LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr11g01253	ATGAATTCAGATCGAAGCCTTTTGCTTCTTTTTTCTGCTTTCGATTCCATTATTCTCCTTCTCATCAATTGCTTCCCAGGGGCTTCAGCAGATAACAATAATAATGGAATCAATATCGATGTTGGTGCAATTATTGATTTCAATTCTCAAGTTGGAAAACAACAGAAAGAAGCCATGGAAATTGCAGCTCAAAGCTTTAACAACTATTCAAACAGCCTCAACATATCCCTCCATTTCCGTGACTCTCGAAGAAGTCCATTACAGGCAGCTTCTGCTGCTGAACAACTAATAAATGAAACAAAAGCTAAAGCTATCATTGGAATGGAGACATGGAAGGAAGCAGCTTTTGTAGCTGAACTTGGAGATAAAGCTCAAGTTCCTGTAATTTCATTCTCATCTCCTTCAATATCCTCACCACCCTCATCAATCCCATTTCGTTGGCCTTTCTTGATTCAAATGGCCAAGAATCAGACAGCTAATATAAATTGCATAGCTGATATTGTTCATGCATATGGCTGGCAAAACGTTATAGCCATATATGAAGATGATTCTTATAGTACTGATTCTTCAGGAATGTTAGCCCTCCTTTCTGAAGCCCTGTTGAAGACTAATTCTCAAATTGAGCGTAGACTTGTCCTCCCACCATTTTCTTCTTTATCTGATTCAAAAGGGTTTGTTCTTGATGAACTTATTGAGCTATTATTATCAGCAAAATCTAGGGTTTTCATTGTTCTCAAAGCATCATTACCTATGGTTATTCATTTGTTTAGAGAGCAATGTTCTTAA	786	0.3728	MNSDRSLLLLFSAFDSIILLLINCFPGASADNNNNGINIDVGAIIDFNSQVGKQQKEAMEIAAQSFNNYSNSLNISLHFRDSRRSPLQAASAAEQLINETKAKAIIGMETWKEAAFVAELGDKAQVPVISFSSPSISSPPSSIPFRWPFLIQMAKNQTANINCIADIVHAYGWQNVIAIYEDDSYSTDSSGMLALLSEALLKTNSQIERRLVLPPFSSLSDSKGFVLDELIELLLSAKSRVFIVLKASLPMVIHLFREQCS	261

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr11g01253	261	Pfam	Receptor family ligand binding region	55	245	IPR001828	-
	Accr11g01253	261	SUPERFAMILY	Periplasmic binding protein-like I	39	244	IPR028082	-
	Accr11g01253	261	PANTHER	OS06G0188250 PROTEIN	16	257	-	-
	Accr11g01253	261	Gene3D	-	38	219	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr11g01253	Accr-Chr11	30283208	30284755	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr11g01253	3	244	Ion Channels	AT2G29120	29.675	2.33e-27	108

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr11g01253	-		-	pcin:129285797	354.369