 - -
Accr11g01357 672 FunFam Cysteine-rich receptor-like protein kinase 25 143 254 - -
Accr11g01357 672 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 667 - -
Accr11g01357 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Accr11g01357 672 CDD STKc_IRAK 359 627 - -
Accr11g01357 672 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 29 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01357 Accr-Chr11 33890442 33893834 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01357 15 672 Receptor kinase-like Gene Family AT4G05200 43.658 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr11g01357 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01357 - - pcin:129286093 808.52