Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01203 ATGGGGAAACCGGAGAAGAAAGGGAAAAAACAACTATTGGTGGAATTAATTCTCTGGTCTGTAGCTAAATTTGTACTGGGAGCCCCGTGTGCTTTAATATTCTTGATTCTTCGATGGAGAAGAAGGCATCAATCTTACTATGACAATGTTGAGGACTTCCTCCAAAATAATAGTAACTTGATGCCCATCAAGTACTCTTACTCGGAGATCAAGAAAATGACCAATTCCTTCAAACACAAATTAGGTGAAGGAGGCTATGGTTATGTTTATAAAGGTAAACTTCGAAGCAATCGCGATGTGGCTGTCAAGTTACTGGGAAAGTCTAAATCCAATGCACAAGATTTCATTAGCGAAGTTGCCACTATTGGCAGGATTCATCATGTCAATGTGGTGCAGCTGATTGGATTTTGTGCTGAAAGAAATAAGCAAGCTCTTGTTTATGAGTTTATGTCTAATGGATCTCTTGACAAATATATATTCTCAGAGAAACAAGGGAATACGCCCATTAATTATGAGAAAATATTCAACATTTCTCTTGGGATTGCTCGAGGAATTGAATATTTACATCGAGGATGTGACATGCAAATTCTACACTTCGATATCAAGCCTCACAATATCCTTCTTGATGAAAACTTCAATCCAAAGGTTTCAGATTTTGGGTTGGCAAAGTTATACCCATTAGACAATAGTATTGTATCTCTGACAAATGCAAGAGGAACATTTGGATACATGGCACCTGAATTTTTGTACAAGAACTTTGGAGGGATATCACACAAATCTGATGTTTATAGTTTTGGGATGCTGCTAATGGAAATGGCTGGTAGAAGGAAGAACTCGAATGTCATTGAGCATTCGTGGCAAACCTATTTTGCTAAATGGGTTTATGATCAATTTGAGGAATCAATAGAGGAGAGCAATATCACTGGTGAAGAAAGGGGAATCACAAAGAAGATGATCATAATAGCTTCACATTGCATACAGATGTATCCTAATGATCGACCCTCGATGAAGAATGTGATAGAGATGCTTGAGGGAGAAATTGAGCTCCAAGAAGCTCTTCCACCTTAA 1068 0.3801 MGKPEKKGKKQLLVELILWSVAKFVLGAPCALIFLILRWRRRHQSYYDNVEDFLQNNSNLMPIKYSYSEIKKMTNSFKHKLGEGGYGYVYKGKLRSNRDVAVKLLGKSKSNAQDFISEVATIGRIHHVNVVQLIGFCAERNKQALVYEFMSNGSLDKYIFSEKQGNTPINYEKIFNISLGIARGIEYLHRGCDMQILHFDIKPHNILLDENFNPKVSDFGLAKLYPLDNSIVSLTNARGTFGYMAPEFLYKNFGGISHKSDVYSFGMLLMEMAGRRKNSNVIEHSWQTYFAKWVYDQFEESIEESNITGEERGITKKMIIIASHCIQMYPNDRPSMKNVIEMLEGEIELQEALPP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01203 355 Gene3D Phosphorylase Kinase; domain 1 39 149 - -
Accr11g01203 355 Gene3D Transferase(Phosphotransferase) domain 1 150 352 - -
Accr11g01203 355 ProSitePatterns Protein kinases ATP-binding region signature. 81 103 IPR017441 GO:0005524
Accr11g01203 355 Pfam Protein tyrosine and serine/threonine kinase 77 343 IPR001245 GO:0004672|GO:0006468
Accr11g01203 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Accr11g01203 355 SMART serkin_6 75 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01203 355 ProSiteProfiles Protein kinase domain profile. 75 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01203 355 FunFam serine/threonine-protein kinase PBS1-like 43 149 - -
Accr11g01203 355 FunFam PR5-like receptor kinase 150 353 - -
Accr11g01203 355 PANTHER RUST RESISTANCE KINASE LR10-RELATED 44 350 IPR045874 GO:0004672
Accr11g01203 355 SUPERFAMILY Protein kinase-like (PK-like) 55 344 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01203 Accr-Chr11 28386578 28392327 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01203 64 354 Receptor kinase-like Gene Family AT5G38280 54.333 1.11e-107 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr11g01203 PK_Tyr_Ser-Thr 3.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01203 - - tpra:123914142 491.886