Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01252 ATGTGGCTAGCCACTGTTGCCATCTTCTTCTACACGACGCTTGCTATCTGGTTTCTTGAGCATCCCTTAAACCCGAGCTTTAAAGGATCATGGAAAAATCAACTCAGCAACACTTCTTGGTTCGCCTTTTCTTCCCTATTCTTCGCTCACGGGGGTAAAGTGTACAGTAACTCAGCAAGAGTGGTGGTTGCTGTCTGGCTATTTCTGGTGTTCGTTTTGACTTCAAGCTACACAGCAAGTTTGTCTTCTATGCTCACTGTGCAACGCATGAATACTGGGAGAGGCGTTGAGTGGCTGAAGGAAAATAAGTTAACTGTTGGCTGTGATAATAGCAGTCAATTTGTGAGGAACTACTTGCTCGATGTCTATGACTTTCCTGAAGAGCAGATCTTAAGTCTTGATGGTGAACCTGACTTTGTGGCCAAGTTTAAGAGCAAACGAATTTCTGCTCTCTTCCTTGAGAGCCCTTATGAAAAGGTTTTCTTAAACAAGTATTGCAATCAATATACTGCAACTGCTGCTGGCTATAAATTTGGAGGCCTGCGCTTTGTATTCCAAAGAGACTCTCCGTTGGTGAAAGACTTTTCTGAAGGCATTTTAAGGTTAGCAGAGAATGGAACTCTAAAACTTTTGGAAGAAAAATGGTTGACCCCTTCCAATAACTGCTCAAGTGACTCAACGTCCTCGTCTTCTGAAACCGAAAGCCTATCCATTGCCGACTTTTGGATTCTCTATGTGATAAGTGGTCTCACTTCCACCATCTTCTTGATCATTGCTCTGTTTAGAACTTACCTTCATCAACAGAAAGAATGTGAAGACAATAATAATATAGAAGCTTCCGATGATAATAATAATGGTGTTTGGAAGAAGTCACTCGGGAAACTCACTTCAGGGCTCTACAACAATATCGGCAGTTTCAATTTCAACACTATAGGAAGAGCTGCAACTTTTGGTGGAACAGAAACTGTTCGCCATTGGAATTCTTCGAGGTGGGAGAGTGTAAGAACATCTGATCATTTTAATCCTCGACGGACCCAATCGGTTGGCTTAGAAATGTTGTAG 1062 0.4209 MWLATVAIFFYTTLAIWFLEHPLNPSFKGSWKNQLSNTSWFAFSSLFFAHGGKVYSNSARVVVAVWLFLVFVLTSSYTASLSSMLTVQRMNTGRGVEWLKENKLTVGCDNSSQFVRNYLLDVYDFPEEQILSLDGEPDFVAKFKSKRISALFLESPYEKVFLNKYCNQYTATAAGYKFGGLRFVFQRDSPLVKDFSEGILRLAENGTLKLLEEKWLTPSNNCSSDSTSSSSETESLSIADFWILYVISGLTSTIFLIIALFRTYLHQQKECEDNNNIEASDDNNNGVWKKSLGKLTSGLYNNIGSFNFNTIGRAATFGGTETVRHWNSSRWESVRTSDHFNPRRTQSVGLEML 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01252 353 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 278 IPR015683 -
Accr11g01252 353 Gene3D - 179 215 - -
Accr11g01252 353 Gene3D - 140 178 - -
Accr11g01252 353 Gene3D - 1 118 - -
Accr11g01252 353 Pfam Bacterial extracellular solute-binding proteins, family 3 74 217 IPR001638 -
Accr11g01252 353 FunFam Glutamate receptor 1 128 - -
Accr11g01252 353 SUPERFAMILY Periplasmic binding protein-like II 72 221 - -
Accr11g01252 353 SMART GluR_14 18 218 IPR001320 GO:0015276|GO:0016020
Accr11g01252 353 Pfam Ligand-gated ion channel 1 249 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01252 Accr-Chr11 30225855 30228236 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01252 1 277 Ion Channels AT2G17260 34.173 6.38e-50 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01252 - - pcin:129285797 520.776