Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01156 ATGGCGATTCAAGTAGCTGAAACATCATCCTTTGGCTTTAGTCGCAAAAGCAAGTATAGATATGATGTCTTCTTGAGTTTCAGAGGTGAAGATACTCGCAAATCGTTCACTGTGCATCTCTACGATGCTTTGCGCAAGAAAGGAATCAACGCCTTCATTGACGACAAGAAACTCGGTAAAGGGGAACAAATTGCGCCTACGCTTCTTAAAGCCATTGAGAGATCAAGGATTTCCATTGTTGTGTTCTCTGCAAACTACGCTACTTCCACTTGGTGCCTTGATGAACTGGCTCACATCATTCGGTGTAAGAAAGTGAAGAACCAGCTGGTTATGCCCATCTTTTACAAGGTGGATCCAATCGATGTTCAATATCAAAGAAACAGCTTTGGAGAAGCAATGGCTGCTCATGAAGCTGGTAGATTCAGTAATAACCTGGAGAAAGTGCAAAAATGGAGGTCCACTTTGTTTGAAGCTGCTAGTTTGCCATCAGCATGGCTTTATGAAGATGGATGTGAATTTGGATTTATTGACAGGATAGTGGAACATGCATATTCTATGCTACCAACTAAACGCTTCCATAACATTGGTTATATGGTTGGACTTGAGCCTCGCATAGAGGAGGTGATGTCACTTATAGATAAATCTGATGACCACGTGTGTATGTTGGGAATTTACGGAACTGGTGGAGTAGGTAAAACAACCCTTGCAAAAGCTTTGTATAATTCAATTTTCTACCTATTTGATGGTGCAAGTTTTTTGTTTGATGTTCGAGAAGAATCAAATAAATATCAAGGTATTGTGCATCTTCAACAAACACTTTTATCAGAGATTGTTGAGGAAAATAGGATGACATTTGGTAGTGTTGATGAAGGAATATCAAAAATAAAACACAGACTCTCTCACAAAAAGGTTTTGTTGGTTCTCGATGATGTTGATGAGGTTGAACAGTTAGAACAACTCGCCGGCGGCTATGATTGGTTTGGTTGTGGAAGCAAGGTTATTATAACAACTAGAAATAAACAATTGCTAATTGCACACAATGTTGAAAAAACATATGAAATGAAGGAGCTAAATAAGCTTTACTCTCTTGAACTCTTTTGTTGGCATGCCTTTGGTATGAGAAATCCTCCAGATGACTTTAAAATTATGTCCAATCATGTTTTAAGATATGTACATGGCCTTCCTCTTGCTTTAAAAGTAGTAGGCTCCAACTTGGCAAATAAAGACATAGAGGAATGGAGATCTACATTGGAAAAGTATAAAAGAATCCTTCAAAGAACAATCCATGAGGTACTCAGGATAAGCTATGACTGTTTACAAGATGGCGCTAAGCGTGTTTTCCTAGATATTGCTTGTTTCTTTAAAAAGAAGACATTGAAATTCATTGAAGACATATTAGAAGCTTGTGACGATGGGGCAAGGTTTTATATCGAAATTCTTGTTGATAAATCTTTGATAACTATTGATGAAACTAGCAGTTGCTTGTACATGCATGATCTAATACAACAAATGGGAAAAGAGATTGTTAGGCAAGAGGCACCCTCAAATCTTGGGCAACGCAGTAGATTATGGTATTATAAAGATGTTTTCAAAGTCCTACATGAAAATTTAGGAAGCAATAGTATTGAAGGAATTATACTTGATCCCCCTCATCAAGAAGAAGTGGAGTGGAGTGGTACAGCTTTTGAGAAAATGAATAATCTCAAGATTCTCATCATTCGAAATGCCCAATTCTTAACAAGTCCTAAATATTTTCCAAGTAGTTTAAGGTTACTTGACTGGAAAGGGTATCCTTCAACCACTTTACCAACAGAATTTTCTCCTTCAAAACTAATTTTCTTGAAGTTACCTCAAAGCCCCTTCAGATTAGAAGAACCATTCAAGAAGTTTGAATACATGACATATTTGAATTTCTCAAAGTGTGCATTCATTACTGAAGTACCAGACATGTCTGAATTAAAAAATTTAAAAGCACTGATCTTCAGGACATGCCACAATCTGACCAAAGTTCATGATTCCGTGGGATCTCTCTCTAAACTTGAAAGATTAGATTTTAGTGAATGCTCAAGACTTACAAGATTTCCCCATAAAATCAACATGGCATCTCTTCAAGAGCTTGACCTTGGTTTTTGCAAGAGCCTTGACTACTTCCCAGATATAGTAGGAAAGATGGAAAATCTATTTAATGTTACAGCAACAATGACTGCAATTAAAGAGCTTCCACCTTCCATCGGGAATCTTCCAGAACTTTCTCGTTTAGATTTATCCTCTTGTAGAAGTCTTAGGGAGCTCCCAAATAGCTTATTGACATCACCAAATCTTACAGATCTTCAGTTAGCAGATATTCACCCTCTTGGGAGAGAATCTTTTAAGAAAGTGATGCAACAGAACCAACAAGTTTCTAGCCATGAAGACATAGAAGTCTTGAATCTCAAGAATGTCAGCCTATTGGATGAAGATCTTCACCTAACTCTCAAATGGTTTAGGAACGTAGAATTCTTAAACTTATCGAGGAATGATTTTGTGTCACTTCCTGAGTGCATTAAAGAGTGTCCTTATTTGGAGTACCTGCATGTGGATGACTGTAAGAGGTTAAGAGACATACCAGAGTTGCCATCAACTTTGCAAAACATAGACGCAAGTTATTGCACGTCATTAACTCCCGAATCTATAGGCCATTTATGGACTCAGGCAAAGGAGGGCTTTCGGGTGGCAATCGATATGCCAGCAACAACATTTCCTGATTGGTTAGACTCTTGCTGTAAAGGAGGGAAATTGTCTTTCCGTGTTCGTGGAGATTTCCCTCCTGTCCTTGTGGCATTCGAGACGGGGAAAGCGAACACAAACATGATATACTTTTATGAAATTTATATGAGCTTCAATGGTCGTAATAAAATGCCATGGACGATACTTAGTGATCGTCAAGCAAGGGCAAATGGTCGTGTTTACTTTTCTGTAGCTTCTGAAGGTCATTTGTATTTCTTTGATGTAATAAGGGATTTTGAGGAAGAAGAGTTGCAGGGGCTTAATAAGTTTCTGGGATTGGATTGGAATGATGTGGACATACAAGTTAGGTGTGACCCACCAGACATGTCCATAGTTAAATGTGGTGTTTATTTTGATAAGGAGCAAACAAATATGGAGAATGTTCAGTTCAACTCTTCATATCTACATTCCGTGAAAGCTTCAAGAACTTCACTGAAACGAAAAACGGTAGCTTCTCATCCTACCGAACCACCCCATAAGAAGCACCTGAAAAGGTTCAAAGAAAAAATCTATTACACAAAAAAGCGGACTAGGAAAACTAAACCACATCAAATTGTTCATTCACCGCACAAGAGAAAGATGTCTTTCCCTATGTCGAAGCATCTTTGGAGAGCTTTGTATTCTTAG 3393 0.3811 MAIQVAETSSFGFSRKSKYRYDVFLSFRGEDTRKSFTVHLYDALRKKGINAFIDDKKLGKGEQIAPTLLKAIERSRISIVVFSANYATSTWCLDELAHIIRCKKVKNQLVMPIFYKVDPIDVQYQRNSFGEAMAAHEAGRFSNNLEKVQKWRSTLFEAASLPSAWLYEDGCEFGFIDRIVEHAYSMLPTKRFHNIGYMVGLEPRIEEVMSLIDKSDDHVCMLGIYGTGGVGKTTLAKALYNSIFYLFDGASFLFDVREESNKYQGIVHLQQTLLSEIVEENRMTFGSVDEGISKIKHRLSHKKVLLVLDDVDEVEQLEQLAGGYDWFGCGSKVIITTRNKQLLIAHNVEKTYEMKELNKLYSLELFCWHAFGMRNPPDDFKIMSNHVLRYVHGLPLALKVVGSNLANKDIEEWRSTLEKYKRILQRTIHEVLRISYDCLQDGAKRVFLDIACFFKKKTLKFIEDILEACDDGARFYIEILVDKSLITIDETSSCLYMHDLIQQMGKEIVRQEAPSNLGQRSRLWYYKDVFKVLHENLGSNSIEGIILDPPHQEEVEWSGTAFEKMNNLKILIIRNAQFLTSPKYFPSSLRLLDWKGYPSTTLPTEFSPSKLIFLKLPQSPFRLEEPFKKFEYMTYLNFSKCAFITEVPDMSELKNLKALIFRTCHNLTKVHDSVGSLSKLERLDFSECSRLTRFPHKINMASLQELDLGFCKSLDYFPDIVGKMENLFNVTATMTAIKELPPSIGNLPELSRLDLSSCRSLRELPNSLLTSPNLTDLQLADIHPLGRESFKKVMQQNQQVSSHEDIEVLNLKNVSLLDEDLHLTLKWFRNVEFLNLSRNDFVSLPECIKECPYLEYLHVDDCKRLRDIPELPSTLQNIDASYCTSLTPESIGHLWTQAKEGFRVAIDMPATTFPDWLDSCCKGGKLSFRVRGDFPPVLVAFETGKANTNMIYFYEIYMSFNGRNKMPWTILSDRQARANGRVYFSVASEGHLYFFDVIRDFEEEELQGLNKFLGLDWNDVDIQVRCDPPDMSIVKCGVYFDKEQTNMENVQFNSSYLHSVKASRTSLKRKTVASHPTEPPHKKHLKRFKEKIYYTKKRTRKTKPHQIVHSPHKRKMSFPMSKHLWRALYS 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01156 1130 Gene3D Ribonuclease Inhibitor 530 727 IPR032675 -
Accr11g01156 1130 Pfam NB-ARC domain 204 423 IPR002182 GO:0043531
Accr11g01156 1130 Gene3D - 190 352 IPR027417 -
Accr11g01156 1130 SUPERFAMILY L domain-like 510 889 - -
Accr11g01156 1130 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 772 IPR044974 GO:0006952
Accr11g01156 1130 SMART till_3 20 161 IPR000157 GO:0007165
Accr11g01156 1130 SUPERFAMILY "Winged helix" DNA-binding domain 427 533 IPR036390 -
Accr11g01156 1130 Gene3D - 356 440 IPR042197 -
Accr11g01156 1130 Coils Coil 410 430 - -
Accr11g01156 1130 Pfam TIR domain 21 165 IPR000157 GO:0007165
Accr11g01156 1130 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 160 IPR035897 -
Accr11g01156 1130 Gene3D Ribonuclease Inhibitor 728 900 IPR032675 -
Accr11g01156 1130 Gene3D - 14 189 IPR035897 -
Accr11g01156 1130 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 450 IPR027417 -
Accr11g01156 1130 PRINTS Disease resistance protein signature 745 761 - -
Accr11g01156 1130 PRINTS Disease resistance protein signature 221 236 - -
Accr11g01156 1130 PRINTS Disease resistance protein signature 391 405 - -
Accr11g01156 1130 PRINTS Disease resistance protein signature 298 312 - -
Accr11g01156 1130 ProSiteProfiles TIR domain profile. 19 187 IPR000157 GO:0007165
Accr11g01156 1130 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01156 Accr-Chr11 25447437 25453538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01156 21 864 WRKY Transcription Factor Family AT4G12020 28.704 2.21e-86 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01156 - - pcin:129285870 1422.53