Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01309 ATGGGGGGTTTGATCGATCTCAACACTACGGAGGACGATGAAACACCGTCGTCTCTTTCCTCGGCAGCTTCTTCTTCGTCCTCTCACTCTGGTGTTGTAACTACTGCTTCGGCCCCTTCTTCTTCTTCTTCTTCGAACGCTGTGTGCCTGGAGCTATGGCACGCATGTGCGGGTCCACTGATCTCGTTACCCAAGAAAGGAAGCGTTGTTGTGTACTTCCCACAGGGCCACATGGAACAGCAGCTTCAGGATTTTTCGGTCGATGCCTGTAATATCAATTTCCCATTTCACGTGTTCTGTCGCGTACTTGATGTTAAGCTCCATGCTGATGAAGGGAGCGATGAAGTGTATTGCCAGGTTTTGTTGGTTCCTGAGAGTGAGCAAGTGGAACAAAAACTTCCAGAAGGAGAACTTGATGCTGATGGTGAAGAGGACGATGCTGATGCTGTGGTGAAGTCTACGACACCCCACATGTTCTGCAAGACTCTGACAGCTTCTGATACTAGCACTCATGGTGGATTTTCTGTGCCTCGTCGAGCTGCTGAAGATTGCTTCCCTCCTCTGGATTACAGCCAACAAAGACCTTCACAGGAGCTTGTGGCAAAGGATCTGCATGGCCTGGAATGGAGGTTCCGACATATTTACAGAGGTCAACCAAGGAGGCATTTGCTCACAACTGGATGGAGTGCATTTGTAAACAAGAAGAAGCTTGTGTCTGGAGATGCTGTGTTGTTTCTTAGGGGCGAGGATGGAGAACTGAGATTGGGAATTCGTAGGGCTGCTCAATTAAAAAGTGGTGGTACTTTACCAGTGCCATCGGTTCATCAGTTGAATCCCAGCACTTTCATGGATGTGATTAATGCTTTATCCACAAAATGTGCCTTTAATGTGTACTATAATCCCAGGCTTAGCTCTTCAGGATTCATAATACCCCTTCACAAATTCTTGAAGAGCCTTGATCATTCATATTTGGTTGGAATGAGGTTCAGGATGCGTGTTGAAACTGATGAAACTACAGAGAGAAGGTGCACTGGAGTAATTGTTGGAATGAGTGATGTGGATCCTATTAAGTGGCCTGGATCAAAATGGAAATGCCTGGTGGTTAGGTGGGATGACATTGAAGGTCCCAGGCATAATAGGGTTTCCCCTTGGGAGATTGAGCCATCTAGTTCTGCTCCCTCTTCCAATAATTTCATGGCAGCTAGTTTTAAGAGGAACAGGATTGGTCTGCCTCCAGAAAAGCCCGAATTTCCAGTCCTGAATAGGATTGGACGATCAGACTTTGGGGAATCATTGAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATATTGGGCGTTAATACCCCATATGTTGGTATCAATGCTCAGAGTCACCAATTATCTGAAAGTAGGTGCTATCCTGGGTCAAACTGTTCCAGAATTGTAGCAGCAGGAAATAATGTCAGGATCCCACAAGTGAGTTCTGACATGTCATGCCGTGGCATAGGCTTTAGTGAATCTTCACGATTCCAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATACAGAACCTTGTCTGCTAATGAGGTTCATAGAAATGGTTGCTTTGGAATCTTTGGTGGTAGTCAATTGCTGGGCTCCAGAAATCAATGGTCTACCCAGATGCTGGATAATTCTTCCCATATGCATCCATCTGGGCTGGTTTCATCCCCATCATCTGTTCTGATGTTCCAGCAAGCAGCCAATCCACTTTCCAACTTTGATTATGGGAATAAAAGCAGTCAAGAAATGGAGAGAAAAATGCACTACCTAGGTTCATATGCTTCTGAAGTGGAAGGTAGAAAATTAGCACAATCCCCATCTTATGAGCCTGGATCCCGTGGCCAAGTTCAGGAAGGAACAAATTCTTTTGGTACGTCAAATTTTCATAATCATCTGGTCGCAGCAAGTTCAGATGATTCTCTTTTGCCACTGACTGGTAGCCGTGAGTTGGTTTCCTCATGTAAAAGTAGCTGCAGACTCTTTGGTTTTTCATTAACCGAGGAAAATCATATTCCCCATGAAGAAGCAGGCTCCTCCACAATCACTTGTCAATTAAATTCCGGACCATCCTTTATGAGACAAGTTGGGGATGAACTTCAGCTAGGGCATTCATTCAGGAGCAAGGTGGCTGGAAGCAACCGTACCAAAGGTGTACTGCGGTATTGA 