Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Accr11g01149 | ATGGCAACTCAAATCGCAGCACAGTCATCGTTTGGCTTGTCCCGTGAAATCAAGTATAGATATGATGTTTTCTTGAGTTTCAGAGGTGAAGATACTCGTCACTCCTTTACTGTGCTTCTTTATGATGCCTTGCGATGTAAGGGAATCAAGGCCTTCATTGATGACAAGAAGCTTGGCAAAGGTGAACGGATTGCACCTGCACTTCTTAAAGCCATCGAGAAATCAAGGATTTCCATTATTGTGTTTTCTAGGAACTACGCTACTTCCACATGGTGTCTGGATGAACTCGCCCACATTATTCGGTGTAAGGAGCAGAAGAACCAGGTGGTTATGCCAATATTTTACAAGGTGAATCCGATGGATGTACAATATCAAACAAATAGCTTTGGCGAAGCCATGTCTGTTCATGAAGTTAGGTTCAGAGATAACAAGGAGAAATTGCAAAAATGGAGATTTGCTTTGTCTGAAGCTGCTAGGTTGTCACCAGCATGGCTTTTTGAAGATGGATACCAATCTGGGTTTATTGAAGGGATTGCTAAACATGTTTATGCTATGCTTCCCCCTAAACGCTTCCATAACATAGGTCACATGGTCGGACTTGAGACTCGTATAGAAGAAGTGATGTCACTTCTTGATGATTCTGATGATGGTGCTTGTATGTTGGGTATTCATGGACCTGGTGGAATTGGTAAAACAACCCTTGCGAAAGCCATCTATAATTCAATCTTCTACCAATTTGAAGGTTCATGTTTTTTGTTTGATGTTAGAGAAGAATCAAAGAAATTCCATGGCAATGTTTCTCTTCAACAGACTCTTCTATCAGAGATTCTTGAGGAAAAGAAGATGAAGTTTGGCAGTGTTCATGAAGGAATATCAAAAATGAAACACAGGCTCTCACACAAAAAAGTTCTATTGGTTCTTGATGATGTTGATGAGCTTGAACAGATCGAAGAACTTGCAGGGGGATGTGACTGGTTTGGTTGTGGAAGCAAGGTCATTATAACAACAAGAAACAAGCAATTGCTGCTTGCACATAATGTTGAAAACACATATGAAATGAAGGAGCTAAATGATCATGACTCTCTTGAGCTCTTTTGCTCGCATGCCTTCCATATGACCAAAACTCCAAAACGCTATCGAGATATGTCTACACATGTGATAAGTTATGCCCGGGGCATTCCTCTGGCTTTAAGAGTAATAGGCTCCAATTTGGCAAATAAAAATTTAGAGGAATGGGGGTCTATATTGGAAAAATATGATCGAATCCCTGAAAGTTCAATTCATGAGGTACTAAAGATAAGCTATGATTGCCTGCAAGATGGTGCTAAGAGCATTTTTCTTGATGTTGCTTGTTTCTTTACAAAAGAGATACTGGAGTCTGTTGAAGAAATACTAGAAGCTTGTCATTCTGGTGCAAGGTTTTATATTGAAGTTCTTGTCGATAAGTCTCTGTTAGCTGTTGATAGGGAAGGTCGCTTGTGGATGCATGATCTAATACAAAGTATGGGTAAAGAGATTGTTAGGCATGAGGCACCATCAAATCCTGGTAAACGCAGTAGAATATGGGATTACAAAGATATTCTTAGTGTGCTACATGAAGATTTAGGAAGCAATAAGATTGAAGGGATAATGTTTGATCCACCTCAACAAGAACAAGTGGAGTGGAGTGGTATGTCATTTAAGAAGATGGATAATCTTAGGATTCTTGTGGTTCGGAATGCTCAGTTTTCAACTGGCCCTAAATATTTTCCCAATAATTTGAGATGGCTTGAGTGGAACGGATATCCGTGCACAACTTTACCATCAGATTTTTCTCCTAGGAAATTAGTTTCCTTGAGGTTGCAGAATAGTCTTTACAATCTGGTAGAGCCATTCGAGATGTTTGAACATGTGACGTGTATGGATTTCTCCCACTGTGAATTAATAACTGAAGTGCCTAATATGTCTCAATGTCAAAGTTTAAGAAGATTGTCGTTGGAAGAGTGTAGCAATCTGATCAAAGTTGATGATTCGGTGGGATTTCTCTCAAATCTGGTTGTCTTAAATGTTAGAAGATGCACCAAACTTACTTGCTTTCCGCATAAAATCAACTTGCCATCTCTTCGAACGATTTATATCAGTGGTTGCATGAGCCTTCAATACTTCCCACGTATAGTTGGAAAGATGGATTCACTTACTGATATTTATGCAGAAGAGACTGCAATTAAAGAGCTCCCACCTTCCGTTTCCACTGGAAATCTTCCAAGCCTTCAAGGTTTATTTTTAAGATCCTGCAACAGTCTTGGGGAAATTCCATCCAACTTATTCGCGTTTCCAAATCTTTCGTATCTTGATTTGGGAGACACTCAGCCTCTAAGTGGAAAATCTTTCAGCCAATTAATGCTAGAGAACCAATCAGTTATTAGCTGCACAAACTTACACGTATTGGATCTTGATAATTGTGGTCTATTATTGGATGAAGATCTCCACTTGATTCTGAAAAGTTTTCTGAATTTGGAGAACCTTGATCTATCAGGGAGTGATATTGAGTCCCTTCCTGAGTGCATTAAAGACTGTGCTAATCTATTGACATTGATCGTGAGTGATTGCAAGAAGCTAAGAGACATACCAGAGTTGCCACCAGAGTTGAGTGTCATAAAAGCTGAGAATTGCAGATCATTAACTAAAGAGTCATTGGACAGATTGTGGTCTTATCAGGCAAACAGGTTCTCTAACTTGATGAGAATTAGTATGCCAGCAACAACAACTTTTCCTGACTGGTTTGACCATTGCTGTAAAGGAGGGACATTGTCTTTTCGTGTGCGTGAGAATCTCCCTGTTCTTGTTCTTGCAGTTGAGGTAGGGAAAGCTGACACGAGTAGAATACTCCACTTCAATGTTTCTATAAGCATCAATGGTTGTAAGATTGAAATGAGAAAAGGTCGTCGTCCTGAAGAAAGTACAGAAGGCCATGTGCTTGTGTTTGGTCTAGAAATTATCATAGATTTGGAAGAGTGGAATATGTTTGATAAATTTCTGGAATTGGGATGGAATGATGTGGAAATAGAATTTACAAGTCACGACCCACCAGATATGTCCATAGTTAATTGTGGACTTTATGTAAACAAATTGCTAACAAACATGGAGAATATCCAGTTCTAG | 3141 | 0.3916 | MATQIAAQSSFGLSREIKYRYDVFLSFRGEDTRHSFTVLLYDALRCKGIKAFIDDKKLGKGERIAPALLKAIEKSRISIIVFSRNYATSTWCLDELAHIIRCKEQKNQVVMPIFYKVNPMDVQYQTNSFGEAMSVHEVRFRDNKEKLQKWRFALSEAARLSPAWLFEDGYQSGFIEGIAKHVYAMLPPKRFHNIGHMVGLETRIEEVMSLLDDSDDGACMLGIHGPGGIGKTTLAKAIYNSIFYQFEGSCFLFDVREESKKFHGNVSLQQTLLSEILEEKKMKFGSVHEGISKMKHRLSHKKVLLVLDDVDELEQIEELAGGCDWFGCGSKVIITTRNKQLLLAHNVENTYEMKELNDHDSLELFCSHAFHMTKTPKRYRDMSTHVISYARGIPLALRVIGSNLANKNLEEWGSILEKYDRIPESSIHEVLKISYDCLQDGAKSIFLDVACFFTKEILESVEEILEACHSGARFYIEVLVDKSLLAVDREGRLWMHDLIQSMGKEIVRHEAPSNPGKRSRIWDYKDILSVLHEDLGSNKIEGIMFDPPQQEQVEWSGMSFKKMDNLRILVVRNAQFSTGPKYFPNNLRWLEWNGYPCTTLPSDFSPRKLVSLRLQNSLYNLVEPFEMFEHVTCMDFSHCELITEVPNMSQCQSLRRLSLEECSNLIKVDDSVGFLSNLVVLNVRRCTKLTCFPHKINLPSLRTIYISGCMSLQYFPRIVGKMDSLTDIYAEETAIKELPPSVSTGNLPSLQGLFLRSCNSLGEIPSNLFAFPNLSYLDLGDTQPLSGKSFSQLMLENQSVISCTNLHVLDLDNCGLLLDEDLHLILKSFLNLENLDLSGSDIESLPECIKDCANLLTLIVSDCKKLRDIPELPPELSVIKAENCRSLTKESLDRLWSYQANRFSNLMRISMPATTTFPDWFDHCCKGGTLSFRVRENLPVLVLAVEVGKADTSRILHFNVSISINGCKIEMRKGRRPEESTEGHVLVFGLEIIIDLEEWNMFDKFLELGWNDVEIEFTSHDPPDMSIVNCGLYVNKLLTNMENIQF | 1046 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr11g01149 | 1046 | Gene3D | - | 355 | 439 | IPR042197 | - | |
