Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01163 ATGGCGGTTCAAGTAGCATCGTCATCTTCGGCTGGCTTCACCAGCAAAACTAAGTATAGATACGACGTTTTCCTGAGTTTCAGAGGCGAAGATACTCGCAAATGCTTCACTGTGAATCTCTATGATGTTCTGCGCAAGAAGGGAATAAACGCCTTCATTGATGACAAGAAGCTTGGTAAAGGAGAAAAAATCGCAACTTCTCTTCTAAAGGCCATAGAGAAATCCAGGATTTCGATTATTGTGTTCTCTAAGAACTACGCAAATTCCACTTGGTGCCTTGATGAACTGGCTCACATCATTCAGTGCAAGAAGGAGAAGAACCAGGTGGTTATGCCCTTATTTTACAAGGTGGACCCGATGGATGTTCAATATCAGAAAAATAGCTTTGAGGAAGCCATGGTTGCTCTTGAAGAAAGGTTCAGAAATGAGGTAGAGAAAGATAGAAACAGCTTTGAGGAACACAGAGCTGCATATGAAGACAGGGTGAGAAAGAACATGGAGAAACTGCAAAAATGGAGGTCTGCTTTGTTTGAAGCTGCTAGTCTGTCATCTGCTTGGTTTTTCCAAGATGGATGCGAATTTCGATTTATTGAAAGGATTGTTGAACATGTGTATGCTATGCTTCCTCCGAAGCCCTACCATAACATAGAACACATGGTTGGACTTGAGCCTCGGATAGAAAAAGTTATTTCACTTCTTAATAAATCTGACAAAGGCGTTTGTATGTTGGGGATTCATGGAACTGGTGGAATTGGCAAAACAACCCTTGCAAAAGCTATCTATAATTCAATCTTCTACCAATTTGAAGGTGCATGTTTCTTGTTTGATGTCAATGAAGCATCAAAGAAATTCCAGGGCATTGTTCATCTTCAACAAAAACTTCTATCTGAGATTCTTGAGGAAAAGATCATGAGCTTTGGTAGTGCTGACCAAGGAATATCTATAATAAAGCACAGACTCTCTCATAAAAGAGTTTTATTGGTTCTTGATGATGTTGATGAGATTGAACAGTTAGAACGACTTGCAGGGGGGTGTGATTGGTTTGGTTGTGGAAGCAAGGTCATTATAACAACAAGAAATAAGCAATTGCTAATTGCTCATAATGTTAAAAGAACATATGAATTGATGGAGCTAAATGATCATGACTCTCTTGAACTCTTTTGTTGGCATGCCTTTCATATGACCCTACCTCCAAAAGGCTATCAACAAATGTCTAGTCATGTGATAAGTTATGCAAAGGGCATCCCTCTGGCTTTAAAATTAATCGGTGCCAATTTAGCAAATAAAAACTTAAAGGAATGGAGGTCTACATTGGAACAGTATGATCAGATTCCAGAAAGAACAATGCATGAAGTATTAAAGATAAGCTATGATTGCTTACAAGAAGGTGCTAAGATTATTTTCTTGGATATTGCTTGTTTCTTTGAAGAGGAGCTACTGGGTTCTATTGATGAAATAGCTGAAGCTTGTGATTATGGTGCAAGGTTTTATATTGAAGTGCTTATCGATAAATCGCTTTTATCAATTAATGATAATGATCATTTATGCATGCATGATATGATAAAACAAATGGGTAGAGAGATTGTTAGGAAGGAGGCACCATCAAATCCTGGCAAACGTAGCAGATTATGGAATTATAAAGATGTTTGTAAAGTACTACATGAAAATTCAGGAAGTAGTAATATTGAAGGAATAATTTTTGATCCGCCTCAACAAGAAGAAGTGGAGTGGAGTGGTAAAGCCTTTAAGAAGATGAATAATCTTAGAATTCTTATCATTCGAAAGGCCCAATTTTCAGCTGGCCCTAAATATCTTCCCAATAATTTGAGATGGCTTGAATGGCAAGGATATCCTTCTACAGAATTGCCTCCAAATTTTTCTCCAAACAAGCTGGTTGTCTTCAAGTTATGTTGCAGTCCTTTTAGGTTGGAAGAGCCATTCAAGAGATTTGAATATTTGACATGTATGAATTTCTCACATTGTGAATTCATAACTGAAGTACCTGATATGTCTCAATTCCAAAGTTTAAGGAAATTGTTGTTTAGAGACTGTTACAATTTGGTCAAAGTTCATGATTCAGTGGGATCACTCTCTAAGCTGGTTGAATTAGATGTTGGTGGATGCGTCAGACTTACAACCTTTCCACATGAAATCAATATGCCATCTCTTGAAGGTATTGATTTCAGTCATTGCAAGAGTTTGGACTACTTCCCACATATAGTGGGAAAGATGGATGCATTAACGGATGTTTGGGTTGAAGACACTTCTATTAAGGAGCTCCCACCTTCCATTGGAAATCTTTCTGGACTTGAATCTTTAAATTTAAGCTCTTGCAAAAGTCTTAAAGAGCTTCCAAACAGCTTATTCCTGATGCAAAATCTTAACTGGCTTGGTTTGGAAGGCATTCAACCTGATAGCAGAAAATCTTTGAAGAAATTATTGCTAGAGAGCCAACCAGTCAGCTACACAAATGTAGAGTTCTTGATTCTCAAAAATTGTTGTCTATTGGATGAAGATATTCACCTGACTCTGAATCTTTTCCAGAATTTGATAGAGTTAAATGTATCAGGGAATGATTTTGTGTCCCTTCCTAATTGCCTTAAAGAGTGTGGCAGGTTACTGGATTTGGATGTGAGTAACTGCAAGAGGCTGAGAGATATACTAGAATTACCATCAAATTTGCGGAAAATAAGGGCAGAGAATTGCATTTCATTAACTACAGAGTCATTAGGCCATTTATGGTCTCAGGCAAAAAGGGAGTTCTATGGCATGAGTATCACTTTGCCTGCAACCACATTTCTTGATTGGTTCCACAATTGGCGTGAAGGAGGGAAAATGTCTTTCCTTGCTCGTAGGATTTTCCCTCACTTGGTCTTTGCTTTTGAGTTGGGGAAAGCCAACACAAGTAGGAGACAATCCTTCCATTATTCTCTGAGCATCAATGGTCGTGTAGTACAAAAGAAACATGATGATATCACAATTAGACCAGGTCATGTATCTTTATTTAATCTAGGAGTGGCTTTTGAGGGAGAAGACTGGAGGTGGGTTCAAAGATTCATGGAATTGGATTGGAATGATGTGGAGATGCAAGTCATTGGCTTAACGCCAGAAATAGCTGTGGTTAAGTGTGGAGTTTATGTGTGCAACCAACAAATAAACATGGAGAATATCAGATTCAAGTCTCCTATTATGCTTTCCATGAATGCTCCAACAACTTCACTGAAACGAAGAGCCATAGCTTCTCCTCCTAATGAACCACCCAAGAAGGTCCTGAGAAAGTTTGAGGTTGCTGATAAAGGAAAGATCAATAACAAAAAGAAAGTTTCAAGGTGCGCCTTTGCCTGGTGA 3348 0.3838 MAVQVASSSSAGFTSKTKYRYDVFLSFRGEDTRKCFTVNLYDVLRKKGINAFIDDKKLGKGEKIATSLLKAIEKSRISIIVFSKNYANSTWCLDELAHIIQCKKEKNQVVMPLFYKVDPMDVQYQKNSFEEAMVALEERFRNEVEKDRNSFEEHRAAYEDRVRKNMEKLQKWRSALFEAASLSSAWFFQDGCEFRFIERIVEHVYAMLPPKPYHNIEHMVGLEPRIEKVISLLNKSDKGVCMLGIHGTGGIGKTTLAKAIYNSIFYQFEGACFLFDVNEASKKFQGIVHLQQKLLSEILEEKIMSFGSADQGISIIKHRLSHKRVLLVLDDVDEIEQLERLAGGCDWFGCGSKVIITTRNKQLLIAHNVKRTYELMELNDHDSLELFCWHAFHMTLPPKGYQQMSSHVISYAKGIPLALKLIGANLANKNLKEWRSTLEQYDQIPERTMHEVLKISYDCLQEGAKIIFLDIACFFEEELLGSIDEIAEACDYGARFYIEVLIDKSLLSINDNDHLCMHDMIKQMGREIVRKEAPSNPGKRSRLWNYKDVCKVLHENSGSSNIEGIIFDPPQQEEVEWSGKAFKKMNNLRILIIRKAQFSAGPKYLPNNLRWLEWQGYPSTELPPNFSPNKLVVFKLCCSPFRLEEPFKRFEYLTCMNFSHCEFITEVPDMSQFQSLRKLLFRDCYNLVKVHDSVGSLSKLVELDVGGCVRLTTFPHEINMPSLEGIDFSHCKSLDYFPHIVGKMDALTDVWVEDTSIKELPPSIGNLSGLESLNLSSCKSLKELPNSLFLMQNLNWLGLEGIQPDSRKSLKKLLLESQPVSYTNVEFLILKNCCLLDEDIHLTLNLFQNLIELNVSGNDFVSLPNCLKECGRLLDLDVSNCKRLRDILELPSNLRKIRAENCISLTTESLGHLWSQAKREFYGMSITLPATTFLDWFHNWREGGKMSFLARRIFPHLVFAFELGKANTSRRQSFHYSLSINGRVVQKKHDDITIRPGHVSLFNLGVAFEGEDWRWVQRFMELDWNDVEMQVIGLTPEIAVVKCGVYVCNQQINMENIRFKSPIMLSMNAPTTSLKRRAIASPPNEPPKKVLRKFEVADKGKINNKKKVSRCAFAW 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01163 1115 Pfam TIR domain 21 176 IPR000157 GO:0007165
Accr11g01163 1115 Gene3D Ribonuclease Inhibitor 748 921 IPR032675 -
Accr11g01163 1115 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 822 IPR044974 GO:0006952
Accr11g01163 1115 SMART till_3 20 182 IPR000157 GO:0007165
Accr11g01163 1115 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 138 IPR035897 -
Accr11g01163 1115 Gene3D - 209 373 IPR027417 -
Accr11g01163 1115 Gene3D - 15 208 IPR035897 -
Accr11g01163 1115 PRINTS Disease resistance protein signature 242 257 - -
Accr11g01163 1115 PRINTS Disease resistance protein signature 319 333 - -
Accr11g01163 1115 PRINTS Disease resistance protein signature 412 426 - -
Accr11g01163 1115 PRINTS Disease resistance protein signature 765 781 - -
Accr11g01163 1115 SUPERFAMILY L domain-like 567 912 - -
Accr11g01163 1115 Pfam NB-ARC domain 225 445 IPR002182 GO:0043531
Accr11g01163 1115 Gene3D Ribonuclease Inhibitor 573 747 IPR032675 -
Accr11g01163 1115 SUPERFAMILY "Winged helix" DNA-binding domain 450 553 IPR036390 -
Accr11g01163 1115 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 209 - -
Accr11g01163 1115 ProSiteProfiles TIR domain profile. 19 208 IPR000157 GO:0007165
Accr11g01163 1115 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 471 IPR027417 -
Accr11g01163 1115 Gene3D - 377 461 IPR042197 -
Accr11g01163 1115 Coils Coil 126 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01163 Accr-Chr11 26238432 26242915 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01163 21 813 WRKY Transcription Factor Family AT4G12020 29.412 2.06e-88 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01163 - - pcin:129286217 1325.07