Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01171 ATGGCGGTTCAAGTAGCATCGTCCTCTTGGGCTGGCTTCACCAGCAAAACTAAGTATAGATACGACGTTTTCCTGAGTTTCAGAGGCGAAGATACTCGCAAATGCTTCACTGTGAATCTCTATGATGCTTTGCGCAAGAAGGGAATAAACGCCTTCATTGATGACAAGAAGCTCGGTAAAGGGGAACAAATCGCACCTTCTCTTCTAAAAGCCATAGAGAAATCCAGGATTTCGATTATTGTGTTCTCTAAGAACTACGCAACTTCCACTTGGTACCTTGATGAACTGGCTCACATCATTCAGTGCAAGAAGAAGAAGAACCAGGTGGTCATGCCCTTATTTTACAAGGTGAATCCGATAGATGTTCAATATCAGAAAAATAGCTTTGAGGAAGCCATGGGTGCTCTTGAAGAAAGGTTCAGAAATGAGGTAGAGAAAGATAGAAAGAGCTTTGAGGAAGACAGAGCTGCTTATGAAGATAGGGTGAGAAAGAACCTGGAGAAACTGCAAAAATGGAGGTCTGCTTTGTTTGAAGCTGCTAGTTTGTCATCGGCATGGCTTTTCCAAGATGGATGCGAATTTCGGTTTATTGAAAGGATTGCTGAACATGTATATGATATGCTTCCTCCTAAGCCAAAACATAACATAGAACACATGGTTGGACTTGAGCCTCGAATAGAAGAAGTGATCTCACTTCTAAATAAATCTGACAATGGCGTTTGCATGCTGGGGATTTATGGAACTGGTGGAATTGGTAAAACAGCCCTTACAAAAGCTATCTATAATTCAATCTTCTACCGTTTTGATGGTGCTTGTTTCTTGTTAGATGTCAATGAAGCATCAAAGAAATTCCAGGGCATTGCTAATCTTCAACAAAAACTTCTATCTGAGATTCTTCAGGAAAAGATCACAAGGTTTGGTAGTGCTGGCCAAGGAATATCTAGAATAAAACACAGACTCTCTCATAAAAGAGTTTTGTTGGTTATTGATGATGTTGATGAGATTGAACAGTTAGAACAACTTGTAGGGGGGTGTGATTGGTTTGGCTGTGGAAGCAAGGTCATTATAACAACAAGAAATAAGCAATTACTAATTGCTCATAATGTTAAAAGAACATATGAATTGAAGGAGCTAGATGATTGTAACTCTTTTGAGCTTTTTTGTCGGCATGCCTTTCATATGAGCCTACCTCCAAAAGGCTATCATCAAATGTCTAGTCATGTGATAAGTTACGCAAAGGGCCTTCCCCTGGCATTAAAATTAATTGGTGCCAATTTAGCAAATAAAAACAAAAAGGAATGGACGTCTATATTGGAACAATATGATCAGATCCCAGAAAGAACAATACATGAAGTATTGAAGATAAGTTATGATTGCTTACAAGATGGTGCGAAGATTATTTTCTTGGATGTTGCTTGTTTCTTTAAAGATGAGACGTTGAATTCTCTTGGTGAAATGGTACAAGCGTGTTATTCTGGTGCAAGGTTTTATATTGATGTGCTTATTGATAAATCTCTTGTAGCTATTGATGAGAATGGTCGTTTATACATGCATGGTCTCATAAAACAAATGGGCAGAGAGATTGTGAGGAAGGAGGAACCATCGAATCCTGGCAAACATAGTAGGTTATTCAATTATAAAGATGTTCTTAAAGTACTGCATGAAAATTCGAGATTTGAATGTTTGACATGTATGAATCTATCACAGTGTGCATTCATAATTGAAGTACCTGATATGTCTGAATTCCAAAGTTTAAGAAAATTGTCTTTTAGCGACTGTCACAATTTGATCAAAGTTCACGATTCTGTGGGATATCTCTCTAAGCTGGTTGAATTAGATGTTTGTGGATGTGTCAATCTTACAAGCTTTCCAAATGAAATCAATATGCCATCTCTTGAAGTTATTGATTTGGGTCATTGCGAGAGTCTTGACTACTTCCCAAATATAGTGGGAAAGATGGAAGAATTAAGGAATATCTGGGCTGATTGGACTTCTATTAAGGAGCTCCCACCTTCCATTGGAAATCTTATGGGGCTTGATGTTTTAGATTTAAGCAATTGCAAAAGTCTTAGGGAGCTTCCAAATGGCTTATTCACGGTTCCAAATATTGATATGCTTCATTTGGGAGGCAGTAAACTTGGTTGCAGAAAATTGCTAGAGAAATTGATGCAAGAGAGCCAACAAGTTATTGGCTGCACAAACGCGCATACATTGGATCTCCAAGATTGTTGTTTATTGGATGAAGATATTCACCCAACTCTGAATCTTTTCCAGAATTTGATAGAGTTAAATCTATCAGGGAATGATTTTGTGTCCCTTCCTGAGTGCCTGAAAGATTGTGTTCAGTTGTGGGACTTGGATGTGAGTAACTGCAAGAGGCTAAGAAATATACCAGAGTTACCATCAAGTTTGTCGAATATAAAGGCACGGAGTTGCTTTTCATTAACTACAGAGTCATTAAGCCATTTATGGTCTCTAGTTTTTCATAAGGAGTTGAATGATCTGAAGTTCATTTTCCCAGCAACAACATTTCCTGATTGGTTCCACAATTCGTGTGGAGGAGGGAAAATTTCTTTTCTTGCTCGTAGGAATTTTCCTCCTCTTGCCATTGCTCTTGAGCTTGGGAAAGCCAAAAGAAATTGGAGACAAGACTTACAAATTTCTCTGATCATCAATGGTCGTGTAGTATTACAGAATACACTTGGTGTCTATGATGCACAAGGTCATGTGGTTTTATTAAATCTAACACCGCATTTTTCGTCAGAAGATTGGAGGTGGCTTCAAAGATTATTCACGGAATCGGATTGGCATGATGTTGTGATACATGTCATCGGTGAAACGCCAGATATAATTGTGGTTGAGGGTGGAGTTTATGTGTACCAACATCAAACAAACATGAAGAATGTACAGTTCAAGTCTCCTTTGCTTTCAACAACACCACGGAAACGAAGAACCGTAGCTTCTGCTCCTATTGATAAATGA 