Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01151 ATGATCATTCCAAATCAAGAGCCATCGTCTTCTGGATCGTCCTCCATCAAATCGATTCCCAATCACTACGATGTTTTCCTAAATTTCATAACCGAGACGACATTCACTACCACTCTCTGTGATTCTTTGCGCGAAAAAGGAATCGACAAAATCTTCGTCGATCCCAAGAAAAAGGAAAGGAAACAAGTTCTTGCATCACCCGATCCTCTTACAGTAATTAAAGAATCAAAGGTTTCTATTCTTGTGTTCTCTGAAGATTATGCTTCTTCCGCTGATTGCCTTGATGAGCTCGTTGAGATTATGGAGTCCCAGAAGAAAACGACGACGCAAGTGGTTTTCCCGATCTTCTACCAAATAGAACCAACGATTGTTCGGCATCAGAAAAGTAAGTATGGAGAAGCCATGGAAGCTCATCAACGGCGCTTCGGAGATGAACGGGTTCAGAAATGGAAGTTGGCTTTGAAAGAAGCCGCCGATTTGTCCGGATGGCATTCTAAACCAGGATCTGAAAATAACGTTGTTGAGGAGATTGTTGAAGCGACCTTTTCCAAGTTGCCGCCTAAACGATTACATGTTGGGGAGCACATAGTTGGACTCGGCCCTCGCATAAAAGATGTGACTTCACTTCTTGATACTGTGCCTATTTTAGTAATTCATGGAACTGCAGGAGTTGGCAAAACGACACTTGCAAAAGCTGCATACAATTCAATTGTCCACCGATTTCAAGAGGCTTTTTTTCTTTCTAACATCAAAGAAGGCATGGTACGTCTTCAAAAGGCAAGAGTTCTTCTTCTTCTTGATGACATGGATAAGATGGAAGAATTGGAACAACTTAAGGGAGGTCGTGAGTGGTTTGGAAAAGGCAGCAAAGTCATTGTAACAACAAGAAATAAGCCATCACTGATTTATGGTCATATTCATAAATATGAAATGGAGGGGTTAAATGACAATGACTCTCTTGAGCTTTTCTATCGATATGCCTTTCCCTCTGATAAACCTACGGTGGAGTATGAAGAAATGTCCAAACGTATGGTGAGTTATGCACAAGGCCTCCCTTTTGTTTTGAAAACGATGGGCTCCAAATTAAAGTACAAAAGTGTCGCTGCATGGAAATGTGCATTGGATGAATTGGAGAGACTTCCAGAAAAGAAGGTTGAAGGTGTTCTCAAAATAATGGGATCGTAG 1185 0.4152 MIIPNQEPSSSGSSSIKSIPNHYDVFLNFITETTFTTTLCDSLREKGIDKIFVDPKKKERKQVLASPDPLTVIKESKVSILVFSEDYASSADCLDELVEIMESQKKTTTQVVFPIFYQIEPTIVRHQKSKYGEAMEAHQRRFGDERVQKWKLALKEAADLSGWHSKPGSENNVVEEIVEATFSKLPPKRLHVGEHIVGLGPRIKDVTSLLDTVPILVIHGTAGVGKTTLAKAAYNSIVHRFQEAFFLSNIKEGMVRLQKARVLLLLDDMDKMEELEQLKGGREWFGKGSKVIVTTRNKPSLIYGHIHKYEMEGLNDNDSLELFYRYAFPSDKPTVEYEEMSKRMVSYAQGLPFVLKTMGSKLKYKSVAAWKCALDELERLPEKKVEGVLKIMGS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01151 394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 391 IPR027417 -
Accr11g01151 394 SMART till_3 22 160 IPR000157 GO:0007165
Accr11g01151 394 Gene3D - 313 392 IPR042197 -
Accr11g01151 394 Gene3D - 20 186 IPR035897 -
Accr11g01151 394 Gene3D - 187 253 IPR027417 -
Accr11g01151 394 Gene3D - 254 303 IPR027417 -
Accr11g01151 394 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 383 IPR044974 GO:0006952
Accr11g01151 394 Pfam NB-ARC domain 257 381 IPR002182 GO:0043531
Accr11g01151 394 ProSiteProfiles TIR domain profile. 21 185 IPR000157 GO:0007165
Accr11g01151 394 PRINTS Disease resistance protein signature 348 362 - -
Accr11g01151 394 PRINTS Disease resistance protein signature 215 230 - -
Accr11g01151 394 Pfam TIR domain 23 186 IPR000157 GO:0007165
Accr11g01151 394 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 163 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01151 Accr-Chr11 25302496 25304321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01151 23 360 WRKY Transcription Factor Family AT4G12020 25.131 1.64e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01151 - - pcin:129286951 506.523