Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01175 ATGCCGATTCGAGTGGAAGCATCACCGTCCTTTCGCTGTCCCACTAAAACCAAGTATAGATTCGATGTTTTCCTGAGTTTTAGAGGTGTAGATACTCGCCACACCTTCACTGATCCTCTCTATGATGCTCTGCGACGTAAGGGAATCAACGCCTTCATTGATGACAAGAAGCTTGGGAAAGGGGAAGAGATCTCACCTACGCTTCTCAAAGCCATAGAGAGATCAAGGATCTCGATTATTGTGTTCTCTAAGAACTATGCTACTTCCACATGGTGCCTAGAGGAACTTGCCCACATCATTTGGTGTAAGAAGCTGAAGAACCAGCTGGTTATGCCCATCTTTTACAAGGTGGATCCGTCGGATGTTCAATATCAGAGAAATAGCTTTCAGGAAGCCATGGCTGCTCTTGAAGATAGGTTCAGAAATGACTTGGACAAAGTGTGCAAATGGAGGTCTGCTTTGTTTGAAGCTGCTAGCTTATCATCTGCATGGCTTTTTGATGATGGATGCAAATTTGGGTTTATCAAAAGGATTGTGGAAGATGCATATGCTATGCTACCACCAAAACCTTTACATAGCATTGATCACACAGTTGGACTTGATTCTCGCATTGAAGAAGTGAAATCACTTTTAGGTCAGTCTCATAATGGTGTTTGTATGTTGGGGATACATGGAACTGGTGGAATTGGCAAAACAACACTTGCCAAGGCTCTGTATAATTCAATGTTTTACCAGTTTGAAGGTTCATGTTTTCTATTTGGTGTCAGAGAAGCATCAAAGGAATATCGAGGCATAGTTCGTCTCCAACAATTACTTTTATCTGAGATTCTTGAAGAGAAGAGTAAGAAGTTCGGTAGTGTTGGTGAAGCAATATGTAAAATAAAACACAGACTCTCCCACAAAAGAGTTCTATTAGTTCTTGATGATGTTGATGAGGTAGAACAACTAGAACAACTAGCAGGAAGGTGTAACTGGTTTGGATCTGGAAGCAAGATCATTATAACTACGAGAAATAAGCAATTATTATTTGCACATGGTGTTCAAGAAACTTATGAAATGAAAGAGCTAAATGAGCATGAGTCTCTTGAGCTGTTTTGTTGGCATGCTTTTCGCATGAGGCAACCTCCAAAAGCCTATGAAGATATGTCTATTCATGTGATCAATTATGCACAGGGCCTTCCTTTGGCTCTAAGAGTAATAGGCTCCAATTTGACTCATAAAAGCTTAGAGGAATGGAGATCAATGTTGGAACGATATGAGAGGATCCCAGATAAGAACATTCATGAGGTACTAAAGATAAGTTATGATTACTTACAAGACAATGCCAAGTCTATTTTTCTAGATGTTGCGTGTTTCTTCAAGAAGTGGAGATTAGTATGTGCCAATGAAATACTACACGCTTGTCATGGTGGCGCGATGTTTTATATAGAAGTGCTCATTGAAAAATCATTGGTGAGTATTGATAAACATGATTGCTTGTGGATGCATGATCTAATACAAGAAATGGGTCGAGAAATTGTTAGACAGGAGGCACCAACAAACCCTTGCGAACGCAGCAGATTATGGGATCATGAAGATGTTCTTAGAGTATTACGTGAAAATTCTGGAAGCAGCAAAATTGAAGGAATAATGCTTAAATCTCCTCAACAAGAAGTAGCATGGAGTGGCTTTGCCTTTGAGAAGATGAGCAATCTTAGGATACTCATTATACGAAATGCACTCTTTTCAACCGGCCCTAGGCACTTTCCAAACAATTTAAGATTGCTTGATTGGGAGGGATACCCGTCTGTGACCTTACCTGAGGACTTTTATCCTGAGAACATTGTAGTCCTTAGGTTACGTCGTAGTTATATCCGATTGGTAGAGCCAATCAAGAGGTTAGAATATTTGACAAACATGCTTTTCTCAGAATGTGAATTTATAACTGAAGTACCTGATATGTCTCAAGCCCCAAATTTGAAAGAACTGATAGTTGTAGACTGTTGCAATTTGATCAAGGTTCATGATTCTGTGGGATCTCTCCCAAAGTTAGAGGTATTGAAGGTCAATGGCTGCAGAAAACTTAAAAGCTTTCCTCATGAAATCAAGTTGGTGTCTCTTGAACACCTTGACCTCACTTTTTGTGAGAGTCTTGTTTACTTCCCAAATATAGTGGGAAAGATGGATGCATTGATCACCATTTTTGCAGATAATACTGCCATTGAAGAACTCCCACATTCCATTGGAAATCTTTCGGGGCTTCAAGTTTTATCTCTCAACTCCTGCAGAAGTCTTGGGGAGGTTCCAGACAAAATATTCATGCTGGAAAATCTTGTCTGGCTTTTTTTGGGAGAAAGTAAACCTCATAGCAGAAAATCCTTGAAGAGGTCAATGCAAGATAGCCACCCAATTATTAGAAGCACGAACTTAAAGATCGTGAATCTTGAAAATTGTGGTATATTGGATGAAGATCTTCACCTAACTATGAATTGTTTTCGGAATTTGCAAGAATTAAATTTAGCAGGGAATGATATTGTGTCCCTTCCAGAGTACATAAAAGAGTGTGCTTATTTGGAGAAACTAGAACTGAGTGACTGCAAGAGGCTAAGAGACATTCCGGAGCTGCCATCAACCCTGGAGGAGATAGTAGCAGACAATTGCATATCGTTGACAAGAAAGTCCTTAAGGCATTTATGGTTTCAGGCAAGAAAGGAAATGTGCCATTTGCTAATCAGTATGCCAGCATCAACATTTCCAGATTGGCTCAACTTTTGCTGGAAAGGAGGGACCTTGTCTTTTCATGTTCGTGGGAAATTCCCAGTGTTTGCCTTAGCATTTGAGTTTGATAAAGCAGGTGCAAGTGTCGGATCAAGGCCTGGAAGGGAACTTGAAATCCCTGTTTCTAATCAGAGAGTCCGTTGTCGGATGAGCATCAATGGTCAGGAAGTATCAAAGCTAGGACATAATATAGTCCTTCCACTCATCGAAGGTCATGTGTGTGTTACTGATATAAGACGAGCTTTTCTGGACAAAGAATACTGTAAGGGCTTGGATAGGTTTCTGGAATTGGATTGGAATCATGTGGAAATAGAAGCCAAATGTAATACACCAGATTTGTGCATAGCCAAGTGTGGAGTTTATGTGTACCAATGGCAAACAAACATGGAGAATGTGCAGTTCAAGTCGTCTTTGCTTTCTACCCATGATCCGACAAAAACTTTGAAACGAAGGGCTATAGCTTCTCTTTCTAATGGAAAAACAAAAAGTTTCAAGGCTCTTGACAATTGA 3267 0.4004 MPIRVEASPSFRCPTKTKYRFDVFLSFRGVDTRHTFTDPLYDALRRKGINAFIDDKKLGKGEEISPTLLKAIERSRISIIVFSKNYATSTWCLEELAHIIWCKKLKNQLVMPIFYKVDPSDVQYQRNSFQEAMAALEDRFRNDLDKVCKWRSALFEAASLSSAWLFDDGCKFGFIKRIVEDAYAMLPPKPLHSIDHTVGLDSRIEEVKSLLGQSHNGVCMLGIHGTGGIGKTTLAKALYNSMFYQFEGSCFLFGVREASKEYRGIVRLQQLLLSEILEEKSKKFGSVGEAICKIKHRLSHKRVLLVLDDVDEVEQLEQLAGRCNWFGSGSKIIITTRNKQLLFAHGVQETYEMKELNEHESLELFCWHAFRMRQPPKAYEDMSIHVINYAQGLPLALRVIGSNLTHKSLEEWRSMLERYERIPDKNIHEVLKISYDYLQDNAKSIFLDVACFFKKWRLVCANEILHACHGGAMFYIEVLIEKSLVSIDKHDCLWMHDLIQEMGREIVRQEAPTNPCERSRLWDHEDVLRVLRENSGSSKIEGIMLKSPQQEVAWSGFAFEKMSNLRILIIRNALFSTGPRHFPNNLRLLDWEGYPSVTLPEDFYPENIVVLRLRRSYIRLVEPIKRLEYLTNMLFSECEFITEVPDMSQAPNLKELIVVDCCNLIKVHDSVGSLPKLEVLKVNGCRKLKSFPHEIKLVSLEHLDLTFCESLVYFPNIVGKMDALITIFADNTAIEELPHSIGNLSGLQVLSLNSCRSLGEVPDKIFMLENLVWLFLGESKPHSRKSLKRSMQDSHPIIRSTNLKIVNLENCGILDEDLHLTMNCFRNLQELNLAGNDIVSLPEYIKECAYLEKLELSDCKRLRDIPELPSTLEEIVADNCISLTRKSLRHLWFQARKEMCHLLISMPASTFPDWLNFCWKGGTLSFHVRGKFPVFALAFEFDKAGASVGSRPGRELEIPVSNQRVRCRMSINGQEVSKLGHNIVLPLIEGHVCVTDIRRAFLDKEYCKGLDRFLELDWNHVEIEAKCNTPDLCIAKCGVYVYQWQTNMENVQFKSSLLSTHDPTKTLKRRAIASLSNGKTKSFKALDN 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01175 1088 SUPERFAMILY L domain-like 494 893 - -
Accr11g01175 1088 PRINTS Disease resistance protein signature 220 235 - -
Accr11g01175 1088 PRINTS Disease resistance protein signature 742 758 - -
Accr11g01175 1088 PRINTS Disease resistance protein signature 297 311 - -
Accr11g01175 1088 PRINTS Disease resistance protein signature 390 404 - -
Accr11g01175 1088 Gene3D Ribonuclease Inhibitor 555 727 IPR032675 -
Accr11g01175 1088 SMART till_3 20 160 IPR000157 GO:0007165
Accr11g01175 1088 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 187 - -
Accr11g01175 1088 Gene3D Ribonuclease Inhibitor 728 906 IPR032675 -
Accr11g01175 1088 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 765 IPR044974 GO:0006952
Accr11g01175 1088 Pfam TIR domain 21 164 IPR000157 GO:0007165
Accr11g01175 1088 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 448 IPR027417 -
Accr11g01175 1088 Gene3D - 15 188 IPR035897 -
Accr11g01175 1088 Gene3D - 189 350 IPR027417 -
Accr11g01175 1088 FunFam Disease resistance protein (TIR-NBS-LRR class) 357 439 - -
Accr11g01175 1088 ProSiteProfiles TIR domain profile. 19 182 IPR000157 GO:0007165
Accr11g01175 1088 Gene3D - 355 439 IPR042197 -
Accr11g01175 1088 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 160 IPR035897 -
Accr11g01175 1088 ProSiteProfiles Leucine-rich repeat profile. 827 848 IPR001611 GO:0005515
Accr11g01175 1088 Pfam NB-ARC domain 203 435 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01175 Accr-Chr11 26660694 26664740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01175 5 861 WRKY Transcription Factor Family AT4G12020 29.807 7.64e-91 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01175 - - pcin:129284776 1212.98