Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01148 ATGATCATTCCAAATCAAGAGCCATCATCTTCTGGATCGTCCTCCAGCGAATCGACTTCCAATCACTACGATGTTTTCCTGAATTTCACAACCGAGACGACATTTACCATCACTCTCTGTGATTCTTTGCGTAAAAAAGGAATCGACAAAATCTTCGTCGTCCCCAAGAAATTGAGGAAGAAGAAAAGGAAACGAGTTCTTGCATCGCCCGATCCTCCTACAGCAATTAAAGAAGCAACGGTTTATATTCTTGTGTTCTCTGAAGATTATGCTTCTTCCGCTCATTGCCTTGATGAGCTCGTTGAGATCATGGAGTCCAAGAAGAAAAAGAAGAAGCAAGTGGTTTTCCCGATCTTCTACCAAATAGAACCAACGGTTGTTCGGCGTCAGAAAAGCAAGTATGGAGAAGCCATGGATGCTCATCAACGGCGCTTCGGAGACGAACGGGTTCTTAAATGGAAGAAGGCTTTGAATGAAGCCGCCGGTTTGTCCGGATGGCATTTTGAACCAGGATCTGAAAATGATGTTGTTGAGAAGATTGTTGAAGTGGCCTTTTCTAAGTTGCCACCTAAAGGATTACATATTGGGGAACACATAGTTGGACTTGGCTCTCGCATAAAAGATGTGACTTCACTTCTTAATGCTGTGCCTATTTTAGGAATTCATGGAACTGCAGGAGTTGGCAAAACAACACTTGCAAAAGCTGCATACAATTCAATTGTCCACCAATTTCAAGAGGCTTGTTTTCTTTCTGACATCAGAGAAGCTCCAAAAGAATGTGAAGGCATGGTACGTCTTCAAAAGACAATTTTATCGGAGATTCTTGATGAGAAGAAAAAGATCAAGTTTAGTAGTGTAAACAAAGGAATCTCTAAGATAAACCGGAGGTTATGCAAAAAAAGAGTTCTTCTTGTTCTGGATGACGTGGATAAGAAGGAAGAATTGGAACAACTTATGGGAGGTCGTGGGTGGTTTGGAAAAGGCAGCAAAGTCATTGTGACAACAAGAAATAAGCAATTACTGATTGATGGTCATATTCATGAATATGAAATGACGAAGCTAAATGACAATGACTCTCTCGAGCTTTTCTGTCAATATGCCTTTCCCTCTGACAAACCTACAGTGGAGTATGAAGACATGTCCAAACGTATGGTGAATTATGCACAAGGCCTTCCTTCGGCTTTGAAAACGATGGGCTCCAAATTAAATCATAAAAGCATGGATGCATGGAAATGTGCATTGGATCAATTGGAGAGACTTCCAGAAAGGAAGGTTGAAGATGTTCTCAAAATAATGGGAAAGTAG 1305 0.41 MIIPNQEPSSSGSSSSESTSNHYDVFLNFTTETTFTITLCDSLRKKGIDKIFVVPKKLRKKKRKRVLASPDPPTAIKEATVYILVFSEDYASSAHCLDELVEIMESKKKKKKQVVFPIFYQIEPTVVRRQKSKYGEAMDAHQRRFGDERVLKWKKALNEAAGLSGWHFEPGSENDVVEKIVEVAFSKLPPKGLHIGEHIVGLGSRIKDVTSLLNAVPILGIHGTAGVGKTTLAKAAYNSIVHQFQEACFLSDIREAPKECEGMVRLQKTILSEILDEKKKIKFSSVNKGISKINRRLCKKRVLLVLDDVDKKEELEQLMGGRGWFGKGSKVIVTTRNKQLLIDGHIHEYEMTKLNDNDSLELFCQYAFPSDKPTVEYEDMSKRMVNYAQGLPSALKTMGSKLNHKSMDAWKCALDQLERLPERKVEDVLKIMGK 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01148 434 Gene3D - 188 345 IPR027417 -
Accr11g01148 434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 431 IPR027417 -
Accr11g01148 434 Gene3D - 353 432 IPR042197 -
Accr11g01148 434 Pfam NB-ARC domain 218 420 IPR002182 GO:0043531
Accr11g01148 434 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 166 IPR035897 -
Accr11g01148 434 SMART till_3 22 163 IPR000157 GO:0007165
Accr11g01148 434 Pfam TIR domain 23 168 IPR000157 GO:0007165
Accr11g01148 434 PRINTS Disease resistance protein signature 218 233 - -
Accr11g01148 434 PRINTS Disease resistance protein signature 388 402 - -
Accr11g01148 434 PRINTS Disease resistance protein signature 296 310 - -
Accr11g01148 434 ProSiteProfiles TIR domain profile. 21 188 IPR000157 GO:0007165
Accr11g01148 434 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 430 IPR044974 GO:0006952
Accr11g01148 434 Gene3D - 19 187 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01148 Accr-Chr11 25260104 25262112 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01148 75 400 WRKY Transcription Factor Family AT4G12020 28.571 2.81e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01148 - - pcin:129286951 576.63