Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01162 ATGGCGATTCAAGTGGCAGCATCATCATCATGCCATAGCTTTTCAACAAAGTACAAATATGATGTTTTCCTGAGTTTTAGAGGCGAAGATACTCGCCACATCTTCACTGTTCCTCTCTATGATGCCTTGCAACATAAGCAAATCAAGGCCTTCATTGATGACAAGAAGCTTGGCAAAGGTGAACGCATTGCACCTGCACTTCTTAAAGCCATAGAGAAATCAAGGATTTCCATTATTGTTTTTTCTAGGAACTACGCTACTTCCACATGGTGTCTGGATGAACTCGCCCACATAATTCGGTGTAAGGAGCAGAAGAACCAGGTGGTTATGCCAATATTTTACAAGGTGAATCCGATGGATGTACAATATCAAGCAAATAGCTTTGGCGAAGCCATGGCTGCTCATGAAGTTAGGTTCAGAGATAACGTGGAGAAAGTGCAAAAATGGAGATATGCTTTGTCCGAAGCTGCTAGGTTGCCGCAAGCATGGCTTTTTGAAGATGGATGCCAATCTGGGTTTATTGAAGGGATTGCTAAAGATGTTTACGCTATGCTTCCTCCCAAACCTTTCCATAACATAGGTCACATGGTCGGACTTGAGCCTCGTATAGAAGAAGTGATGTCACTTCTTGATGATTCTGATGAGGGCGCTTGTATGTTGGGGATTCACGGACTCGGTGGAATTGGTAAAACAACCCTTGCGAAAGCCATCTATAATTCAATCTTCTACCAATTCGATGGCTCATGTTTTTTGTCTGATGTTAGTAAAGAATCAAAGAAATTCCGTGGCACAGTTTGTCTTCAACAGACTCTTCTATCAGAGATTCTTGATGAGAAGAAGATGAAGTTTGGCAGTGTTCATGAAGGAATATCAAAAATAAAACACAGGCTCTCACGCAAAAAAGTTCTATTGGTTCTTGATGATGTTGATGAGCTTAAACAGATAGAAGAACTTGCAGGGAGATGTGACTGGTTTGGTTGTGGGAGCAGGGTCATTATAACAACAAAATACAAGCAATTGTTGCTTGCACATAATGTTGAAAAAACATATGAAATGAAGGTGCTAAATGATCATGACTCCCTTGAGCTCTTTTGCTGGCATGCGTTCCATACGATCAATACTCCAAAAGGCTATCAAGATATGTCTACACATGTGATAAGTTATGCCCAGGGCCTTCCTCTGGCTTTAAGAGTAATAGGCTCCAATTTGGCAAATAAAAATTTAGAGGAATGGAGGCCTATATTGGGAAAATATGATCGAATCCCTGAAAGTTCAATTCATGAGGTGCTAAAGATAAGCTATGATTGCCTGCAAGATGGTGCTAAGAGCATTTTTCTTGATATTGCTTGTTTCTTTACAGAAGAGAAACTAGAATCTGTTGAAGAAAGACTAGAAGCTTGTCATTCTGGTGCAAGGTTTTATATTGAAGTTATTGTTGAAAAGTCTCTAGTAGATGTTGATAGGGATGGTTGCTTATGGATGCATGATGTAATAGAAATTATGGGTAAAGAGATTGTTCGGCGGGAGGACCCATCAAATCCTGGTGAACGCAGTAGAATATGGGATTACAAGGATATTCTTACTATGCTACATGAAGATTCAGGAAGCGATAAGATTGAAGGAATAATGTTTGATCCACCACAACAAGAACAAGTGGAGTGGAGTGGTATGTCACTTAAGAAGATGAATAATCTGAGGATACTTGTGGTTCGGAATGCTCAGTTTTTAACTCGCCCTAAATATCTTCCCAATAATTTAAGATGGCTTGAGTGGAAGGAATATCCCTGCACAACCTTACCATCAGATTTTTCTCCTGGAAAATTAGTTTTCTTGAGGTTACAGATTGTCTTTTCAAACTGGAAGAGCCATTAG 1872 0.3985 MAIQVAASSSCHSFSTKYKYDVFLSFRGEDTRHIFTVPLYDALQHKQIKAFIDDKKLGKGERIAPALLKAIEKSRISIIVFSRNYATSTWCLDELAHIIRCKEQKNQVVMPIFYKVNPMDVQYQANSFGEAMAAHEVRFRDNVEKVQKWRYALSEAARLPQAWLFEDGCQSGFIEGIAKDVYAMLPPKPFHNIGHMVGLEPRIEEVMSLLDDSDEGACMLGIHGLGGIGKTTLAKAIYNSIFYQFDGSCFLSDVSKESKKFRGTVCLQQTLLSEILDEKKMKFGSVHEGISKIKHRLSRKKVLLVLDDVDELKQIEELAGRCDWFGCGSRVIITTKYKQLLLAHNVEKTYEMKVLNDHDSLELFCWHAFHTINTPKGYQDMSTHVISYAQGLPLALRVIGSNLANKNLEEWRPILGKYDRIPESSIHEVLKISYDCLQDGAKSIFLDIACFFTEEKLESVEERLEACHSGARFYIEVIVEKSLVDVDRDGCLWMHDVIEIMGKEIVRREDPSNPGERSRIWDYKDILTMLHEDSGSDKIEGIMFDPPQQEQVEWSGMSLKKMNNLRILVVRNAQFLTRPKYLPNNLRWLEWKEYPCTTLPSDFSPGKLVFLRLQIVFSNWKSH 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01162 623 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 159 IPR035897 -
Accr11g01162 623 Pfam NB-ARC domain 202 418 IPR002182 GO:0043531
Accr11g01162 623 ProSiteProfiles TIR domain profile. 18 185 IPR000157 GO:0007165
Accr11g01162 623 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 614 IPR044974 GO:0006952
Accr11g01162 623 Gene3D - 354 438 IPR042197 -
Accr11g01162 623 PRINTS Disease resistance protein signature 219 234 - -
Accr11g01162 623 PRINTS Disease resistance protein signature 560 576 - -
Accr11g01162 623 PRINTS Disease resistance protein signature 389 403 - -
Accr11g01162 623 PRINTS Disease resistance protein signature 296 310 - -
Accr11g01162 623 Pfam TIR domain 19 182 IPR000157 GO:0007165
Accr11g01162 623 Gene3D - 188 350 IPR027417 -
Accr11g01162 623 Gene3D - 13 187 IPR035897 -
Accr11g01162 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 448 IPR027417 -
Accr11g01162 623 SUPERFAMILY "Winged helix" DNA-binding domain 425 530 IPR036390 -
Accr11g01162 623 SMART till_3 19 159 IPR000157 GO:0007165
Accr11g01162 623 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01162 Accr-Chr11 26200923 26203474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01162 14 613 WRKY Transcription Factor Family AT4G12020 28.571 1.45e-68 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01162 - - pcin:129286217 872.848