Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01226 ATGTCGTCCCGAGTAGAGGCCATTTTCGACTCCGCAAGAAGCCACAACAAAAAACTGTTGCAGTCCGTCAACCGAAGTGTGGTGGTTGCTGGCTCCGTGGTTGTCAGTCAGGATGGAAGCGAAAACTTCACCATCAACGTTGTCCCTAACAACACAGCTTCCGATGCCAATTACTTCTTGATATTCATCACTGCTGGCGAGTACCAAGAATACGTATTCATACTCAAATACAAACAATACTTGATGCTAGTGGGAGATGGCATCAACCACACCATCATCATAGGCGACCACAACGTCGTCGATGGTTATACAACGTTTGACTCCGCGACATTTGTTGTGGGGGCACAAGGATTCGTGGCGTTGAACATTACCTTCCGTAACACAACGGGGGCGACCAAGAACCAAGCCGTTGCCATGAGGAGCGGGGCAGACAAGTTCGTATTCTACCTCTGTAGCTTCGAAGGGTACCAAGACACTTTAGAGTGTCTTGGTAAGGAATAG 501 0.485 MSSRVEAIFDSARSHNKKLLQSVNRSVVVAGSVVVSQDGSENFTINVVPNNTASDANYFLIFITAGEYQEYVFILKYKQYLMLVGDGINHTIIIGDHNVVDGYTTFDSATFVVGAQGFVALNITFRNTTGATKNQAVAMRSGADKFVFYLCSFEGYQDTLECLGKE 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01226 166 PANTHER PECTINESTERASE 20 160 - -
Accr11g01226 166 Gene3D - 27 165 IPR012334 -
Accr11g01226 166 Pfam Pectinesterase 33 160 IPR000070 GO:0030599|GO:0042545
Accr11g01226 166 SUPERFAMILY Pectin lyase-like 27 160 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01226 Accr-Chr11 28881631 28882229 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01226 27 160 Carbohydrate Esterase AT1G02810 58.273 4.70e-51 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01226 K01051 - gmx:100813051 204.912