Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01282 ATGATTCTTCTTCTGCTGCTTCTGTTCCAATTTCTGTTCATAGCAGCACATGACTCCAACCAAGACTTTACAGCTTTATCATCTCTCACTGAGTCTTGGGGAAACAAGCCACCAAATTGGGTGGGTACAGATCCTTGTGGTGGTGGTTGGGATGGCATTGGATGTACCAAATCAAGAGTGACCACAATACAATTGCCAAGCATGAACTTAACAGGCAGGTTGACGGATGATATTGGGGGATTAACTGAATTAGGAACTCTGGACCTCTCTTACAACAAAGGCATGAGTGGAAGAATTCCACCTGAAATTGGGAATTTGAGAAAATTACGAACCCTGTCATTGGTTGGTTGTGGTTTCTTTGGTCCTATTCCTGATTCATTAGGAGCTCTTAATCAGCTGACCTTTTTAGCTCTTAATCTTAATCGGTTAAGTGGGCCTATTCCACGTACGTTTGGAAATCTATCCAACGTTGATTGGCTAGATATTTCAGACAACCAAATTGAAGGACCTATCCCTATCTCTGATGAACAAGGACCTGGTCTTGACATGCTTCTCAAAACACAGCACTTTCACTTTGGAAACAACCACCTCTCTGGGCAAGTTCAACCGAAGCTTTTCAACTCAAATATGATACTGAAACACTTGCTTCTTGACAACAATAACCTAAGTGGCAAGATTCCAGACACTATTGGCTTAGTGAAGACATTGGAAGTGATACGCTATAACCACAATTATATGAGTGGAGAAGTACCTTCAAGTATTGGAAATCTCACAAACCTCACTGATCTGTATTTAGGCAACAATAAGCTAAATGGCTCTATGCCTGATCTTACTCGATTAAATTCACTAGCCACTGTGGATTTGAGCAACAACTCTTTTAATTCTTCCAGTATCCCTTCTTGGGCTTCAAGTTTGCCATATCTAACTACATTAACATTGGAAAACACTGGACTGCAAGGGAAAATACCTACCTCCTTATTTAGCCAGCCTAATATAGAGACTGTGATAATGAGGAATAATCAGCTCAATGGTACCTTGGATGTTAGCAACTACAAACCCAATTTGGCTCTTGTAGATTTGGGGGCTAATAAGATAACTGACTTTGCTCAGAAAGGTCAAAAAATCACTTTTGTCATACTAGTTGGCAACCCCATTTGTCTAGAAACAGGAGCTGATTCAAAGAGTTATTGCACCAACTCACAAAATAGTATCACATATTCAACAGGACCAAATAACTGTATACCTCCTTCTTGTAGATCAAACAAGGTTTCCCACAAATGTGTATTTCCCTATACAGGAATTCTGACTTCTAAAGCTCCCGAATTCTCAAACTTCGGCAACGAAAGTTATTTTTCGGAACTTGAAAATAGCTTGTTGGCCACTTTCCAGAACCTTCACCTGCCAGTGGATTTAGTTTTTCTCAGCAACCCATTCTGGGACACTTTTTCTGGTTATCTTAGTTTGGACCTAAAAGTCTTCCCATCTCAAATTGACTCTTTCAACAGAACCGGAGTTGTAAGCATTTCGTCTGTGCTCTCCAACCAGATCTATAAAGCTCCAGGATTTTTCACCCCATACATTTTTAATGGTAGCAGTAGCTATGATTTCTCCGCAGAGTGTTCTTCAACTAAAATACATACGGGGATTATAGCCGGTGCAGTAGCTACTGGTGTTGTCATTTTGGTACTGTCCATCACTGTAATATTTTTAATCCGCCAGAAGAAAAGAACGAAGGCATTTAATCCTTTTGCAAACTGGGAACAGAACAATAATAGTGGCAATGCTCCTCAGCTAAAAGGAGCACGTTGGTTTTCTTTTGAAGAGCTCAAGAAATACACCAACAACTTTTCTGACGCCAATGCTATTGGAGCCGGGGGCTATGGAAAGGTTTACCAAGCTGTTCTTTCCTCTGGGGAACTGGTCGCCGTTAAGCGTGCTTCTCAAGAATCTATGCAGGGTGCTTTTGAGTTCAAAACTGAGATTGAGCTTCTATCAAGGGTTCATCACAAGAATCTTGTTGGTCTTGTTGGATTCTGTTATGATAAAGGTGAACAAATGCTGGTTTATGAGTATGTTCCAAATGGCACTATAATGGACAGCCTTTCAGGAAAATCTGGAATTAGAATGAACTGGATAAGGAGGCTAAAAGTAGCTGTGGGAGCAGCCAGAGGGCTAGCCTATCTTCATGAACTAGCCGATCCACCAATCATACACAGGGACATAAAATCAAGTAATATCCTGCTTGATGACCACCTAAATGCAAAAGTTGCGGATTTTGGTCTCTCCAAACTTAAGGATAGTGACAGAGGCCATATCACAACTCAAGTCAAAGGCACAATGGGGTATATGGATCCTGAATACTACATGACTCAGCAGTTAACAGTAAAGAGCGATGTGTACAGCTTTGGCATTACAATGCTTGAGTTGGTAACAGCAAGGAAGCCAATAGAGCAAGGAAAGTTCATTATAAGAGAGGTTCTAAGAATAATGGATAGATCAAAGGAGTTGTATAATCTTCATGCCCTTATAGATCCAATGATAAAGCAAGAAGGAAACCCAAAAGGCTTAGAGAAATTTGTAGACTTAGCATTGAAGTGTGTCAATGATCATGCGGAAGAGAGGCCAACAATGGCTGATGTTGTTAAAGAGATTGAGAATATACTGCAACTTGCCGGTTTCAACCCCAATGCTGAATCAACATCAACATCAGAAACTTATGAAAATGCCAGTGGGGGGAAGATTTACCATCCTTATGTCGATGAAGATTTCGCCTACACCAGCGTTTTTCCACTGGTAAGGGTGGAACCTCAGTAA 