Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01290 ATGAAAAAGGTTTCGAAGACCAGCTGCAAGTCAGCATCACATAGGCTCTTTAAAGACAAGGCGAAGAATCGGGTTGATGATCTGCAATTGATGTTCATGGATCTGCAGTTTGCCAGGAAGGAAAGTCGGACAGTTGATGCTGCTGTTCTTGAGGAGCAGGTCCATCAGATGCTTCGTGAATGGAAGGCTGAGCTTAATGAGCCCTCTCCTGCTTCTTCTTTACAGCAAGGTGGCAGTCTTGGATCATTCTCCACCGATATCTGTCGGTTGTTGCAGCTCTGTGAGGAAGAAGATGATGCCACTAGTCCATTAGCTGCTCCAAAGCCTGAGCCTAATGATCAGAGTTTGCAAGCTGGGGCTAATATGATATTTCAAGAGGGTCAACAGCAACATGATTTCTCATTGGTTGATGAGACCAAATTCACCTCTGGAGTTCGGAATGTTGCAGCTAATGATGTGGATGGAGCTGCTCTAGAATATCATCAGTTTGACTTCCATCAAGACCTCAATCACAGTTTCTATACTGGTTTTTATGGGTCAGCATTTTGTGAGGAGGATGCCATTCCCCATGTATCTAACTATCTCCCTAGCATCTGCCCTCCTCCTTCTGCCTTCCTAGGCCCAAAATGTGCGCTTTGGGACTGTCCAAGGCCTGCTCAAGGGTTGGACTGGTGTCAAGACTATTGCAGTAGCTTTCATGCTACTCTAGCATTGAATGAAGGGCCACCAGGAATGGCCCCGGTTCTACGACCAGGGGGCATTGGTTTGAAGGACAATTTACTCTTTGCTGCTCTTAGTGCAAAGGCACAGGGAAAAGATGTTGGCATCCCTGACTGTGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCACCTGAGTTATTCGATCTCGCTGTTCTGGAAGGTGAGACTATCAGGGAGTGGCTTTTCTTTGATAAGCCTAGGAGAGCGTTTGAGAGTGGAAACAGAAAGCAGAGGTCACTGCCGGATTACAGTGGACGTGGTTGGCATGAATCTAGGAAGCAAGTGATGAATGAATATGGAGGGCTGAAACGATCCTATTATATGGACCCACAACCACTGAACCATTTTGAGTGGCATCTTTATGAGTATGAGATTAGCAAGTGTGATGTGTGTGCCTTGTATCGGTTGGAGTTAAAGCTTGTTGATGGGAAGAAGAACTCCAAGGCAAAAGTAACTAATGATTCAGTTGCTGATTTGCAGAAGCAGATGAGGAGGCTCTCTGCTGAGTTCCCTCCTGATAACAAACAGCCTGTGAAAGTCAGGGCTAAACTCAATGCCAAGATTGGCATAGGTGGTGTCTATCCAGCGTCTAACAGAGTGACTCCGGGAGGAAACGGAACATATGAGTATGGTTTGGCTGCACCTTATGATTATCTTGTTGACAATGCCGGTGACTATTATGTGACGTGA 1434 0.4658 MKKVSKTSCKSASHRLFKDKAKNRVDDLQLMFMDLQFARKESRTVDAAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDATSPLAAPKPEPNDQSLQAGANMIFQEGQQQHDFSLVDETKFTSGVRNVAANDVDGAALEYHQFDFHQDLNHSFYTGFYGSAFCEEDAIPHVSNYLPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHATLALNEGPPGMAPVLRPGGIGLKDNLLFAALSAKAQGKDVGIPDCEGAATAKSPWNAPELFDLAVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEYGGLKRSYYMDPQPLNHFEWHLYEYEISKCDVCALYRLELKLVDGKKNSKAKVTNDSVADLQKQMRRLSAEFPPDNKQPVKVRAKLNAKIGIGGVYPASNRVTPGGNGTYEYGLAAPYDYLVDNAGDYYVT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01290 477 Coils Coil 397 417 - -
Accr11g01290 477 PANTHER TRANSCRIPTION FACTOR VOZ1 1 472 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01290 Accr-Chr11 31342089 31346391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01290 3 476 VOZ-9 Transcription Factor Family AT1G28520 69.106 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Accr11g01290 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01290 - - gmx:100798565 870.922