Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01255 ATGAATTCAGATCGAAGCCTTTTGCTTCTTTTTGCTGCGTTCGGTTCCATTATTCTCCTTCTCATCAATTGCTTCCCAGGGGCTTCAGCAGATAACAGTAATAATGGAATCAATATTGATGTTGGTGCAATTATTGATTTCAATTCTCAAGTTGGAAAACAACAGAAAGAAGCCATGGAAATTGCAGCTCAAAGCTTTAACAACTATTCAAACAACCTCAACATATCCCTCCATTTCCGGAACTCTCTAAGAAATCCATTACAGGCAGCTTCTGCTGCTGAACAACTAATAAATGAAACAAAAGTTAAAGCTATCATTGGAATGGAGACATGGGAGGAAGCAGTTTTTGTAGCTGAACTTGGAGATAAAGCTCAAGTTCCTGTAATTTCATTCTCATCTCCTTCAATATCCTCACCACCTTCATCAATCCCATTTCGTTGGCCTTTCTTGGTTCAAATGGCCAAGAATCAGACAGCTAATATAAATTGCATAGCTGATATTGTTCATGCATATGGCTGGCAAAAAGTTATAGCCATATATGAAGATGATTCTTATAGTACTGATTCTTCAGGAAGGTTAGCCCTCCTTTCTGAAGCCCTCTTGAAGACTAATTCTCAAATTGAGCGTAGACTTGTCCTCCCACCATTTTCTTCATTATCTGATCCAAAAGGCTTTGTTCTTGATGAACTTATTGAGATATTATTATCAGCAAAATCTAGGGTTTTCATTGTTCTCAAAGCATCATTACCTATGGTTACTCATTTGTTTAGAGAAGCTAAGAAACTAGGGTTCTTAGGGAAAAACTCAGTTTGGATTGTTAATGAAGATATTGCTGACTTGTTGGACTCAGCCAATGAGAGTGTCTTATCCTCCATGGAAGGTATCATTGGAATCAAAAGCTATTATTCTACTACTTCAAGTGATTATACTAAGTTCATAGAAAAATTACAAAACCAGTCTCATCCATCAGCAGCATTCTATGCACTGCAAGCTTATGATAGCATCACGATGGTCGGAAAAGCCCTACAGAAGATGAATGGAACTAATAACTCGAGATTATTCTTCAAGAAAATGCTGTCTAGTAACTTCACTGGGTTAACTGGTGACATAAGGTTCAAGGAAGGCCATTTATCACAGACTCCAATTTTAAGAGTGATAAACGTGGTTAACAATAAATACACAGAATTGGATTTTTGGGTACCAAATTTGAAGTTCTTTAAATCTCTGCAAGACATAGAGAAAGGAAGTGATGTTGCTAGAAATATTCTTAATGGTCCAGTGGTTTGGCCTGGAGGTCTAACGACTCTAAACAATAATGATAATGTTCCATTAGGATGGAACATACCTTCAGAAAAAAATCCTTTAAAAGTGAGAATTCCTTTAAAGCCTGCTTTCGAGAATTTTGTGAAGGAAGAATCTCAAGGAAAATATGTTGGTCTGTGTATTGAAATTTTTGAAATCATTCAAGAACTACTCAAAGATAAATACTCTGGTCTGCCATACGAATATCGTCCCTTTGATAATGTATCTTATGATGAGGTTCTACAAAATTTCGCCGACCTGGAGGATGATGCTATTGTTGGAGATGTAACAATACTTGAGGCTCGATCAAAGAATGTGTCGTTCACACAACCATATTCAGAGTCAGGTTTATCACTCATACTTCCAGCTGAGAGAGAAGGCACGACATTTCTGTTCGCGAAGCCATTTAGTTGGCAAATGTGGCTAGCCACTGGTGCCATCTTCTTCTACACAACGCTTGCTATCTGGTTTCTTGAGCATCCCTTAAACCCTAGCTTTAAAGGATCATGGAAAAATCAACTCAGCAACACTTCTTGGTTCGCATTTTCTTCCCTATTCTTCGCACACGGGGGTAAAGTGTACAGTAACTCAGCAAGAGTGGTGGTTGCTGTCTGGCTATTTCTGGTGTTCGTTTTGACTTCAAGCTACACTGCAAGTTTGTCTTCTATGCTCACTGTGCAACGCATGAATACTGGGAGAGGTGTTGAGTGGCTGAAGGAAAATAAGTTAACAGTTGGCTGTGATAATAGCAGTCAATTTGTGAGGAACTACTTGCTCGATGTCTATGACTTTCCTGAAGAGCAGATCTTAAGTCTTGATGGTGAACCTGACTTTGTGGCCAACTTTAAGAGCAAACGAATTTCTGCTCTCTTCCTTGAGAGCCCTTATGAAAAGGTTTTCTTAAACAAGTATTGCAATCAATATACTGCAACTGCTGCTGGCTTGTTAGAATTCAAACTCTCCTCACCGTCCAGAAGCTATGTGGAAATCTGA 