Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr11g01147 | ATGGGGGTTAGATGGAACCAATTTGGATTATGGTTCAAAATATTTATTGTCTTGATTTCTTCAGGGGAAATTCGAGTGTGTTGGTCGCTGAACGATGAAGGATTAGCCTTGTTGGAGTTCCGAGATAGAATAACTTTTGATCCTTATGAAGCTTTGATGAATTGGAATCCTAATGATGGTAACCCTTGCAATTGGTTGGGTGTTCATTGCATTGACACAAAGGTTCAAATTCTTGACTTAAACTCCTTATCTTTGGAAGGGACATTGGCCCCACAACTTGGGAAGCTTAGTCACTTAAAATCTCTTGTATTGTGCAAGAACAAGTTCTCTGGAACCATTCCCAAGGAACTTGGAGGTTTAGCCAAATTAGAGTTATTGGATTTAAGAGACAATAACTTTACTGGAAGTATTCCAGTGGAAGTTAGCAGCTTACCAGAATTAAAACACTTGTTGCTTTGCAGCAATAACATTAAAGTCAATGTTTTTCAAGATGTTGAGGAGCCCAAATTACCTTCTAAGTGGTTATTTGTCAACAAATGTACTTCACCTATAACATCTGTTTTTGGTGGCTTGAATAGAAAATTTGGAAATGGTGTATGGCAGAGAAATTTTATACTGTTAAACAAGGCTGTTTCTATAGTTATTCAAATTAAAGGAGAACTTGTGAAATACTTCAATGCTTTGGTGCCTCCACTGTTGCAGCTAAATAAAGCTCTTCAAGATTGTCAATTAAATTTATATCACAATGAACATGATTTTCATAAGTCTATGATTGCCCAAGCTATACCAAACATCATCAATTCTGCGCGTCGCATGTTACTTGATCAATCTAGTAACCTCGCTGCTATACCTGTCAGTGTTGGTCTTACCAAACCCGTGGTTCCTTTTCCTGCAACCTTGAGTAGTGGAGCTTTCCCAGCTATACCACATGTCAAGCAACAAAATCTATCACCTGTACCACCTCCAACTGTTAATTCTCCACCTAATACCCCAAATCAAGACCAATCTTCTATTGGAAAGCAAGAACATTCAACTCAAGGCACTTCTAGAAATTTATGGATTTATAGAATTATTATTATTTCATTTGTGGCTGCACTGATCATCATTGCTATGGCTATATTCTGTTTATGGCGAGTAGGAGCAGCCAAAACAATAGCTCCTTGGAAAACAGGAATAAGCGGTCAACTGCAGAAGGCATTTATAACCGGGGTTCCCAAGTTGAATCGACCAGAGTTGGAGACAGCCTGTGAGAATTTCAGCAATATTATTGATAACTCTGTTGATTACACCACATACAAAGGAATATTGTCAAGTGATGTTGAGATAGCTGTTGTTTCTACTACTGTTACTTCTTCCAAAGAATGGTCAAAGAATGCAGAGATGTACTACAAGAAAATGATCAGTACATTGTCTCGTGTTAACCATAAGAACTTTGTCAATCTTATTGGCTTTTGTGAAGAAGAAGAACCATTCACAAGGATGATGGTTTTTGAGTATGCTCCTAATGGTTCTTTGTTCGATCATCTCCATGATAAGGAATATGAAGATCTTGATTGGAAGGCAAGGAAACGGATTATCATGGGAATTGCTTATTGTTTGCAGTACATGCACCATGATCTAATTCCACCCGTAACTCAATCCATCCTTTCTTCATCTTCCATTTATTTAATGGATGATTTAGCTGCTAAGGTAGCATATCATTTTAGCCAGCCATGGATGACAGAAGATGAGTTTTCCAAAGAAAAGGGGTCTGGCCATTTTAAGTCACCACCCAATGAAAATCTTGAAACCGATGTTTATAATTTGGGAATGTTGTTGCTTGAAATAATTTCAGGAAAACTCCCTTACTCTGAAGAACAGGGTCATCTCACTGAATTGGCTGCTGATCACATAAAAAACAACAGAAGCGTCAATGGTATGATTGATTCCATTCTGCAATCATGTGAAAAGGATGAACTTGATGTGATTTGTGAAGTAATACAAGATTGCATCCAAGCTAATCCAAAACTAAGACCTTCAATGAAGGATATAGTTTCCAGATTGAGAGGAGTCATTAACATATCACCCGAAGGAGCAGCTCCAAATCTTTCCCCTCTTTGGTGGGCTGAACTAGAAATATTGTCTGTGGAGACCAATTAA | 2139 | 0.3777 | MGVRWNQFGLWFKIFIVLISSGEIRVCWSLNDEGLALLEFRDRITFDPYEALMNWNPNDGNPCNWLGVHCIDTKVQILDLNSLSLEGTLAPQLGKLSHLKSLVLCKNKFSGTIPKELGGLAKLELLDLRDNNFTGSIPVEVSSLPELKHLLLCSNNIKVNVFQDVEEPKLPSKWLFVNKCTSPITSVFGGLNRKFGNGVWQRNFILLNKAVSIVIQIKGELVKYFNALVPPLLQLNKALQDCQLNLYHNEHDFHKSMIAQAIPNIINSARRMLLDQSSNLAAIPVSVGLTKPVVPFPATLSSGAFPAIPHVKQQNLSPVPPPTVNSPPNTPNQDQSSIGKQEHSTQGTSRNLWIYRIIIISFVAALIIIAMAIFCLWRVGAAKTIAPWKTGISGQLQKAFITGVPKLNRPELETACENFSNIIDNSVDYTTYKGILSSDVEIAVVSTTVTSSKEWSKNAEMYYKKMISTLSRVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGSLFDHLHDKEYEDLDWKARKRIIMGIAYCLQYMHHDLIPPVTQSILSSSSIYLMDDLAAKVAYHFSQPWMTEDEFSKEKGSGHFKSPPNENLETDVYNLGMLLLEIISGKLPYSEEQGHLTELAADHIKNNRSVNGMIDSILQSCEKDELDVICEVIQDCIQANPKLRPSMKDIVSRLRGVINISPEGAAPNLSPLWWAELEILSVETN | 712 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr11g01147 | 712 | FunFam | Inactive receptor-like serine/threonine-protein kinase | 391 | 499 | - | - | |
Accr11g01147 | 712 | Gene3D | Transferase(Phosphotransferase) domain 1 | 500 | 690 | - | - | |
Accr11g01147 | 712 | MobiDBLite | consensus disorder prediction | 329 | 344 | - | - | |
Accr11g01147 | 712 | Gene3D | Phosphorylase Kinase; domain 1 | 394 | 499 | - | - | |
Accr11g01147 | 712 | Pfam | Protein kinase domain | 432 | 679 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr11g01147 | 712 | FunFam | Leucine-rich repeat receptor-like kinase | 34 | 140 | - | - | |
Accr11g01147 | 712 | Pfam | Leucine rich repeat | 97 | 157 | IPR001611 | GO:0005515 | |
Accr11g01147 | 712 | MobiDBLite | consensus disorder prediction | 316 | 344 | - | - | |
Accr11g01147 | 712 | SUPERFAMILY | L domain-like | 28 | 193 | - | - | |
Accr11g01147 | 712 | Gene3D | Ribonuclease Inhibitor | 29 | 193 | IPR032675 | - | |
Accr11g01147 | 712 | ProSiteProfiles | Protein kinase domain profile. | 382 | 685 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr11g01147 | 712 | Pfam | Leucine rich repeat N-terminal domain | 31 | 70 | IPR013210 | - | |
Accr11g01147 | 712 | PANTHER | PROTEIN MALE DISCOVERER 2 | 15 | 710 | - | - | |
Accr11g01147 | 712 | SUPERFAMILY | Protein kinase-like (PK-like) | 412 | 681 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr11g01147 | Accr-Chr11 | 25251699 | 25256625 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr11g01147 | 13 | 685 | Receptor kinase-like Gene Family | AT1G66830 | 24.730 | 5.26e-37 | 145 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VI-2 | Accr11g01147 | Pkinase | 7.7e-15 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr11g01147 | - | - | qsa:O6P43_012777 | 783.867 |