Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01201 ATGTTTCCAAAAAGCCCCCATAAAGGACCATCAAAAAAGATAGTACTCGCTGGTGAAATCCTAGGCCCATTTCTGCTCGTATTTGTTGGCTTTATTGTTTATTGGGTCCATGCAGCTATTGTGGATAGGCAAGGTTGCATAAAAATTAAATATTTTTTGGAAGACTACAACGCACTTAGGTCTGCTAGATACTCGTATGCAGATATAAAGAGGATCACAAATCAGTTCAAGGATGAACTTGGACAAGGAGCTTATGGAACTGTGTTCAAAGGGAAGCTATCGAATGAGATTCAGGTGGCTGTCAAGCTTCTAAACACTTCAACAGGGAATGGACAAGAGTTCATCAATGAAATGGAGACCATGTGCCAAATTCACCATGTCGATGTGGCTCGCTTGGTTGGCTACTGTGCCGATGGATTCAAACGAGCTTTGGTTTATGAGTTTTTACCCAATGGTTCATTGCAGAAATTCATAACTTCAGCTGATAGAGAAGACCTTTTCCTGGGTTGGGGAAAGCTTCATGATGTTGCTCTTGGCATAGTGAAAGGAATTGAGTATCTTCATGAAGATTGTGACAAACGGATCCTCCACTTTGATATCAAACCTCATAATATTCTTTTAGATGACAAATTCACACCAAAGATATCTGATTTCGGTTTGGCCAAACTTTGTTCTAAGGATCAAAGTATTGTGTCAATGACAACAGCTAGGGGAACTCTGGGTTACATTGCACCCGAGATATTCTCTAGAAACTTTAGCAATGTATCTTATAAATCAGATGTCTACAGTTATGGAATACTGCTCCTTGAAATGGTTGGAGGAAGGAAAATCACAGATGTCACAGAAGAAAATGGCGACCAAGTTTACTACCCACAATGGATTTATAATCTTCTAGAGAACAATGAAGACATACAAATTCATATAGAAGGAGAGGAGGACACTAAAATTGCAAGGAAGCTATCAATTGTTGGACTTTGGTGCATTCAATGGCATCTGGCAAATCGTCCAACCATGAAAAATGTGGTTCAAATGTTGGAAGGGGATGACGGAAAGCTAATTATGCCTCCCAATCCTTTTGGCTCTTCACACACAGCTAGAACAAGAGCTGCTAATGGAGTAAGGCGATTGCAACTAGAGTTATCTGTCATTTCTAAAATAGAGTCAAGTGGAGATGGTTGA 1179 0.3986 MFPKSPHKGPSKKIVLAGEILGPFLLVFVGFIVYWVHAAIVDRQGCIKIKYFLEDYNALRSARYSYADIKRITNQFKDELGQGAYGTVFKGKLSNEIQVAVKLLNTSTGNGQEFINEMETMCQIHHVDVARLVGYCADGFKRALVYEFLPNGSLQKFITSADREDLFLGWGKLHDVALGIVKGIEYLHEDCDKRILHFDIKPHNILLDDKFTPKISDFGLAKLCSKDQSIVSMTTARGTLGYIAPEIFSRNFSNVSYKSDVYSYGILLLEMVGGRKITDVTEENGDQVYYPQWIYNLLENNEDIQIHIEGEEDTKIARKLSIVGLWCIQWHLANRPTMKNVVQMLEGDDGKLIMPPNPFGSSHTARTRAANGVRRLQLELSVISKIESSGDG 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01201 392 Gene3D Transferase(Phosphotransferase) domain 1 149 352 - -
Accr11g01201 392 ProSiteProfiles Protein kinase domain profile. 74 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01201 392 PANTHER RUST RESISTANCE KINASE LR10-RELATED 48 363 IPR045874 GO:0004672
Accr11g01201 392 Gene3D Phosphorylase Kinase; domain 1 53 148 - -
Accr11g01201 392 SMART serkin_6 74 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01201 392 Pfam Protein kinase domain 77 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01201 392 SUPERFAMILY Protein kinase-like (PK-like) 58 346 IPR011009 -
Accr11g01201 392 FunFam PR5-like receptor kinase 149 356 - -
Accr11g01201 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Accr11g01201 392 ProSitePatterns Protein kinases ATP-binding region signature. 80 102 IPR017441 GO:0005524
Accr11g01201 392 FunFam serine/threonine-protein kinase PBS1-like 50 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01201 Accr-Chr11 28341011 28342369 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01201 63 359 Receptor kinase-like Gene Family AT5G38280 50.993 3.24e-105 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr11g01201 Pkinase 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01201 - - tpra:123914140 594.349