Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01257 ATGGCTATTCCTGAAGCAGTTGCAAGATTTTGGCTATTCTTTCTTCTGCTCTCTTTTTTCTTTCATTCCTATGGAGATGGGTACACCAAAGTTACACGCATTGGCGCAATTATTGATGTTAACTCTCGTGTTGGTAAAGAACAGCAAATAGCCATGGAAATTGGAGCTCAAAAATATAATAACACGTCCAAGGCTCACAAGCTGGCTCTTTATTTCAGAAACGCCTCTGAGGAAGCCTTCAGAGCCGTCTCTCTTGCTGAAGAGTTGATTGAAATGCAGAAAGTAGAAGTCATCATAGGGATGCATACATGGCAAGAAGCAGCTCTAGTGGCTGAAGTTGGAAGCCAAGCTCAAGTTCCAATCATATCCTTTGTATCACCAGCAATAACCCCACCTTTGACACAAAAACGCTGGCCTTATCTGGTTAGACTAGCTAACAATGTCACCGCACATGCGAAATGCATTGCAGATATAGTGAATGCTTTTAGCTGGCAAAGAGTAGTAGTAGTTTATGAAGAAGATGGCTATGCTGGGATGCTCTCTCTCCTTTCTGAGGCTCTTCAAGACATTGGTTCACTAATTGAGCACCGTTTAGCGCTTCCACCAATTTCTTTTCTTCCGGATGTAGGAGAGCTAATCAATGAAGAGCTAAATAAGTTGGTGAACAAAACTCAATCTCGTGTTTTCATTGTTTTGCACTCTTCCTTAGAAGTGGTGACCCATTTGTTCAGAGAAGGTTCAAAGATGGGACTTGTGGATAAAGATTCAGCTTGGATAATCTCAGAGAGCATAACTGATTTGCTTGACTCTGTGGATAAGTCTGTCATTTCCTCCTATATGGGAGGGTCTTTAGGAATCAAGATGCATTACTCAGAAAAAAGCAGTGAGTATCAAGATTTTCAAGCTCAGTTCCGGAAAAAATTTCGTGCAAAGAATCCTGAGGAAGACAATAGCAACCCAGGATTTTATGCTTTGCAAGCATATGATAGCATCAAAGTTGTCATTGAAGCAGTAGAAAGAATGGCAAGGGACACAAGTAGCAGCCCACAAGCTTTGCTAAGAGAAATACTGTCTAGCAGTTTCAATGGTTTGAGTGGGGAAATTCATTTTCAAGCAGGTCAGCTCTTGCAGAATCCAATCCTAAGGATAGTAAATGTAGTTGGCAAGAGTTATAAAGAAATAGACTTTTGGACTCAAGAAAATGGGTTTACCACAAGCCTGCCCAGAGGAAAAAGTGAAGAAAATGCCTCTGCTAGTGCTAACACACAAAGTTTGGTTGGTGTATTGCAATGGCCAGGGAATTTGGAGAGAACTCCTAAAGGTTGGAATATGCCTGTTAAGCGAAACCCAATGAAAATTGCACTTCCAGGAAAATCTTCATTTCCAAAGTTTGTCAAGGTTGAATATGGAAAAAGTCCAGATCAGAATCAATATAGAGGATTCTGTATTGATGCTTTCAACAAGGTGCTTGAGCTTTTGGGATATGATCTTCCCTATGAGTTTCATCCCCTCAACGTAACTTTTCCTGATCTGGTTCAACTTGTGTACAACAAGACTTATGATGCAGTGGTTGGTGATGTGACCATACTAGCAGAGAGACTGCAATATGTGGATTTTACTGTGCCATATACAGAATCAGGATTGACCATGGTAGTTCCAATGAAGTCTCAAGAGTCAACATGGATGTTTCTAAAGCCATTCACCTGGCAAATGTGGGCGGTAACTGGTGCAATCTTGATTTACACAGTGTTAGTAGTTTGGTACCTTGAACGAGAACCAAATCCAGAGTTTCAAGGCAACTGGAAGAGACAATTCAGCACTGCCCTTTGGTTTACCTTCTCCTCCCTATTCTTCGCTCATAAGGAGCAAGTGCGTAGCAACTTATCTCGTGTGGTGATGGCAGTGTGGCTTCTTCTAGTTATGGTTCTGAGCTCAAGCTACACAGCTAGCCTTTCTTCAATGCTAACAGTTCAACAACTGCAGCCAAGCGTCACAAGCATCGAGTGGCTGAAGATGAACAACATGAAAATTGGTTGTGGTGGTACCTCATTTATGAGAACATACCTAGAGAAAGTCGAAAATTTCAAGCCAGAAAACATCATCACCATAACTAGTGAATACAATTATGATGCTTCATTCAAAAACAAGTCAATAACAGCAGCTTTTTTCGAACTCCCTTATGCAAAAATATACTTGAGTACTTACTGCAAGGGATATTCTGGCTCCACACCAATCACCAGATTTGGAGGCCTAGGCTTTATATTCCAAAAAGGCTCCCCAATGGCCAGAGATTTTTCTAAAGCATTATTGCAGCTTTCAGAGAAGGGAGAACTAACCAAGTTGGAAGCACAATGGTTATATCACTCAAACGAGTGCACCAACAACTCAAGCTCCAGTGATACACAAAGTCTAAAGCTCGAAAGTTTCTGGGCTCTCTTTGTCATTTCTGGGGTCACATCTACTATCTGTTTCCTATTTTCTATTATTCAGTCGCAAGGATTTTGCCAGCTAACTCAAAATTTGATTCAAGAAGGCAATGGACTCACAAGTGGGATAAGAACACTTGAATTAGCAAAGTGGATTTACAGCAAAAAGCTTACTCAGGAAACTTATTTGTACAGGCCTAATATTGGGACACAACAAGATGTAACTGACTGTTCTTCCAGATGGGACGATGTCAGCACCACTGATTCTCCTATGCATCAACAAAATACTGCACCCCTAGCATCAACAGCCATTGTGCTTTCTTCACCACCACCAGAGACACAAATGGAAACCCTAGATAATAGATAA 