Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01280 ATGGACCAACGAAACACAGTGGTTCTTCTTCCTCTGCTGCTTCTGTTCCATGTTCTGTTCATAGCAGCACAGAACTCCAACCAAGACTTTACAGCTTTATCATCTCTAACTGAGTTTTGGGAAAACAAGCCACCAAGCTGGGTGGGTACAGATCCTTGTGGTGGTGGTTGGGATGGCATTGGATGTACCAAATCAAGAGTGACCGCAATACAATTGCTAAGCATGAACTTAAAAGGCAGCTTGACAGGGGATATTGGGAGATTAACTGAATTAAGAACTCTGGACCTCTCTTACAACAAAGGCTTGAGTGGAAGAATTCCAGCTGAAATTGGGAATTTGAGAAATTTACAAACCCTGTCATTGGTTGGTTGTGATTTCTTTGGTCCTATTCCCGATTCATTAGGAGCTCTTAATCAGCTGACCTTTTTGGCTCTTAATCTTAATCGGTTGAGTGGGCCTATTCCACGTACGTTTGGAAATCTATCCAATGTTGATTGGCTAGATATTGCAGACAACCAGATTGAAGGACCTATCCCTATCTCTGATGAACAAGGACCTGGTCTTGACATGCTACTCAAAACAGAGCACTTTCATTTTGGAAACAACCGCCTCTCAGGACAAGTTCAACCTAAGCTTTTCAGCTCAAATATGATACTGAAACACCTACTTCTTGACAACAATAACCTAAGTGGCAACATTCCAGACACTATTGGATTAGTAAAGACATTGACAGTGATACGCTATAACCACAATCATATGACTGGAGAAGTACCTTCAAGTATCAGAAATCTCACAAAACTCACTGAACTGTATTTAGGCTACAATAAGCTAAATGGCTCTATGCCTGATCTAACTGGATTAAATTCACTTGCTACTGTGGATTTGAGCAACAACTCTTTTAATTCTCCCAGTATCCCTTCTTGGGCTTCAAGTTTGCCATATCTAACTACATTAACATTGGAAAACACTGGACTGCAAGGGAAAATACCTGCCTCCTTATTTAGCCAGCCTAATATAGAGACTATAATAATGAGGAATAATCAGCTCAATGGTACCCTGGATGTTGGCAACTACACACCCAATTTGGGTCTTGTAGATTTGGGGACTAATAAGATAACTGACTTTGCTCAGGAAAGTCAACAAATCACTTTTAATGTCACACTAGTTGGCAACCCCATTTGTCTAGAAACAGGAGCTGATTCACAACGTTACTGCACAAACTCACAAAATAGTATCACATATTCAACTGTACCAAATAACTGTATACCTCCTTCTTGTAGTTCAAACATGGTTTCCAGCCCAAACTGCAAATGTGCATTACCCTATACAGGAGCTCTGACTTCTAGAGCTCTTGGTTTCTCAAACTTTCGAAACATAAGTTATTTTAAGGATCTTGAGCATGGCTTGTTGGCCACTTTCCAGTCCCATAACCTGCCAGTGGATTCAGTTTCTCTCAGCAACCCATTATGGAACTCTTCTTCTGGTTATTTTAGATTGAACCTCAATGTCTTCCCATCTCAAAGTCAGCGTTTCAACAGAACCGGAGTTGTAAGCATTTCGTTTGTGCTCTCTAACCAGATCTATAAAGCTCCAGCATTTTTCACCCCATACTATTTTTCTAGTAGCAGTAGCTATGATTTCTCCGCAGAGTCTCCTTCAAGTAAAATACATACGGGGATTATAGCCGGTGCCGTAGCTGCTGGTGTTGTCATTTTGGTACTGTCCATCATTGTAATATTTGTAATCCGCCAGAAGAAAAGAACAAAAGCATTTGATCCTTTTGAAAGCTGGGAACAGAACAATAATAGTGGCAATGCTCCTCAGCTAAAAGGAGCACGTTGGTTTTCTTTTGAAGAGCTCAAGAAATACACCAACAACTTTGCCGACGTCAATGCTATTGGAGCCGGGGGCTATGGAAAGGTTTACCAAGCTGTTCTTCCCTCTGGGGAACTGGTCGCCATCAAGCGTGCTTCTCAAGAATCTATACAGGGTGCTGTTGAGTTTAAAACTGAGATTGAGCTTCTATCAAGGGTTCATCACAAGAATCTTGTTGGTCTTGTGGGATTCTGCTATGATAAAAATGAACAAATGCTGGTATATGAGTATGTTCCTAATGGCAATATAATGGACAGTCTTTCAGGAAAATCTGGAATTAGGATGAACTGGATAAGGAGGCTAAAAGCAGCTGTGGGCGCAGCTAGAGGGCTAGCCTATCTTCATGAACTAGCTGACCCACCAATCATACACAGGGACATAAAATCAAGTAATATCCTGCTCGATGACCACCTAAATGCAAAAGTTGCTGATTTTGGTCTCTCCAAACTTAAGGATAGTGACAGGGGCCATATCACAACCCAAGTCAAAGGCACAATGGGGTATATGGATCCTGAATACTACATGACTCAGCAGTTAACAGAAAAGAGCGATGTATATAGCTTTGGAATTACAATGCTTGAGCTGGTGACAGCAAGGAAGCCAATAGAGCAAGGAAAGTTCATTGTAAGAGAGGTTCTAAGAATAATGGATAGATCAAAAGAGTTGTACAATCTTCATTCCCTTATAGATCCAATGATAATGCAAGAAGGAAACCCAAAAGGCTTAGAGAAATTTGTAGACTTAGCATTGAAGTGTGTCAAGGATCATTCGGAAGAGAGGCCAAAAATGGCTGATGTTGTGAAAGAGATTGAGAATATACTGCAACTTGCCGGTTTCAACCCCAATGCTGAATCAACATCAACATCAGAAACTTATGAAAATGCCAGCGGTGGGAAGATTTACCATCCTTACGTTGATGAAGATTTCGCCTACTCGAGCGTTTTTCCACCGGTAAAGGTGGAACCTCAGTAA 