2193 0.4551 MGGLIDLNTTEDDETPSSLSSAASSSSSHSGVVTTASAPSSSSSSNAVCLELWHACAGPLISLPKKGSVVVYFPQGHMEQQLQDFSVDACNINFPFHVFCRVLDVKLHADEGSDEVYCQVLLVPESEQVEQKLPEGELDADGEEDDADAVVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGGTLPVPSVHQLNPSTFMDVINALSTKCAFNVYYNPRLSSSGFIIPLHKFLKSLDHSYLVGMRFRMRVETDETTERRCTGVIVGMSDVDPIKWPGSKWKCLVVRWDDIEGPRHNRVSPWEIEPSSSAPSSNNFMAASFKRNRIGLPPEKPEFPVLNRIGRSDFGESLRFQKVLQGQEILGVNTPYVGINAQSHQLSESRCYPGSNCSRIVAAGNNVRIPQVSSDMSCRGIGFSESSRFQVLQGQEILPSQPYRTLSANEVHRNGCFGIFGGSQLLGSRNQWSTQMLDNSSHMHPSGLVSSPSSVLMFQQAANPLSNFDYGNKSSQEMERKMHYLGSYASEVEGRKLAQSPSYEPGSRGQVQEGTNSFGTSNFHNHLVAASSDDSLLPLTGSRELVSSCKSSCRLFGFSLTEENHIPHEEAGSSTITCQLNSGPSFMRQVGDELQLGHSFRSKVAGSNRTKGVLRY 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01309 730 FunFam Auxin response factor 322 393 - -
Accr11g01309 730 MobiDBLite consensus disorder prediction 1 42 - -
Accr11g01309 730 SMART B3_2 159 261 IPR003340 GO:0003677
Accr11g01309 730 Gene3D - 323 395 - -
Accr11g01309 730 MobiDBLite consensus disorder prediction 617 632 - -
Accr11g01309 730 SUPERFAMILY DNA-binding pseudobarrel domain 152 265 IPR015300 -
Accr11g01309 730 Pfam Auxin response factor 286 366 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Accr11g01309 730 CDD B3_DNA 157 259 IPR003340 GO:0003677
Accr11g01309 730 Gene3D - 157 261 IPR015300 -
Accr11g01309 730 ProSiteProfiles B3 DNA-binding domain profile. 159 261 IPR003340 GO:0003677
Accr11g01309 730 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 46 685 IPR044835 GO:0003677|GO:0006355|GO:0009725
Accr11g01309 730 Pfam B3 DNA binding domain 159 260 IPR003340 GO:0003677
Accr11g01309 730 FunFam Auxin response factor 157 261 - -
Accr11g01309 730 MobiDBLite consensus disorder prediction 610 632 - -
Accr11g01309 730 MobiDBLite consensus disorder prediction 10 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01309 Accr-Chr11 31998196 32006613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01309 44 710 B3 DNA Binding Superfamily AT5G60450 41.532 1.19e-146 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Accr11g01309 B3 2.5e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01309 K14486 - gmx:100789906 966.837