2793 0.411 MAIPEAVARFWLFFLLLSFFFHSYGDGYTKVTRIGAIIDVNSRVGKEQQIAMEIGAQKYNNTSKAHKLALYFRNASEEAFRAVSLAEELIEMQKVEVIIGMHTWQEAALVAEVGSQAQVPIISFVSPAITPPLTQKRWPYLVRLANNVTAHAKCIADIVNAFSWQRVVVVYEEDGYAGMLSLLSEALQDIGSLIEHRLALPPISFLPDVGELINEELNKLVNKTQSRVFIVLHSSLEVVTHLFREGSKMGLVDKDSAWIISESITDLLDSVDKSVISSYMGGSLGIKMHYSEKSSEYQDFQAQFRKKFRAKNPEEDNSNPGFYALQAYDSIKVVIEAVERMARDTSSSPQALLREILSSSFNGLSGEIHFQAGQLLQNPILRIVNVVGKSYKEIDFWTQENGFTTSLPRGKSEENASASANTQSLVGVLQWPGNLERTPKGWNMPVKRNPMKIALPGKSSFPKFVKVEYGKSPDQNQYRGFCIDAFNKVLELLGYDLPYEFHPLNVTFPDLVQLVYNKTYDAVVGDVTILAERLQYVDFTVPYTESGLTMVVPMKSQESTWMFLKPFTWQMWAVTGAILIYTVLVVWYLEREPNPEFQGNWKRQFSTALWFTFSSLFFAHKEQVRSNLSRVVMAVWLLLVMVLSSSYTASLSSMLTVQQLQPSVTSIEWLKMNNMKIGCGGTSFMRTYLEKVENFKPENIITITSEYNYDASFKNKSITAAFFELPYAKIYLSTYCKGYSGSTPITRFGGLGFIFQKGSPMARDFSKALLQLSEKGELTKLEAQWLYHSNECTNNSSSSDTQSLKLESFWALFVISGVTSTICFLFSIIQSQGFCQLTQNLIQEGNGLTSGIRTLELAKWIYSKKLTQETYLYRPNIGTQQDVTDCSSRWDDVSTTDSPMHQQNTAPLASTAIVLSSPPPETQMETLDNR 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01257 930 PIRSF IGluLR_plant 2 906 IPR017103 -
Accr11g01257 930 FunFam Glutamate receptor 560 698 - -
Accr11g01257 930 Gene3D - 34 379 - -
Accr11g01257 930 SMART GluR_14 450 788 IPR001320 GO:0015276|GO:0016020
Accr11g01257 930 Pfam Receptor family ligand binding region 58 387 IPR001828 -
Accr11g01257 930 SUPERFAMILY Periplasmic binding protein-like I 31 442 IPR028082 -
Accr11g01257 930 CDD PBP1_GABAb_receptor_plant 33 407 IPR044440 -
Accr11g01257 930 Gene3D - 560 702 - -
Accr11g01257 930 Pfam Bacterial extracellular solute-binding proteins, family 3 475 786 IPR001638 -
Accr11g01257 930 FunFam Glutamate receptor 446 560 - -
Accr11g01257 930 Gene3D - 445 559 - -
Accr11g01257 930 Pfam Ligand-gated ion channel 787 818 IPR001320 GO:0015276|GO:0016020
Accr11g01257 930 SUPERFAMILY Periplasmic binding protein-like II 427 787 - -
Accr11g01257 930 Gene3D - 147 401 - -
Accr11g01257 930 FunFam Glutamate receptor 151 318 - -
Accr11g01257 930 CDD GluR_Plant 449 786 - -
Accr11g01257 930 Gene3D - 737 794 - -
Accr11g01257 930 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 829 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01257 Accr-Chr11 30418965 30423206 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01257 10 825 Ion Channels AT2G29120 32.629 2.08e-141 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01257 - - gmx:100818619 1124