Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01263 ATGGTGACCCATTTGTTCAGAGAAGGTTCAAAGATGGGACTTGTGGATAAAGATTCAGCTTGGATAATCTCAGAGAGCATAACTGATTTGCTTGAGTCTGTGGATAAGTCTGTCATTTCCTCCTATATGGGAGGGTCTTTAGGAATCAAGATGCATTACTCAGAAAAAAGCAGTGAGTATCAAGAATTTCAAGCTCAGTTCCGGAAAAAATTTCGTGCAAAGAATCCTGAGGAAGACAATAGCAACCCAGGATTTTATGCTTTGCAAGCATATGATAGCATCAAAGTTGTCATTCAAGCAGTGGAAAGAATGGCAAGGGACACAAGTAGCAGCCCACAAGCTTTGCTAAGAGAAATACTGTCTAGCAGTTTCAATGGTTTGAGTGGGGAAATTCATTTTCAAGCAGGTCAGCTCTTGCAGAATCCTATCCTAAGGATAGTTAATGTAGTTGGCAAGAGTTATAAAGAAATAGACTTTTGGACTCAAGAAAATGGGTTCACCACAAGCCTGCCCACAGGAAAAAGTAAAGAAAATGCTACTGCTAACACACCAAGTTTGGTTGGTGTTTTGCAATGGCCAGGGAATTTGGACAGAACTCCTAAAGGTTGGAATATGCCTGCTAAAAGAAACCCAATGAAAATTGCAGTTCCAGGAAGAACTTCATTTTCAAAGTTTGTCAAGGTTGAATATGGAAAAAGTCCAGATCCGAATAAATATAGAGGATTCTGTATTGAGGTTTTCGACAAGGTGGTTGAGCTTCTGGGATATGATCTACCCTATGAGTTTTATCCCCTCAACGTAACTTATCCTGATATGGTTCAACTTGTGTATAACAAGACTTATGATGCAGTGGTTGGTGAAATGACCCTACTAGTAGAGAGACTGCAATATGTGGATTTTACTGTGCCGTATGCAGAATCAGGATTGTCCATGGTAGTTCCAGTGATGTCTCAAGAGTCAACATGGATGTTTCTAAAGCCATTCTCCTGGCGAATGTGGGCGATAACTGGTGTAATCTTGATTTACACTGTGTTAGTAGTTTGGTACCTTGAACGAGTACCTAATCCAGAGTTTCAAGGCAATTGGAAGAGACAATTCAGCACTGCTCTTTGGTTTACCTTCTCCTCCCTATTCTTTGCTCATAAGGAGCAAGTGCATAGCAACTTATCTCGTGTGGTGATGGTAGTGTGGCTTCTTCTAGTTATGGTTCTGAGCTCAAGCTACACGGCTAGCCTTTCTTCAATGCTAACAGTTCAACAACTACAGCCAAACGTCACAAGCATCGAGTGGCTGAAGAAGAACAACATGAAAATTGGTTGTGATGGTGATTCATTTGTTAGGACATACCTAGAGAAAGTCGAAAAGTTCAAGCCAGAAAACATCATCAACATAAGTCATGAATACGACTATGATAGTGTATTCAAAAACAAGTCAATAGCAGCAGCTTTTCTCGAACTCCCTTATGAAAAAGTATACATAAGTACTTACTGCAACGAATATTCTGGCTCCACACCAACCACCAGATTTGGAGGCATAGGCTTTATGTTCCAAAAAGGCTCCCAAATGGCCAAAGATTTTTCTAAGGCAATATTGCAGCTTTCAGAGAAGGGAGAACTAACCAAGTTGGAAGCACAATGGTTATATTACTCAAATGAGTGCATCAACAACTCAAGCTCCAGTGATACACAAAGTCTAAAGCTCGAAAGTTTCTGGGTTCTCTTTGTGATTTCTGGGGTCACATCTACTATTTGTTTCCTATTTTCTATTATTCAGTCGCAAGGATTTTGCCAGCTAACTCAAAATTTGACTCAATAA 1815 0.4006 MVTHLFREGSKMGLVDKDSAWIISESITDLLESVDKSVISSYMGGSLGIKMHYSEKSSEYQEFQAQFRKKFRAKNPEEDNSNPGFYALQAYDSIKVVIQAVERMARDTSSSPQALLREILSSSFNGLSGEIHFQAGQLLQNPILRIVNVVGKSYKEIDFWTQENGFTTSLPTGKSKENATANTPSLVGVLQWPGNLDRTPKGWNMPAKRNPMKIAVPGRTSFSKFVKVEYGKSPDPNKYRGFCIEVFDKVVELLGYDLPYEFYPLNVTYPDMVQLVYNKTYDAVVGEMTLLVERLQYVDFTVPYAESGLSMVVPVMSQESTWMFLKPFSWRMWAITGVILIYTVLVVWYLERVPNPEFQGNWKRQFSTALWFTFSSLFFAHKEQVHSNLSRVVMVVWLLLVMVLSSSYTASLSSMLTVQQLQPNVTSIEWLKKNNMKIGCDGDSFVRTYLEKVEKFKPENIINISHEYDYDSVFKNKSIAAAFLELPYEKVYISTYCNEYSGSTPTTRFGGIGFMFQKGSQMAKDFSKAILQLSEKGELTKLEAQWLYYSNECINNSSSSDTQSLKLESFWVLFVISGVTSTICFLFSIIQSQGFCQLTQNLTQ 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01263 604 Pfam Receptor family ligand binding region 2 150 IPR001828 -
Accr11g01263 604 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 7 588 IPR015683 -
Accr11g01263 604 Gene3D - 211 321 - -
Accr11g01263 604 Gene3D - 498 555 - -
Accr11g01263 604 Pfam Ligand-gated ion channel 548 579 IPR001320 GO:0015276|GO:0016020
Accr11g01263 604 SUPERFAMILY Periplasmic binding protein-like II 188 549 - -
Accr11g01263 604 SUPERFAMILY Periplasmic binding protein-like I 3 203 IPR028082 -
Accr11g01263 604 Gene3D - 1 82 - -
Accr11g01263 604 CDD GluR_Plant 210 547 - -
Accr11g01263 604 FunFam Glutamate receptor 207 321 - -
Accr11g01263 604 Gene3D - 322 460 - -
Accr11g01263 604 SMART GluR_14 213 549 IPR001320 GO:0015276|GO:0016020
Accr11g01263 604 FunFam Glutamate receptor 321 459 - -
Accr11g01263 604 Gene3D - 97 210 - -
Accr11g01263 604 Pfam Bacterial extracellular solute-binding proteins, family 3 236 547 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01263 Accr-Chr11 30559150 30567393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01263 4 586 Ion Channels AT2G29120 33.717 9.89e-109 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01263 - - pcin:129285988 955.281