Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01354 ATGAGGTCTGTGAGGCCAGAAGGGAACTTGATATCAGTTTCACCTGCTGTAGGAAGCCTTGAAGTGAAGTCACCATCTTATTTGCCTCTTATGGAAGGGAATGCAGCCATGGCTAAAGTTTCTGTTCCTTCATACAATGTACCTACTGTTAGAAAGAAAGATTTTCAACTGAAACGTAAGCTTTCAAGTAGTCCAGAATCAAGAAAAAATCTGGATTTGGAAGATGACAAAAATCAAGGATTAGAAACTGATGCTGAAAATGCTGGCATTGCTGGGTCCCTTTTACGGTGGAAAACCTCTGGAGGATACAGTGAACCAAGTTGCAATTACACTTCATATTTATTTGGTGTTAGCAAGGATATAAGTTCTGGGCCTTTCAGGTCATTTACAGATTTTGGAAAAGATGGGACTATTGACTTGGAGAGAGAATGCTTTGTTGAGAAGGCTAGTGGTGATCAAAATCATATAAAGGATATCAGGCGTTTGATCATGCAATCAGGAGATGCTATGAGCCCAACGACATCAAGTTTTTCAAGGCATCCTTCTAACTTGAGGACCAGAGATCTGCCTCCCCGTGATGAAACTAAAGTTGGAAACAAGCATCATGCAAACATATGTGCTTTTTATGCCAAAGGATGGTGCATCAAGGGTAATTCTTGCAGTTTTGTTCACATAAAAGATCCTGAAAATAAATCAGGCCAGCAGATTGAAGGAGAATTGGTTACTCAAAATTGGAAGAGAGAAGTGCAACAGGAGGAAGGTATTGGAGATGATGTTAAGAGATCAAGGGAGCCTTATACTCAAGTTCCATTGGCTGCCACACAAGAAAGAACATCTCTGGATTCATCTGAATTTTCCTTAAACCCAATTATCCAGAGAGAAGTAGGCCCAGCCTGGCATCCAAATAAAAGTTGGTCTATCTCTGCTTTCCCTTCTGGTCTAACCCATACAGAGGGAATCACTACCACTCAAGCTGAGGGTCATTCACCTAATTTAAACATGGCTACTCACCTTCCAACTACATGTATGTCACTGTCCCCCCATATTCCTTCCCAATCAGGATGTCCATTGTCTTTTAGTGGATCCTTAGGTGAAAGTTCTACAGATTCTCAACAACTCTTGAGCACTGAAAGTTCTATAGATTCTCAACAACTCTTGAACAGTGGCATGGCATATCATGACAGCAGATCCACTTTCTCTGGTTCTAGAAGGGAAGGTTTGGCTCTAAGTATTTCATTTGGTGTTCCACCACACCCAACTGGATGTAAATTAAAATTCTCTTCGTATGATTGGGAGCCATCTATACCTTTCACACCATCTTTTTTTATTACTTCATCAAGTAGATCATCTGTAGAAGATCAAAAAGACCCTTTTCATGGTAGCGTAGAGATATCCAATTTAGGGGATGGATCCTTGAAAGCTTTCATATTACCTCAAAGGATTCAGACTTCATGGGTTCCTACAAATGGTGGGTCTGTTGAAGCTGCAAGTCAGGGATCAGATCTTCATGGTGCCAAAAGTTCTGTATCTTCTCATAATAGATGTAATAAAACTGAGTCAGAGAAGAGTTGTGTTCCTCATGAAAAAGGTTTTGTTGCAACTGAAACAGGTAGAATAGCAGCAAGATATCTAAATTTCCATGTTGGAAGGGTCGGCATGGGACTCAAGACCTTTGAAGATGTTAAAGATATAGGAAAAGAACAAACTGAGGTTGTTGCTCGACGTCAAGTTGAAGTAACAGAGTTCAAAAAACAAAGAGTAGACAGGGATCAGGAAAACAGTGAAATGGATAATAATCTTCAGAAGGATGTTGACATGCAGATAGAATCAATGGAACTGAGAAATTTCCGTTTTGCACTTGTGGATCATGTGAAAGAGGTTTTAAGTCCAGTTTGGCTTGAGGGTCACCTCAGCAAGGATGTGCATAACATGATTGTTAAGAAATCAGTTGACAAGATTATTAGCGCCTTACAGCCTCACCAAATTCCACCAAATGAGGAATCGATCAAGAAGTACCTTTCTTTTCGTGAGGTGAAAATTGCAAATCTGGTCAAGGAATATACCAGTATATATGGCGAGGTTCGATGA 2088 0.4018 MRSVRPEGNLISVSPAVGSLEVKSPSYLPLMEGNAAMAKVSVPSYNVPTVRKKDFQLKRKLSSSPESRKNLDLEDDKNQGLETDAENAGIAGSLLRWKTSGGYSEPSCNYTSYLFGVSKDISSGPFRSFTDFGKDGTIDLERECFVEKASGDQNHIKDIRRLIMQSGDAMSPTTSSFSRHPSNLRTRDLPPRDETKVGNKHHANICAFYAKGWCIKGNSCSFVHIKDPENKSGQQIEGELVTQNWKREVQQEEGIGDDVKRSREPYTQVPLAATQERTSLDSSEFSLNPIIQREVGPAWHPNKSWSISAFPSGLTHTEGITTTQAEGHSPNLNMATHLPTTCMSLSPHIPSQSGCPLSFSGSLGESSTDSQQLLSTESSIDSQQLLNSGMAYHDSRSTFSGSRREGLALSISFGVPPHPTGCKLKFSSYDWEPSIPFTPSFFITSSSRSSVEDQKDPFHGSVEISNLGDGSLKAFILPQRIQTSWVPTNGGSVEAASQGSDLHGAKSSVSSHNRCNKTESEKSCVPHEKGFVATETGRIAARYLNFHVGRVGMGLKTFEDVKDIGKEQTEVVARRQVEVTEFKKQRVDRDQENSEMDNNLQKDVDMQIESMELRNFRFALVDHVKEVLSPVWLEGHLSKDVHNMIVKKSVDKIISALQPHQIPPNEESIKKYLSFREVKIANLVKEYTSIYGEVR 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01354 695 MobiDBLite consensus disorder prediction 169 196 - -
Accr11g01354 695 MobiDBLite consensus disorder prediction 58 80 - -
Accr11g01354 695 ProSiteProfiles Zinc finger C3H1-type profile. 205 227 IPR000571 GO:0046872
Accr11g01354 695 SUPERFAMILY CCCH zinc finger 200 224 IPR036855 GO:0046872
Accr11g01354 695 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 166 691 - -
Accr11g01354 695 MobiDBLite consensus disorder prediction 492 514 - -
Accr11g01354 695 MobiDBLite consensus disorder prediction 169 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01354 Accr-Chr11 33824377 33826745 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Accr11g01354 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01354 - - pcin:129285431 462.611