2814 0.4076 MILLLLLLFQFLFIAAHDSNQDFTALSSLTESWGNKPPNWVGTDPCGGGWDGIGCTKSRVTTIQLPSMNLTGRLTDDIGGLTELGTLDLSYNKGMSGRIPPEIGNLRKLRTLSLVGCGFFGPIPDSLGALNQLTFLALNLNRLSGPIPRTFGNLSNVDWLDISDNQIEGPIPISDEQGPGLDMLLKTQHFHFGNNHLSGQVQPKLFNSNMILKHLLLDNNNLSGKIPDTIGLVKTLEVIRYNHNYMSGEVPSSIGNLTNLTDLYLGNNKLNGSMPDLTRLNSLATVDLSNNSFNSSSIPSWASSLPYLTTLTLENTGLQGKIPTSLFSQPNIETVIMRNNQLNGTLDVSNYKPNLALVDLGANKITDFAQKGQKITFVILVGNPICLETGADSKSYCTNSQNSITYSTGPNNCIPPSCRSNKVSHKCVFPYTGILTSKAPEFSNFGNESYFSELENSLLATFQNLHLPVDLVFLSNPFWDTFSGYLSLDLKVFPSQIDSFNRTGVVSISSVLSNQIYKAPGFFTPYIFNGSSSYDFSAECSSTKIHTGIIAGAVATGVVILVLSITVIFLIRQKKRTKAFNPFANWEQNNNSGNAPQLKGARWFSFEELKKYTNNFSDANAIGAGGYGKVYQAVLSSGELVAVKRASQESMQGAFEFKTEIELLSRVHHKNLVGLVGFCYDKGEQMLVYEYVPNGTIMDSLSGKSGIRMNWIRRLKVAVGAARGLAYLHELADPPIIHRDIKSSNILLDDHLNAKVADFGLSKLKDSDRGHITTQVKGTMGYMDPEYYMTQQLTVKSDVYSFGITMLELVTARKPIEQGKFIIREVLRIMDRSKELYNLHALIDPMIKQEGNPKGLEKFVDLALKCVNDHAEERPTMADVVKEIENILQLAGFNPNAESTSTSETYENASGGKIYHPYVDEDFAYTSVFPLVRVEPQ 937
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01282 937 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 692 901 - -
Accr11g01282 937 Pfam Protein kinase domain 618 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01282 937 ProSiteProfiles Protein kinase domain profile. 616 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01282 937 FunFam Leucine-rich repeat protein kinase family protein 177 276 - -
Accr11g01282 937 SMART serkin_6 616 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01282 937 Gene3D Transferase(Phosphotransferase) domain 1 692 908 - -
Accr11g01282 937 ProSitePatterns Protein kinases ATP-binding region signature. 622 644 IPR017441 GO:0005524
Accr11g01282 937 Gene3D Phosphorylase Kinase; domain 1 586 691 - -
Accr11g01282 937 Gene3D Ribonuclease Inhibitor 176 403 IPR032675 -
Accr11g01282 937 SUPERFAMILY Protein kinase-like (PK-like) 599 891 IPR011009 -
Accr11g01282 937 ProSitePatterns Serine/Threonine protein kinases active-site signature. 736 748 IPR008271 GO:0004672|GO:0006468
Accr11g01282 937 Gene3D Ribonuclease Inhibitor 17 175 IPR032675 -
Accr11g01282 937 CDD STKc_IRAK 622 887 - -
Accr11g01282 937 FunFam Leucine-rich repeat family protein 21 176 - -
Accr11g01282 937 PANTHER RECEPTOR-LIKE PROTEIN 55 27 887 - -
Accr11g01282 937 FunFam Leucine-rich repeat protein kinase family protein 583 691 - -
Accr11g01282 937 ProSiteProfiles Leucine-rich repeat profile. 259 281 IPR001611 GO:0005515
Accr11g01282 937 SUPERFAMILY L domain-like 32 385 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Accr11g01282 Accr-Chr11 31062063 31071901 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01282 2 937 Receptor kinase-like Gene Family AT5G49760 52.096 0.0 920
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Accr11g01282 Pkinase 9.4e-49 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01282 - - gmx:100786172 1137.87