Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01165 ATGGCCATTCAAGTAGCAGCAACGTCATCCTTTGGCTTTAGTAGCAAAAGCAAGTATAGGTACGACGTATTCCTGAGTTTCAGAGGTGAAGACACTCGTAAATCCTTCACAGTGCATCTGTACGATGCTTTGCGCAGGAAGGGAATCAACGCCTTCATCGATGACAAGAAGCTCGGTAAAGGGGAACGAATCGCACCTGCGCTTCTTAAGGCCATCGAGAGATCGAGGATTTCAATTATTGTGTTCTCTAAGAACTACGCTACTTCAACTTGGTGCCTTGATGAACTGGCTCACATCATTAGATGTATGGAGGAGAAGAAGCAGCTGGTTGTGCCCATATTTTATAAGGTGGATCCAGTTGATGTTCAATATCAGAGAAATACCTTTCAGGAAGCCATGGCGGTTCATGAAGAAAGGTTCAGAGATGATTTACAGAAAGTGCGCAATTGGAGTTCTGCTTTGTTTGAAGCTGCTAGCTTATCATCAGCGTGGCTTTTCGTAGACGGGTACGACGAAGGTGTATTTATAGAAAGTATTGTGGAACATGCAAATGCTAGGCTACCTCCTAAACGCTTCCATAATATTGATTACATCGTTGGACTTGAGCCTTGTATTGAAGAACTGAAGCCACTTTTGAATGAAGCTGATGATAATAGTGTTTGTATGTTGGGGATTCATGGAATTGGTGGAATTGGCAAAATAACCCTTGCAAAAGCTCTCTATAATTCAATCTCCTATCGTTTTGAAGGTGCCTGTTTCTTGTTTGATGTCAACGAAGCATCAAAGAAATACAAGGGTATTGTTCACCTTCAACAAACACTTTTGTCAGAAATTCTTGAGGAGAAGAAGATGAAGTTTGGAAGTGTACACGAAGGAATATCAAAACTGAAACATAGACTCTCCCACAAAAAGGTTTTATTGGTTCTTGATGATGTTGATGAGGCTGAACAGCTGGAACAACTTGCAGGAGGGTGTGATTGGTTCGGTTGTGGAAGCAAGATCATTATAACAACAAGAAACAAGCAATTGCTTATTGCACGAAATGTTCAAAAAATATATGAAATGAAGGAGCTCAATGAGCATTACTCTCTTGAACTCTTTTCTTGGCATGCCTTTCGTTTGAGCCAACCTCCAAAATGCTACGAAAGTGTGTCCGTTGGTGTTACACGTTATGTACGTGGCCTTCCATTGGCTTTAAAATTGATAGGCTCCAATATGGCACATAGAAACTTAGAGGAATGCAGACAAATATTGGAAAGATATCAGCAAATCCCAGGAAGAACAATACTTGACATACTGAAAATAAGCTATGATTACTTACAAGATGCTGCTAAGCCTATTTTCATGGACATTGCTTGTTTCTTTAAAGATGAGAAGTTGAAATTTGTTGAAGACATACTAGGAACGTGTTATGATGGGACAAGGTTTTATATTGAAGTACTTGTGGATAAATCTCTGATAACTATTCATAATAATGGTTGCTTAGGGATGCATGTTCTAATACAACAAATGGGTAGAGAGATTATTAAGCAAGAAGCAGCCTCAAATATTGGCAAATGTAGCAGGTTATGGTATTATAAAGACGTGCTTAATGTGCTACGTGAAAATTTAGGAGGAAATGATATTGAAGGAATATTACTTGATCCACCTCAACAAGAAGAAGTGAGATGGAATGGTTTCGCCTTTGAGAAGATGAATAATCTTCGGATTCTTATTATGCGGAATACCCAATTTTCCACAAGTCCTAAGTATCTTCCCAATAGTTTGAGATTGCTTGATTGGCAGGGATATCCTTGTATGACTTTACCACCTGATTTTTCTCCTCCAAAATTAGTTTGCTTCAAGTTATATGGAAGTCTTTTCAAATTGGAAGAGCCATTCCAGGTACTTGCTTCACTCTTTTACTCTTTGATCAAAATTCTTGAGAGCCATAATGTTCTAAGAATCGAAGCATAA 1956 0.3885 MAIQVAATSSFGFSSKSKYRYDVFLSFRGEDTRKSFTVHLYDALRRKGINAFIDDKKLGKGERIAPALLKAIERSRISIIVFSKNYATSTWCLDELAHIIRCMEEKKQLVVPIFYKVDPVDVQYQRNTFQEAMAVHEERFRDDLQKVRNWSSALFEAASLSSAWLFVDGYDEGVFIESIVEHANARLPPKRFHNIDYIVGLEPCIEELKPLLNEADDNSVCMLGIHGIGGIGKITLAKALYNSISYRFEGACFLFDVNEASKKYKGIVHLQQTLLSEILEEKKMKFGSVHEGISKLKHRLSHKKVLLVLDDVDEAEQLEQLAGGCDWFGCGSKIIITTRNKQLLIARNVQKIYEMKELNEHYSLELFSWHAFRLSQPPKCYESVSVGVTRYVRGLPLALKLIGSNMAHRNLEECRQILERYQQIPGRTILDILKISYDYLQDAAKPIFMDIACFFKDEKLKFVEDILGTCYDGTRFYIEVLVDKSLITIHNNGCLGMHVLIQQMGREIIKQEAASNIGKCSRLWYYKDVLNVLRENLGGNDIEGILLDPPQQEEVRWNGFAFEKMNNLRILIMRNTQFSTSPKYLPNSLRLLDWQGYPCMTLPPDFSPPKLVCFKLYGSLFKLEEPFQVLASLFYSLIKILESHNVLRIEA 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01165 651 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 160 IPR035897 -
Accr11g01165 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 451 IPR027417 -
Accr11g01165 651 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 188 - -
Accr11g01165 651 Gene3D - 13 185 IPR035897 -
Accr11g01165 651 SMART till_3 20 160 IPR000157 GO:0007165
Accr11g01165 651 Pfam TIR domain 21 183 IPR000157 GO:0007165
Accr11g01165 651 Gene3D - 186 353 IPR027417 -
Accr11g01165 651 PRINTS Disease resistance protein signature 392 406 - -
Accr11g01165 651 PRINTS Disease resistance protein signature 563 579 - -
Accr11g01165 651 PRINTS Disease resistance protein signature 299 313 - -
Accr11g01165 651 PRINTS Disease resistance protein signature 222 237 - -
Accr11g01165 651 Gene3D - 357 441 IPR042197 -
Accr11g01165 651 SUPERFAMILY "Winged helix" DNA-binding domain 428 533 IPR036390 -
Accr11g01165 651 SUPERFAMILY L domain-like 517 647 - -
Accr11g01165 651 ProSiteProfiles TIR domain profile. 19 187 IPR000157 GO:0007165
Accr11g01165 651 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 622 IPR044974 GO:0006952
Accr11g01165 651 Pfam NB-ARC domain 205 422 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01165 Accr-Chr11 26346480 26349096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01165 17 622 WRKY Transcription Factor Family AT4G12020 30.929 4.63e-62 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01165 - - pcin:129284776 916.761