Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01264 ATGACTATTCCTGAAGCACTTTCAAGATTTTCGCTATTCTTTCTTCTGATCATCTCTACTTTTTTCTTTCATTCCTATGGAGATGGGTACACCAAAGTTATACGCATTGGCGCAATTATTGATGTTAACTCTCGTGTTGGTAAAGAACAGCAAATAGCCATGGAAATTGGAGCTCAAAAATATAATAACACGTCCAAGACTCACAAGCTGGCTCTTCATTTCAGAAACGCCTCTGAGGAAGCCTTCAGAGCCGTCTCTCTTGCTGAAGAGTTGATTGAAATGCAGAAAGTAGAAGTCATCATAGGGATGCATACATGGCAAGAAGCAGCTCTAGCGGCTGAAGTTGGAAGCCAAGCTCAAGTTCCAATCATATCCTTTGTATCACCAGCAATAACCCCACCTTTGACACAAAAACGCTGGCCTTATCTGGTTAGACTAGCTAACAATGTCACTGCACATGTAAAATGCATTGCAGATATGGTGAATGCTTTTAGTTGGCAAAGAGTAGTAGTAGTTTATGAAGAAGATGGCTATGTTGGTGGAGACTATGGGATGCTCTCTCTCCTTTCTGAGGCTCTTCAAGACATTGGTTCACTAATTGAACACCGTTTCGCGCTTCCACCAATTTCTTTTCTTCCGGATGTAGGAGAGCTAATCAATGAAGAGCTAAATAAGTTGGTAAACAAAACTCAATCTCGTGTTTTCATTGTTTTGCACTCATCCTTAGAAATGGTGACCCATTTGTTCAGAGAAGGTTCAAAGATGGGACTTGTGGATAAAGATTCAGCTTGGATAATCTCAGAGAGCATAACTGATTTGCTTGACTCTGTAGATAAGTCTGTCATTTCCTCCTATATGGGAGGGTCTTTAGGAATCAAGATGCATTACTCAGAAAAAAGCAGTGAGTATCAAGAATTTCAAGCTCAGTTCCGGAAAAAATTTCGTGCAAAGAATCCTGAGGAAGACAATAGCAACCCAGGATTTTATGCTTTGCAAGCATATGATAGCATCAAAGTTGTCATTGAAGCAGTAGAAAGAATGGCAAGGGACACAAGTAGCAGCCCACAAGCTTTGCTAAGAGAAATACTGTCTAGCAGTTTCAATGGTTTGAGTGGGGAAATTCAGTTTCAAGGAGGTCAGCTCTTGCAGAATCCAATCCTAAGGATAGTAAATGTAGTTGGCAAGAGTTATAAAGAAATAGACTTTTGGACTCAAGAAAATGGGTTCACCACAAGCCTGCCCACAGGAAAAAGTGAAGAAAATGCTACTGCTAACACACAAAGTTTGGTTGGTGTTTTGCAATGGCCAGGGAATTTGGACAGAACTCCTAAAGGTTGGAATATGCCTGCTAAAAGAAACCCAATGAAAATTGCAGTTCCAGGAAGAACTTCATTTTCAAAGTTTGTCAAGGTTGAATATGGAAAAAGTCCAGATCAGAATAAATATAGAGGATTCTGTATTGAGGTTTTCGACAAGGTGGTTGAGCTTTTGGGATATGATCTACCCTATGAGTTTCATCCCCTCAACGTAACTTATCCTGATATGGTTCAACTTGTGTATAACAAGACTTATGATGCAGTGGTTGGTGACATGACCCTACTAGCAGAGAGACTGCAATATGTGGATTTTACTGTGCCGTATGCAGAATCAGGATTGTCCATGGTAGTTCCAGTGAAGTCTCAAGAGTCAACATGGATGTTTCTAAAGCCATTCACCTGGCAAATGTGGGCGGTAACTGGTGCAATCTTGATTTACACTGTGTTAGTAGTTTGGTACCTTGAACAAGTACCTAATTCAGAGTTTCAAGGCAATTGGAAGAGACAATTCAGCACTGCTCTTTGGTTTACCTTCTCCTCCCTATTCTTTGCTCATAAGGAGCAAGTGCATAGCAACTTATCTCGTGTGGTGATGGCAGTGTGGCTTCTTCTAGTTATGGTTCTGAGCTCAAGCTACACGGCTAGCCTTTCTTCAATGCTAACAGTTCAACAACTGCAGCCAAACGTCACAAGCATCGAGTGGCTGAAGAAGAACAACTTGAAAATTGGTTGTGACGGTGACTCATTTGTTAGGACATACCTAGAGAAAATCGAAAAGTTCAAGCCAGAAAACATCATCAACATAAGTAGTGAATACAACTATGATAGGGTATTCAAAAACAAGTCAATAACAGCAGCTTTTCTCGAACTCCCTTATGAAAAAGTATACATAAGTACTTACTGCAACGGATATTCTGGCTCCACTCCAACCACCAAATTTGGAGGCCTAGGCTTTATGTTCCAAAAAGGCTCCCCAATGGCTAGAGATTTTTCTAAAGCAATATTGCTGCTTTCAGAGAAGGGAGAACTAACCAAGTTGGAAGCACAATGGTTATATCACTCAAACGAGTGCACCAACAACTCAAGCTCCAGTGATACACAAAGTCTAAAGCTCGAAAGTTTCTGGGCTCTCTTTGTCATTTCTGGGGTCACATCTACTATCTGTTTACTATTTTCTATCATTCAGTCACAAGGATTTTTTCAGCTAATTCAAAATATGACTCAAGAAGGCAATGGACTCCCAATTGATATGACAGCTTGGGTTAGAACACTTGAATTAGTTAAGCGGATTTATAGCAAAAAGCTTACTCAGAAAACTCATTTGTGCGGGCCCACTGATTCTCCTATGCATCAACAAGATACTGCACCCCCAGCATCAACAATTATTGTGCTTTCTTCAGCACCACCAGAGACACAAATGGAAACTCTGAATAATAGATAA 