2982 0.3846 MAVQVASSSWAGFTSKTKYRYDVFLSFRGEDTRKCFTVNLYDALRKKGINAFIDDKKLGKGEQIAPSLLKAIEKSRISIIVFSKNYATSTWYLDELAHIIQCKKKKNQVVMPLFYKVNPIDVQYQKNSFEEAMGALEERFRNEVEKDRKSFEEDRAAYEDRVRKNLEKLQKWRSALFEAASLSSAWLFQDGCEFRFIERIAEHVYDMLPPKPKHNIEHMVGLEPRIEEVISLLNKSDNGVCMLGIYGTGGIGKTALTKAIYNSIFYRFDGACFLLDVNEASKKFQGIANLQQKLLSEILQEKITRFGSAGQGISRIKHRLSHKRVLLVIDDVDEIEQLEQLVGGCDWFGCGSKVIITTRNKQLLIAHNVKRTYELKELDDCNSFELFCRHAFHMSLPPKGYHQMSSHVISYAKGLPLALKLIGANLANKNKKEWTSILEQYDQIPERTIHEVLKISYDCLQDGAKIIFLDVACFFKDETLNSLGEMVQACYSGARFYIDVLIDKSLVAIDENGRLYMHGLIKQMGREIVRKEEPSNPGKHSRLFNYKDVLKVLHENSRFECLTCMNLSQCAFIIEVPDMSEFQSLRKLSFSDCHNLIKVHDSVGYLSKLVELDVCGCVNLTSFPNEINMPSLEVIDLGHCESLDYFPNIVGKMEELRNIWADWTSIKELPPSIGNLMGLDVLDLSNCKSLRELPNGLFTVPNIDMLHLGGSKLGCRKLLEKLMQESQQVIGCTNAHTLDLQDCCLLDEDIHPTLNLFQNLIELNLSGNDFVSLPECLKDCVQLWDLDVSNCKRLRNIPELPSSLSNIKARSCFSLTTESLSHLWSLVFHKELNDLKFIFPATTFPDWFHNSCGGGKISFLARRNFPPLAIALELGKAKRNWRQDLQISLIINGRVVLQNTLGVYDAQGHVVLLNLTPHFSSEDWRWLQRLFTESDWHDVVIHVIGETPDIIVVEGGVYVYQHQTNMKNVQFKSPLLSTTPRKRRTVASAPIDK 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01171 993 Pfam TIR domain 21 176 IPR000157 GO:0007165
Accr11g01171 993 PRINTS Disease resistance protein signature 242 257 - -
Accr11g01171 993 PRINTS Disease resistance protein signature 319 333 - -
Accr11g01171 993 PRINTS Disease resistance protein signature 412 426 - -
Accr11g01171 993 PRINTS Disease resistance protein signature 674 690 - -
Accr11g01171 993 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 696 IPR044974 GO:0006952
Accr11g01171 993 Coils Coil 141 161 - -
Accr11g01171 993 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 209 - -
Accr11g01171 993 SUPERFAMILY L domain-like 553 825 - -
Accr11g01171 993 ProSiteProfiles TIR domain profile. 19 208 IPR000157 GO:0007165
Accr11g01171 993 Gene3D Ribonuclease Inhibitor 550 645 IPR032675 -
Accr11g01171 993 SMART till_3 20 182 IPR000157 GO:0007165
Accr11g01171 993 Gene3D - 207 373 IPR027417 -
Accr11g01171 993 Gene3D - 13 206 IPR035897 -
Accr11g01171 993 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 470 IPR027417 -
Accr11g01171 993 Gene3D - 377 461 IPR042197 -
Accr11g01171 993 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 139 IPR035897 -
Accr11g01171 993 Gene3D Ribonuclease Inhibitor 646 843 IPR032675 -
Accr11g01171 993 Pfam NB-ARC domain 225 444 IPR002182 GO:0043531
Accr11g01171 993 SUPERFAMILY "Winged helix" DNA-binding domain 448 553 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01171 Accr-Chr11 26537896 26542756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01171 220 817 WRKY Transcription Factor Family AT5G45050 28.488 7.38e-55 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01171 - - pcin:129284776 933.71