Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01320 ATGAGTTTTCTAGCTGATCATATTGCTTATGATTTGGCCATCATTGGTCTCTCCATATTTCTCTTTGTTCTTGCCATTGTTCTCTTCTTCATATGCAAGAAGAAACCAGTTCAATCTGATGAAAAGGAACAAGAAGATTATGAAGAAGATGATGAAGAAAACCAAAAAGCAATAGTGCCTCCTGTGAAGATCTGTGGGCGTGCCTACTCATTAATGGACATTGATGCTGCAACTGATGGATTCAACCAGAGGAGAATAATGGCCAAAGATCTCACAGGAACTTTATATGCTGGTGTGTTACAAAATGGTGATCTTCTTGCTGTTAAAAGGATTCATCCTTCTCTTGTTCTTAGAAATGCTGGATTGAGTGGCTTCTCATCAGTTATGAAACGCCTCTCTTCAGCTCAACATCCTAACATTGTTTCCATTATTTGGTTCTCAGAAGCACCAGGTGAAAGAATCATAGTGATGGAGTTTGTGGGAACATTGAGCTTAGAATTCTATCTTCATCAAAACCCAGATGGGAATTCACTCTTGGATTGGAACCAGAGGCTGAAAATAGCAGCAGGAGCAGCAAGAGGGCTTCACTATCTTCATCAAATTGCCTCACCAAACATAGTGCATGGCTGTGTCAAGTCCTCAAACATCCTAATAGACATAAACTTCACCGCCAGGGTTTCTGACTATGGCCTCAACTTTCTTGCTCCCCAAGAAAAAAGAGCCCTAATTGGGCATGTGGATGAAGAGTATTGGATCACTAATAACGGAGGAGGTAGTTGCAAAGAGAGTGATGTTTATGGGTTTGGAGTGCTTTTGTTGGAGCTTTTGAGTGGAAGAGGTTGTGAAGAAGGGTTGTTAGTCAAGTGGGCATTGCCATTGATTAAAGAAATGAGGTATGGTGAAGTTTTTGACCCAAGGTTGGTGATTCCTTCAGAGATTAAGCCTTTGGTTCGGTTGGCCAAAGTTGCTTCAGCTTGTGTTGGTAATTCAAGAAAATGTAGGCCTTCCATTGCTCAGGTGTCAACCATTTTGAACCATTTAGAGAGGGAAGTTTGCTTCATGACATCTCAACATTAG 1077 0.4113 MSFLADHIAYDLAIIGLSIFLFVLAIVLFFICKKKPVQSDEKEQEDYEEDDEENQKAIVPPVKICGRAYSLMDIDAATDGFNQRRIMAKDLTGTLYAGVLQNGDLLAVKRIHPSLVLRNAGLSGFSSVMKRLSSAQHPNIVSIIWFSEAPGERIIVMEFVGTLSLEFYLHQNPDGNSLLDWNQRLKIAAGAARGLHYLHQIASPNIVHGCVKSSNILIDINFTARVSDYGLNFLAPQEKRALIGHVDEEYWITNNGGGSCKESDVYGFGVLLLELLSGRGCEEGLLVKWALPLIKEMRYGEVFDPRLVIPSEIKPLVRLAKVASACVGNSRKCRPSIAQVSTILNHLEREVCFMTSQH 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01320 358 Pfam Protein tyrosine and serine/threonine kinase 106 341 IPR001245 GO:0004672|GO:0006468
Accr11g01320 358 Gene3D Phosphorylase Kinase; domain 1 40 159 - -
Accr11g01320 358 PANTHER OS01G0253100 PROTEIN 45 349 - -
Accr11g01320 358 SUPERFAMILY Protein kinase-like (PK-like) 62 344 IPR011009 -
Accr11g01320 358 ProSiteProfiles Protein kinase domain profile. 81 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01320 358 FunFam Receptor protein kinase CRINKLY4 160 351 - -
Accr11g01320 358 FunFam serine/threonine-protein kinase-like protein ACR4 31 159 - -
Accr11g01320 358 Gene3D Transferase(Phosphotransferase) domain 1 162 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01320 Accr-Chr11 32334361 32336207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01320 67 344 Receptor kinase-like Gene Family AT3G59420 39.932 4.40e-53 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr11g01320 PK_Tyr_Ser-Thr 5.5e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01320 - - vun:114187437 468.003