| Accr11g01149 | 1046 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 21 | 765 | IPR044974 | GO:0006952 | |
| Accr11g01149 | 1046 | SMART | till_3 | 20 | 160 | IPR000157 | GO:0007165 | |
| Accr11g01149 | 1046 | Pfam | NB-ARC domain | 201 | 421 | IPR002182 | GO:0043531 | |
| Accr11g01149 | 1046 | Pfam | TIR domain | 21 | 184 | IPR000157 | GO:0007165 | |
| Accr11g01149 | 1046 | Gene3D | Ribonuclease Inhibitor | 724 | 914 | IPR032675 | - | |
| Accr11g01149 | 1046 | SUPERFAMILY | "Winged helix" DNA-binding domain | 426 | 531 | IPR036390 | - | |
| Accr11g01149 | 1046 | Gene3D | Ribonuclease Inhibitor | 528 | 723 | IPR032675 | - | |
| Accr11g01149 | 1046 | ProSiteProfiles | TIR domain profile. | 19 | 186 | IPR000157 | GO:0007165 | |
| Accr11g01149 | 1046 | PRINTS | Disease resistance protein signature | 220 | 235 | - | - | |
| Accr11g01149 | 1046 | PRINTS | Disease resistance protein signature | 801 | 817 | - | - | |
| Accr11g01149 | 1046 | PRINTS | Disease resistance protein signature | 297 | 311 | - | - | |
| Accr11g01149 | 1046 | PRINTS | Disease resistance protein signature | 390 | 404 | - | - | |
| Accr11g01149 | 1046 | SUPERFAMILY | L domain-like | 543 | 921 | - | - | |
| Accr11g01149 | 1046 | Gene3D | - | 18 | 186 | IPR035897 | - | |
| Accr11g01149 | 1046 | Gene3D | - | 187 | 351 | IPR027417 | - | |
| Accr11g01149 | 1046 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 190 | 448 | IPR027417 | - | |
| Accr11g01149 | 1046 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 17 | 187 | - | - | |
| Accr11g01149 | 1046 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 17 | 160 | IPR035897 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Accr11g01149 | Accr-Chr11 | 25279540 | 25285114 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Accr11g01149 | 21 | 779 | WRKY Transcription Factor Family | AT4G12020 | 29.344 | 2.95e-88 | 310 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Accr11g01149 | - | - | pcin:129285870 | 1272.69 |