2847 0.411 MDQRNTVVLLPLLLLFHVLFIAAQNSNQDFTALSSLTEFWENKPPSWVGTDPCGGGWDGIGCTKSRVTAIQLLSMNLKGSLTGDIGRLTELRTLDLSYNKGLSGRIPAEIGNLRNLQTLSLVGCDFFGPIPDSLGALNQLTFLALNLNRLSGPIPRTFGNLSNVDWLDIADNQIEGPIPISDEQGPGLDMLLKTEHFHFGNNRLSGQVQPKLFSSNMILKHLLLDNNNLSGNIPDTIGLVKTLTVIRYNHNHMTGEVPSSIRNLTKLTELYLGYNKLNGSMPDLTGLNSLATVDLSNNSFNSPSIPSWASSLPYLTTLTLENTGLQGKIPASLFSQPNIETIIMRNNQLNGTLDVGNYTPNLGLVDLGTNKITDFAQESQQITFNVTLVGNPICLETGADSQRYCTNSQNSITYSTVPNNCIPPSCSSNMVSSPNCKCALPYTGALTSRALGFSNFRNISYFKDLEHGLLATFQSHNLPVDSVSLSNPLWNSSSGYFRLNLNVFPSQSQRFNRTGVVSISFVLSNQIYKAPAFFTPYYFSSSSSYDFSAESPSSKIHTGIIAGAVAAGVVILVLSIIVIFVIRQKKRTKAFDPFESWEQNNNSGNAPQLKGARWFSFEELKKYTNNFADVNAIGAGGYGKVYQAVLPSGELVAIKRASQESIQGAVEFKTEIELLSRVHHKNLVGLVGFCYDKNEQMLVYEYVPNGNIMDSLSGKSGIRMNWIRRLKAAVGAARGLAYLHELADPPIIHRDIKSSNILLDDHLNAKVADFGLSKLKDSDRGHITTQVKGTMGYMDPEYYMTQQLTEKSDVYSFGITMLELVTARKPIEQGKFIVREVLRIMDRSKELYNLHSLIDPMIMQEGNPKGLEKFVDLALKCVKDHSEERPKMADVVKEIENILQLAGFNPNAESTSTSETYENASGGKIYHPYVDEDFAYSSVFPPVKVEPQ 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01280 948 ProSitePatterns Serine/Threonine protein kinases active-site signature. 747 759 IPR008271 GO:0004672|GO:0006468
Accr11g01280 948 Gene3D Ribonuclease Inhibitor 186 426 IPR032675 -
Accr11g01280 948 Pfam Protein kinase domain 629 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01280 948 SUPERFAMILY Protein kinase-like (PK-like) 610 902 IPR011009 -
Accr11g01280 948 SUPERFAMILY L domain-like 66 383 - -
Accr11g01280 948 Gene3D Transferase(Phosphotransferase) domain 1 703 919 - -
Accr11g01280 948 CDD STKc_IRAK 633 898 - -
Accr11g01280 948 PANTHER RECEPTOR-LIKE PROTEIN 55 34 898 - -
Accr11g01280 948 ProSitePatterns Protein kinases ATP-binding region signature. 633 655 IPR017441 GO:0005524
Accr11g01280 948 FunFam Leucine-rich repeat protein kinase family protein 594 702 - -
Accr11g01280 948 ProSiteProfiles Protein kinase domain profile. 627 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01280 948 Gene3D Phosphorylase Kinase; domain 1 597 702 - -
Accr11g01280 948 FunFam Leucine-rich repeat protein kinase family protein 184 283 - -
Accr11g01280 948 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 703 912 - -
Accr11g01280 948 SMART serkin_6 627 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01280 948 Gene3D Ribonuclease Inhibitor 24 184 IPR032675 -
Accr11g01280 948 FunFam Leucine-rich repeat family protein 28 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01280 Accr-Chr11 30998081 31006074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01280 1 948 Receptor kinase-like Gene Family AT5G49760 52.192 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Accr11g01280 Pkinase 3.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01280 - - mtr:11440804 1146.34