Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr11g01280 | ATGGACCAACGAAACACAGTGGTTCTTCTTCCTCTGCTGCTTCTGTTCCATGTTCTGTTCATAGCAGCACAGAACTCCAACCAAGACTTTACAGCTTTATCATCTCTAACTGAGTTTTGGGAAAACAAGCCACCAAGCTGGGTGGGTACAGATCCTTGTGGTGGTGGTTGGGATGGCATTGGATGTACCAAATCAAGAGTGACCGCAATACAATTGCTAAGCATGAACTTAAAAGGCAGCTTGACAGGGGATATTGGGAGATTAACTGAATTAAGAACTCTGGACCTCTCTTACAACAAAGGCTTGAGTGGAAGAATTCCAGCTGAAATTGGGAATTTGAGAAATTTACAAACCCTGTCATTGGTTGGTTGTGATTTCTTTGGTCCTATTCCCGATTCATTAGGAGCTCTTAATCAGCTGACCTTTTTGGCTCTTAATCTTAATCGGTTGAGTGGGCCTATTCCACGTACGTTTGGAAATCTATCCAATGTTGATTGGCTAGATATTGCAGACAACCAGATTGAAGGACCTATCCCTATCTCTGATGAACAAGGACCTGGTCTTGACATGCTACTCAAAACAGAGCACTTTCATTTTGGAAACAACCGCCTCTCAGGACAAGTTCAACCTAAGCTTTTCAGCTCAAATATGATACTGAAACACCTACTTCTTGACAACAATAACCTAAGTGGCAACATTCCAGACACTATTGGATTAGTAAAGACATTGACAGTGATACGCTATAACCACAATCATATGACTGGAGAAGTACCTTCAAGTATCAGAAATCTCACAAAACTCACTGAACTGTATTTAGGCTACAATAAGCTAAATGGCTCTATGCCTGATCTAACTGGATTAAATTCACTTGCTACTGTGGATTTGAGCAACAACTCTTTTAATTCTCCCAGTATCCCTTCTTGGGCTTCAAGTTTGCCATATCTAACTACATTAACATTGGAAAACACTGGACTGCAAGGGAAAATACCTGCCTCCTTATTTAGCCAGCCTAATATAGAGACTATAATAATGAGGAATAATCAGCTCAATGGTACCCTGGATGTTGGCAACTACACACCCAATTTGGGTCTTGTAGATTTGGGGACTAATAAGATAACTGACTTTGCTCAGGAAAGTCAACAAATCACTTTTAATGTCACACTAGTTGGCAACCCCATTTGTCTAGAAACAGGAGCTGATTCACAACGTTACTGCACAAACTCACAAAATAGTATCACATATTCAACTGTACCAAATAACTGTATACCTCCTTCTTGTAGTTCAAACATGGTTTCCAGCCCAAACTGCAAATGTGCATTACCCTATACAGGAGCTCTGACTTCTAGAGCTCTTGGTTTCTCAAACTTTCGAAACATAAGTTATTTTAAGGATCTTGAGCATGGCTTGTTGGCCACTTTCCAGTCCCATAACCTGCCAGTGGATTCAGTTTCTCTCAGCAACCCATTATGGAACTCTTCTTCTGGTTATTTTAGATTGAACCTCAATGTCTTCCCATCTCAAAGTCAGCGTTTCAACAGAACCGGAGTTGTAAGCATTTCGTTTGTGCTCTCTAACCAGATCTATAAAGCTCCAGCATTTTTCACCCCATACTATTTTTCTAGTAGCAGTAGCTATGATTTCTCCGCAGAGTCTCCTTCAAGTAAAATACATACGGGGATTATAGCCGGTGCCGTAGCTGCTGGTGTTGTCATTTTGGTACTGTCCATCATTGTAATATTTGTAATCCGCCAGAAGAAAAGAACAAAAGCATTTGATCCTTTTGAAAGCTGGGAACAGAACAATAATAGTGGCAATGCTCCTCAGCTAAAAGGAGCACGTTGGTTTTCTTTTGAAGAGCTCAAGAAATACACCAACAACTTTGCCGACGTCAATGCTATTGGAGCCGGGGGCTATGGAAAGGTTTACCAAGCTGTTCTTCCCTCTGGGGAACTGGTCGCCATCAAGCGTGCTTCTCAAGAATCTATACAGGGTGCTGTTGAGTTTAAAACTGAGATTGAGCTTCTATCAAGGGTTCATCACAAGAATCTTGTTGGTCTTGTGGGATTCTGCTATGATAAAAATGAACAAATGCTGGTATATGAGTATGTTCCTAATGGCAATATAATGGACAGTCTTTCAGGAAAATCTGGAATTAGGATGAACTGGATAAGGAGGCTAAAAGCAGCTGTGGGCGCAGCTAGAGGGCTAGCCTATCTTCATGAACTAGCTGACCCACCAATCATACACAGGGACATAAAATCAAGTAATATCCTGCTCGATGACCACCTAAATGCAAAAGTTGCTGATTTTGGTCTCTCCAAACTTAAGGATAGTGACAGGGGCCATATCACAACCCAAGTCAAAGGCACAATGGGGTATATGGATCCTGAATACTACATGACTCAGCAGTTAACAGAAAAGAGCGATGTATATAGCTTTGGAATTACAATGCTTGAGCTGGTGACAGCAAGGAAGCCAATAGAGCAAGGAAAGTTCATTGTAAGAGAGGTTCTAAGAATAATGGATAGATCAAAAGAGTTGTACAATCTTCATTCCCTTATAGATCCAATGATAATGCAAGAAGGAAACCCAAAAGGCTTAGAGAAATTTGTAGACTTAGCATTGAAGTGTGTCAAGGATCATTCGGAAGAGAGGCCAAAAATGGCTGATGTTGTGAAAGAGATTGAGAATATACTGCAACTTGCCGGTTTCAACCCCAATGCTGAATCAACATCAACATCAGAAACTTATGAAAATGCCAGCGGTGGGAAGATTTACCATCCTTACGTTGATGAAGATTTCGCCTACTCGAGCGTTTTTCCACCGGTAAAGGTGGAACCTCAGTAA | 2847 | 0.411 | MDQRNTVVLLPLLLLFHVLFIAAQNSNQDFTALSSLTEFWENKPPSWVGTDPCGGGWDGIGCTKSRVTAIQLLSMNLKGSLTGDIGRLTELRTLDLSYNKGLSGRIPAEIGNLRNLQTLSLVGCDFFGPIPDSLGALNQLTFLALNLNRLSGPIPRTFGNLSNVDWLDIADNQIEGPIPISDEQGPGLDMLLKTEHFHFGNNRLSGQVQPKLFSSNMILKHLLLDNNNLSGNIPDTIGLVKTLTVIRYNHNHMTGEVPSSIRNLTKLTELYLGYNKLNGSMPDLTGLNSLATVDLSNNSFNSPSIPSWASSLPYLTTLTLENTGLQGKIPASLFSQPNIETIIMRNNQLNGTLDVGNYTPNLGLVDLGTNKITDFAQESQQITFNVTLVGNPICLETGADSQRYCTNSQNSITYSTVPNNCIPPSCSSNMVSSPNCKCALPYTGALTSRALGFSNFRNISYFKDLEHGLLATFQSHNLPVDSVSLSNPLWNSSSGYFRLNLNVFPSQSQRFNRTGVVSISFVLSNQIYKAPAFFTPYYFSSSSSYDFSAESPSSKIHTGIIAGAVAAGVVILVLSIIVIFVIRQKKRTKAFDPFESWEQNNNSGNAPQLKGARWFSFEELKKYTNNFADVNAIGAGGYGKVYQAVLPSGELVAIKRASQESIQGAVEFKTEIELLSRVHHKNLVGLVGFCYDKNEQMLVYEYVPNGNIMDSLSGKSGIRMNWIRRLKAAVGAARGLAYLHELADPPIIHRDIKSSNILLDDHLNAKVADFGLSKLKDSDRGHITTQVKGTMGYMDPEYYMTQQLTEKSDVYSFGITMLELVTARKPIEQGKFIVREVLRIMDRSKELYNLHSLIDPMIMQEGNPKGLEKFVDLALKCVKDHSEERPKMADVVKEIENILQLAGFNPNAESTSTSETYENASGGKIYHPYVDEDFAYSSVFPPVKVEPQ | 948 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr11g01280 | 948 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 747 | 759 | IPR008271 | GO:0004672|GO:0006468 | |
Accr11g01280 | 948 | Gene3D | Ribonuclease Inhibitor | 186 | 426 | IPR032675 | - | |
Accr11g01280 | 948 | Pfam | Protein kinase domain | 629 | 893 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr11g01280 | 948 | SUPERFAMILY | Protein kinase-like (PK-like) | 610 | 902 | IPR011009 | - | |
Accr11g01280 | 948 | SUPERFAMILY | L domain-like | 66 | 383 | - | - | |
Accr11g01280 | 948 | Gene3D | Transferase(Phosphotransferase) domain 1 | 703 | 919 | - | - | |
Accr11g01280 | 948 | CDD | STKc_IRAK | 633 | 898 | - | - | |
Accr11g01280 | 948 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 34 | 898 | - | - | |
Accr11g01280 | 948 | ProSitePatterns | Protein kinases ATP-binding region signature. | 633 | 655 | IPR017441 | GO:0005524 | |
Accr11g01280 | 948 | FunFam | Leucine-rich repeat protein kinase family protein | 594 | 702 | - | - | |
Accr11g01280 | 948 | ProSiteProfiles | Protein kinase domain profile. | 627 | 899 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr11g01280 | 948 | Gene3D | Phosphorylase Kinase; domain 1 | 597 | 702 | - | - | |
Accr11g01280 | 948 | FunFam | Leucine-rich repeat protein kinase family protein | 184 | 283 | - | - | |
Accr11g01280 | 948 | FunFam | LRR receptor-like serine/threonine-protein kinase HSL2 | 703 | 912 | - | - | |
Accr11g01280 | 948 | SMART | serkin_6 | 627 | 899 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr11g01280 | 948 | Gene3D | Ribonuclease Inhibitor | 24 | 184 | IPR032675 | - | |
Accr11g01280 | 948 | FunFam | Leucine-rich repeat family protein | 28 | 183 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr11g01280 | Accr-Chr11 | 30998081 | 31006074 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr11g01280 | 1 | 948 | Receptor kinase-like Gene Family | AT5G49760 | 52.192 | 0.0 | 932 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VIII-1 | Accr11g01280 | Pkinase | 3.9e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr11g01280 | - | - | mtr:11440804 | 1146.34 |