Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01339 ATGGCACCAGAGTATGGATCGAATGGAGTTGTTTCTGCCAATGGAGATGTGTTTAGTTATGGGATTTTGCTTATGGAAATGTTTACGGGGAAGAAGCCAACAGATGAGATGTTTGTTCAAAGACTAACATTGAAAGATTGGGTGAGCAAATCAACACCACATTCAATCATTAACATTATAGATACCAATTTGCTGCACCGTGAAATTCAAAATACTAATAATATATTACCTCATATATCATCAATTTTTGAGTTAGCATTAAATTGTTGCATTGATTTACCAGAGGCTCGATGTACTATGACTGATGTTTTAGTATCATTGAAAAACATCAAGGCTTTGTTTATGGTTCATGCTACAAACACCACTAGTTGA 372 0.3468 MAPEYGSNGVVSANGDVFSYGILLMEMFTGKKPTDEMFVQRLTLKDWVSKSTPHSIINIIDTNLLHREIQNTNNILPHISSIFELALNCCIDLPEARCTMTDVLVSLKNIKALFMVHATNTTS 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01339 123 Gene3D Transferase(Phosphotransferase) domain 1 1 112 - -
Accr11g01339 123 ProSiteProfiles Protein kinase domain profile. 1 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01339 123 Pfam Protein tyrosine and serine/threonine kinase 1 103 IPR001245 GO:0004672|GO:0006468
Accr11g01339 123 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 2 110 - -
Accr11g01339 123 SUPERFAMILY Protein kinase-like (PK-like) 1 115 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01339 Accr-Chr11 33368211 33368682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01339 2 122 Receptor kinase-like Gene Family AT3G47570 39.669 2.86e-25 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Accr11g01339 PK_Tyr_Ser-Thr 8.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01339 - K13420 pcin:129285519 178.333