Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01176 ATGTCAGAAGACGAACACGAGATTTATAATGACAAAGATAAGTGTGAGGAAACTTCTTTGGGATCTTCTTCTCAGAAATGTTCATCGTTCGACTTGAATGAGGAAGCTACCAGTGAAGAAGAAGAAGATGAACAAGAACAAGATGAGGAAGAGGAAGAGGAAGAAGAGGAGGAGGAGAAGGAGAAAATAATAATGAAGGAGCATGAAGGAACTTCATCATCAAACAGAAGCACATCTAGAGAACGAAATAATAATGAAGGGAAAAGCACAGTGAGACAGTATGTGAGATCCAAGATGCCTAGGCTTCGTTGGACTCCAGATCTTCATCTCTCTTTTGTTCATGCTGTTAAACGCCTTGGTGGTCAAGAGAGAGCAACACCCAAGTTGGTGCTTCAGCTAATGAATGTGAGAGGACTCAGCATTGCTCATGTGAAAAGTCATTTGCAGATGTATCGGAGTAAAAAACTTGATGAGGCTGGCCAAGTGATAAGTCAAACCTACAGATCCTCCTCGCAAGTTGGTCGTATATCTCATCAGCTATCGTATCAATCAGTAAATACAAGGCAACAATTCAAAATGGGAAACGGTGGAATTATTCTAGCTACCAATTACAACGACCATGGTGGTTTTGTTCATCATCATGCTCTCTCCAAGCCTTCTTTTACCCTTTCACACTCACATTCAATGGCTACAGATTCAAGGCACCAACAATGGCACTTGAATAACCAGTGGGATAATAGAAGGAAAAGTTGCACGACAAGCAACGAAGTGATGATGATGCCCTCAACAACAGAACGAATTGCACCCATGAGACCGAGCCAATTTCTGGAAGAGAAAAAGTGGCCTCCATTACAAATTATTGCCAATAATAATAATAATAATAAACATTATTGGAAGTTCAAGAAAATACTGCCTACGACCGGTAATATTATTAATTCTTGGCTGGATACTAATAATAATGTTATGAAGGATTCATTACAATCTGGATTTCACCGACTTGCCACGACGCATGCACCTGTAAAGCCAACTGATGAACCATGGAGTTTTGGAAATTTAAACAGTAGCAGCAACAGTAGTTCCAAGAGTTTGAAGCTAGAATTTGAGCCCCCATTTCGGATTAAGTTAAATGAAGAGAAAGAGGAGAAAGACGCGCGATCTTTGCCTAATCTGCAACTGGGATTGAATTATCAGAGTGCTGATCATTGCAAGGACACCCAAGAAATTAACACTAAGCTTTCCCTTTCTTAG 1248 0.4022 MSEDEHEIYNDKDKCEETSLGSSSQKCSSFDLNEEATSEEEEDEQEQDEEEEEEEEEEEKEKIIMKEHEGTSSSNRSTSRERNNNEGKSTVRQYVRSKMPRLRWTPDLHLSFVHAVKRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVISQTYRSSSQVGRISHQLSYQSVNTRQQFKMGNGGIILATNYNDHGGFVHHHALSKPSFTLSHSHSMATDSRHQQWHLNNQWDNRRKSCTTSNEVMMMPSTTERIAPMRPSQFLEEKKWPPLQIIANNNNNNKHYWKFKKILPTTGNIINSWLDTNNNVMKDSLQSGFHRLATTHAPVKPTDEPWSFGNLNSSSNSSSKSLKLEFEPPFRIKLNEEKEEKDARSLPNLQLGLNYQSADHCKDTQEINTKLSLS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01176 415 MobiDBLite consensus disorder prediction 61 87 - -
Accr11g01176 415 MobiDBLite consensus disorder prediction 1 93 - -
Accr11g01176 415 MobiDBLite consensus disorder prediction 34 60 - -
Accr11g01176 415 MobiDBLite consensus disorder prediction 339 362 - -
Accr11g01176 415 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 79 214 IPR046955 GO:0003700
Accr11g01176 415 MobiDBLite consensus disorder prediction 1 19 - -
Accr11g01176 415 FunFam Myb family transcription factor 98 156 - -
Accr11g01176 415 Pfam Myb-like DNA-binding domain 102 152 IPR001005 -
Accr11g01176 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 156 IPR017930 -
Accr11g01176 415 NCBIfam myb-like DNA-binding domain, SHAQKYF class 100 155 IPR006447 GO:0003677
Accr11g01176 415 Coils Coil 33 69 - -
Accr11g01176 415 MobiDBLite consensus disorder prediction 347 362 - -
Accr11g01176 415 SUPERFAMILY Homeodomain-like 98 154 IPR009057 -
Accr11g01176 415 Gene3D - 99 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01176 Accr-Chr11 26682921 26688064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01176 91 159 G2-like Transcription Factor Family AT2G42660 81.159 2.01e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr11g01176 Myb_DNA-binding 8.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01176 - - pcin:129286853 545.428