Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01276 ATGGCTTCTTCAAACAGACACTGGCCTAGCATGTTCAAGTCCAAGCCCTGCAACCCCCACCACCACCATCCATGGCATCACGACATGAACTCCTCCTCCCTCATCTCCTCCGCCACCACCACCTGCCACCGTACCCCTCACTCTTCTTCTTCCTCTTCCTCCTCTGGTTGTGAGGAGAGAAGTCCAGAGCCGAAGCCGAGGTGGAATCCAAAACCGGAACAGATTCGGATTCTGGAAGGGATCTTCAACTCAGGGATGGTGAATCCTCCAAGAGATGAGATCCGAAAGATCAGAGCTCAGCTTCAAGAGTATGGTCAAGTTGGTGACGCTAATGTCTTTTACTGGTTCCAGAATCGTAAGTCCAGAAGCAAACACAAACTTCGCAACCTCCAAAACTCCAACAAGAAGATCGCAATGGAATCATCATCAATAACCCCACCGCCGCCTCCCCCTCAGTTTTCTCCTTCCAATTCTTCATCATCTGATAACAAATCTTCTCCCAGTTCTTCTTCCAAGGAAATAATCAGTATTCTTCCTTCTTTCAAACCGCCATCATCATCTTCATTCTCCACTAATGGCTTCTCTTCTGATATAATCCTTCCAAGTTCTCCTACTTCTGGTGGTGGTTCTTCTGTGAGTAATTATCACCACCCCACCACATATTTTCAGACCCATAATAATGTGACTTCTCTTTCTGAGCCTTTCTTCTTTCCTGCTTCTTCTTCTGCTTCAACTCATCAAGGGTTTTGCTTCTCTGAGCTGTCTGGTCTTGTTCAGCATCAAAACGTTGGGCCTTGCACTAGTCTCTTGCTCAGTGAGATGATGAATAATCAGAAGAAAGAACAAGATCATAACAAGAATAATATGAAGAGTACTATAATGAATCATCATCATCATCTTAGTTTCTGTGTGGCAGCTTCTTCTTCTGTAACTCCCACCATTCATCACAGTCCCGTTGTGCCTTCTACCACTAGTCTCACTGTTCCATCCCTCTTCGTCCCTCAAATTCAAGGGGAGGAGGCAAGTGGTACGGCGGCGAAATCTATTGTATACATAAACGACGTCGCATTTGAAGTGGCTGCTGGTCCCTTCAACGTGGGTGCGGCTTTTGGGGAAGACGCGGTTCTAGTGCACGCGGCAACAGGGCACCCTGTCCTCACCAACGAGTGGGGCGTCACCCTCCAGTCACTCCAGCACGGCGCATTTTATTATCTGATATAG 1221 0.4726 MASSNRHWPSMFKSKPCNPHHHHPWHHDMNSSSLISSATTTCHRTPHSSSSSSSSGCEERSPEPKPRWNPKPEQIRILEGIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRNLQNSNKKIAMESSSITPPPPPPQFSPSNSSSSDNKSSPSSSSKEIISILPSFKPPSSSSFSTNGFSSDIILPSSPTSGGGSSVSNYHHPTTYFQTHNNVTSLSEPFFFPASSSASTHQGFCFSELSGLVQHQNVGPCTSLLLSEMMNNQKKEQDHNKNNMKSTIMNHHHHLSFCVAASSSVTPTIHHSPVVPSTTSLTVPSLFVPQIQGEEASGTAAKSIVYINDVAFEVAAGPFNVGAAFGEDAVLVHAATGHPVLTNEWGVTLQSLQHGAFYYLI 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01276 406 CDD homeodomain 64 126 IPR001356 GO:0003677
Accr11g01276 406 Gene3D - 39 125 - -
Accr11g01276 406 SMART HOX_1 63 130 IPR001356 GO:0003677
Accr11g01276 406 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 406 IPR044557 GO:0003700|GO:0050793
Accr11g01276 406 MobiDBLite consensus disorder prediction 138 174 - -
Accr11g01276 406 FunFam WUSCHEL-related homeobox 11 65 132 - -
Accr11g01276 406 MobiDBLite consensus disorder prediction 37 72 - -
Accr11g01276 406 ProSiteProfiles 'Homeobox' domain profile. 61 126 IPR001356 GO:0003677
Accr11g01276 406 SUPERFAMILY Homeodomain-like 61 128 IPR009057 -
Accr11g01276 406 Pfam Homeodomain 65 125 IPR001356 GO:0003677
Accr11g01276 406 MobiDBLite consensus disorder prediction 156 174 - -
Accr11g01276 406 MobiDBLite consensus disorder prediction 37 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01276 Accr-Chr11 30889625 30892407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01276 1 135 Wox Gene Family AT2G33880 76.471 2.90e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Accr11g01276 Homeodomain 3.8e-14 CL0123