Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01274 ATGGCGTCTTCATCATCATCATCTTCCTCCCAACATACAGAGCTTCTTCCTCTTAACCATGATGACTCTCAAGACATGGTCATCTACCAAGTCCTCAATGAAGCCGACGCTCTTCCACCTAATTCTCATAGTACTCGTACTACTTCACCAATCCTTGGCCTTCATGGTGGTCAGGCTACCGCCAGGATCGCCAAGAAGAACTACCGGGGTGTGAGGAGGCGGCCGTGGGGGAAGTATGCGGCTGAGATACGGGACTCGGCTCGCCACGGGGCGAGGCTGTGGCTGGGGACATTTGAGACTGCAGAAGAAGCTGCCTTGGCTTATGACAGGGCTGCTTTCAGAATGAGAGGTTCTAAGGCTTTGCTTAATTTCCCTCCTGACTTTGTAGCTCCTTCTTCTTCTTCTCCTATTCTCAGCCCATCAGAAAGATTGAATAATAAGGCCTCTTTTAATTCTGATTCAAATGCTGTAAGTTCTGTTGAGAGTCGTAGTTGA 495 0.4909 MASSSSSSSSQHTELLPLNHDDSQDMVIYQVLNEADALPPNSHSTRTTSPILGLHGGQATARIAKKNYRGVRRRPWGKYAAEIRDSARHGARLWLGTFETAEEAALAYDRAAFRMRGSKALLNFPPDFVAPSSSSPILSPSERLNNKASFNSDSNAVSSVESRS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01274 164 Gene3D AP2/ERF domain 66 126 IPR036955 GO:0003700|GO:0006355
Accr11g01274 164 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Accr11g01274 164 PRINTS Ethylene responsive element binding protein signature 91 107 IPR001471 GO:0003700|GO:0006355
Accr11g01274 164 MobiDBLite consensus disorder prediction 131 164 - -
Accr11g01274 164 SUPERFAMILY DNA-binding domain 67 126 IPR016177 GO:0003677
Accr11g01274 164 PANTHER DNA-BINDING DOMAIN 40 147 IPR044808 GO:0003700|GO:0009873
Accr11g01274 164 SMART rav1_2 67 131 IPR001471 GO:0003700|GO:0006355
Accr11g01274 164 FunFam Ethylene-responsive transcription factor 2 66 126 - -
Accr11g01274 164 ProSiteProfiles AP2/ERF domain profile. 67 125 IPR001471 GO:0003700|GO:0006355
Accr11g01274 164 CDD AP2 66 127 IPR001471 GO:0003700|GO:0006355
Accr11g01274 164 Pfam AP2 domain 67 117 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01274 Accr-Chr11 30860493 30860987 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01274 16 125 AP2-EREBP Transcription Factor Family AT2G44840 54.310 5.98e-38 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr11g01274 AP2 3.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01274 K13433 - gmx:100811533 164.081