2757 0.4044 MTIPEALSRFSLFFLLIISTFFFHSYGDGYTKVIRIGAIIDVNSRVGKEQQIAMEIGAQKYNNTSKTHKLALHFRNASEEAFRAVSLAEELIEMQKVEVIIGMHTWQEAALAAEVGSQAQVPIISFVSPAITPPLTQKRWPYLVRLANNVTAHVKCIADMVNAFSWQRVVVVYEEDGYVGGDYGMLSLLSEALQDIGSLIEHRFALPPISFLPDVGELINEELNKLVNKTQSRVFIVLHSSLEMVTHLFREGSKMGLVDKDSAWIISESITDLLDSVDKSVISSYMGGSLGIKMHYSEKSSEYQEFQAQFRKKFRAKNPEEDNSNPGFYALQAYDSIKVVIEAVERMARDTSSSPQALLREILSSSFNGLSGEIQFQGGQLLQNPILRIVNVVGKSYKEIDFWTQENGFTTSLPTGKSEENATANTQSLVGVLQWPGNLDRTPKGWNMPAKRNPMKIAVPGRTSFSKFVKVEYGKSPDQNKYRGFCIEVFDKVVELLGYDLPYEFHPLNVTYPDMVQLVYNKTYDAVVGDMTLLAERLQYVDFTVPYAESGLSMVVPVKSQESTWMFLKPFTWQMWAVTGAILIYTVLVVWYLEQVPNSEFQGNWKRQFSTALWFTFSSLFFAHKEQVHSNLSRVVMAVWLLLVMVLSSSYTASLSSMLTVQQLQPNVTSIEWLKKNNLKIGCDGDSFVRTYLEKIEKFKPENIINISSEYNYDRVFKNKSITAAFLELPYEKVYISTYCNGYSGSTPTTKFGGLGFMFQKGSPMARDFSKAILLLSEKGELTKLEAQWLYHSNECTNNSSSSDTQSLKLESFWALFVISGVTSTICLLFSIIQSQGFFQLIQNMTQEGNGLPIDMTAWVRTLELVKRIYSKKLTQKTHLCGPTDSPMHQQDTAPPASTIIVLSSAPPETQMETLNNR 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01264 918 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 833 IPR015683 -
Accr11g01264 918 SUPERFAMILY Periplasmic binding protein-like II 431 791 - -
Accr11g01264 918 Pfam Bacterial extracellular solute-binding proteins, family 3 479 790 IPR001638 -
Accr11g01264 918 FunFam Glutamate receptor 564 702 - -
Accr11g01264 918 Gene3D - 446 563 - -
Accr11g01264 918 Pfam Ligand-gated ion channel 791 822 IPR001320 GO:0015276|GO:0016020
Accr11g01264 918 Gene3D - 743 798 - -
Accr11g01264 918 FunFam Glutamate receptor 450 564 - -
Accr11g01264 918 SMART GluR_14 456 792 IPR001320 GO:0015276|GO:0016020
Accr11g01264 918 Pfam Receptor family ligand binding region 60 393 IPR001828 -
Accr11g01264 918 CDD PBP1_GABAb_receptor_plant 35 413 IPR044440 -
Accr11g01264 918 Gene3D - 564 703 - -
Accr11g01264 918 CDD GluR_Plant 453 790 - -
Accr11g01264 918 PIRSF IGluLR_plant 5 879 IPR017103 -
Accr11g01264 918 Gene3D - 36 385 - -
Accr11g01264 918 FunFam Glutamate receptor 153 324 - -
Accr11g01264 918 SUPERFAMILY Periplasmic binding protein-like I 31 446 IPR028082 -
Accr11g01264 918 Gene3D - 149 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01264 Accr-Chr11 30597340 30601521 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01264 10 829 Ion Channels AT2G29120 33.216 3.37e-147 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01264 - - gmx:100818619 1130.93