2295 0.3865 MNSDRSLLLLFAAFGSIILLLINCFPGASADNSNNGINIDVGAIIDFNSQVGKQQKEAMEIAAQSFNNYSNNLNISLHFRNSLRNPLQAASAAEQLINETKVKAIIGMETWEEAVFVAELGDKAQVPVISFSSPSISSPPSSIPFRWPFLVQMAKNQTANINCIADIVHAYGWQKVIAIYEDDSYSTDSSGRLALLSEALLKTNSQIERRLVLPPFSSLSDPKGFVLDELIEILLSAKSRVFIVLKASLPMVTHLFREAKKLGFLGKNSVWIVNEDIADLLDSANESVLSSMEGIIGIKSYYSTTSSDYTKFIEKLQNQSHPSAAFYALQAYDSITMVGKALQKMNGTNNSRLFFKKMLSSNFTGLTGDIRFKEGHLSQTPILRVINVVNNKYTELDFWVPNLKFFKSLQDIEKGSDVARNILNGPVVWPGGLTTLNNNDNVPLGWNIPSEKNPLKVRIPLKPAFENFVKEESQGKYVGLCIEIFEIIQELLKDKYSGLPYEYRPFDNVSYDEVLQNFADLEDDAIVGDVTILEARSKNVSFTQPYSESGLSLILPAEREGTTFLFAKPFSWQMWLATGAIFFYTTLAIWFLEHPLNPSFKGSWKNQLSNTSWFAFSSLFFAHGGKVYSNSARVVVAVWLFLVFVLTSSYTASLSSMLTVQRMNTGRGVEWLKENKLTVGCDNSSQFVRNYLLDVYDFPEEQILSLDGEPDFVANFKSKRISALFLESPYEKVFLNKYCNQYTATAAGLLEFKLSSPSRSYVEI 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01255 764 Gene3D - 156 399 - -
Accr11g01255 764 Pfam Bacterial extracellular solute-binding proteins, family 3 467 741 IPR001638 -
Accr11g01255 764 SUPERFAMILY Periplasmic binding protein-like I 39 431 IPR028082 -
Accr11g01255 764 Pfam Ligand-gated ion channel 571 675 IPR001320 GO:0015276|GO:0016020
Accr11g01255 764 Pfam Receptor family ligand binding region 55 389 IPR001828 -
Accr11g01255 764 Gene3D - 564 690 - -
Accr11g01255 764 FunFam Glutamate receptor 563 693 - -
Accr11g01255 764 CDD PBP1_GABAb_receptor_plant 40 409 IPR044440 -
Accr11g01255 764 Gene3D - 450 563 - -
Accr11g01255 764 Gene3D - 42 380 - -
Accr11g01255 764 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 745 IPR015683 -
Accr11g01255 764 FunFam Glutamate receptor 160 325 - -
Accr11g01255 764 SUPERFAMILY Periplasmic binding protein-like II 445 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01255 Accr-Chr11 30323946 30328152 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01255 3 743 Ion Channels AT2G29120 30.877 2.27e-101 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01255 - - pcin:129285797 1085.48