Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01319 ATGACATGGTGCAATGAGTCGTCAGAGGAAGAGGAGCATAATGATAATAATAACAATAGAAAGGTGATTCATCATCATCAGATTATGAGTATTAATAATAATAATATTACTGAAGCTTCTGGGCATAATGAAGTCGTCGCAACGAAACCATCTGAAATTCGAACTATTACTTGTCCTTCATGTGGCCATAACATTCAACTCCAAGATCAGGGTGGTGGGATTCATGAGCTGCCAGGGCTACCAGCAGGAGTGAAGTTTGATCCAAATGATGTAGAGATATTGGAGCATTTAGAGGCTAAGGTTCTTTCTGATGTTCGTAAGCTTCATCCTCTCATTGATGACTTCATTCCAACTCTTCAAGGTGAAAATGGAATCTGTTATACTCACCCTGAAAAGCTTCCAGGGGTAAGCAAAGATGGACAGGTCCGCCATTTCTTTCACAGGCCATCAAAAGCATACACAACAGGAACAAGGAAGAGAAGAAAGGTACACACAGACGAAGAAGGAAGCGAGACAAGGTGGCACAAAACCGGAAAAACAAGACCAGTCCTATGCAATGGTTCCGTCAAAGGTTTCAAGAAGATCCTCGTCCTCTACACCAACTATGGCAGACAGAAGAAACCTGAAAAAACCAACTGGGTAATGCATCAGTACCACCTCGGGACCAACGAGGAAGAGAAAGACGGCGAGTTAGTTGTCTCCAAGGTTTTCTTCCAGACACAACCAAGACAATGTGGTAATTTGAAGGACTCTTTTGACCAAAAAGTGATACTTAACAATGAAAATAATAATGAATCAGCAGCAACAGCAGCTTTTGTGGACTATTACACTAATCCTCCTTATATAAGTTATGACCATTTGGGTCATCATGCTAACTCAGAAAGCTCTCCTCAACTTATTCCCAACTTGGTTGTTCAAGGTGACCATGCTTCTTCCTTTATTCGTTTAACTATGGATCATTCCACCAAAGCAAGACTTGACAGGAAAATATAG 993 0.4109 MTWCNESSEEEEHNDNNNNRKVIHHHQIMSINNNNITEASGHNEVVATKPSEIRTITCPSCGHNIQLQDQGGGIHELPGLPAGVKFDPNDVEILEHLEAKVLSDVRKLHPLIDDFIPTLQGENGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVLCNGSVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGTNEEEKDGELVVSKVFFQTQPRQCGNLKDSFDQKVILNNENNNESAATAAFVDYYTNPPYISYDHLGHHANSESSPQLIPNLVVQGDHASSFIRLTMDHSTKARLDRKI 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01319 330 MobiDBLite consensus disorder prediction 153 175 - -
Accr11g01319 330 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 31 284 IPR044799 GO:0003700
Accr11g01319 330 ProSiteProfiles NAC domain profile. 80 239 IPR003441 GO:0003677|GO:0006355
Accr11g01319 330 SUPERFAMILY NAC domain 75 239 IPR036093 GO:0003677|GO:0006355
Accr11g01319 330 MobiDBLite consensus disorder prediction 159 175 - -
Accr11g01319 330 Gene3D NAC domain 90 243 IPR036093 GO:0003677|GO:0006355
Accr11g01319 330 FunFam NAC domain-containing protein 73 89 243 - -
Accr11g01319 330 Pfam No apical meristem (NAM) protein 81 220 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01319 Accr-Chr11 32299067 32302902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01319 1 321 NAC Transcription Factor Family AT1G28470 57.447 1.80e-122 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr11g01319 NAM 1.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01319 - - gmx:100795920 451.825