Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01147 ATGGGGGTTAGATGGAACCAATTTGGATTATGGTTCAAAATATTTATTGTCTTGATTTCTTCAGGGGAAATTCGAGTGTGTTGGTCGCTGAACGATGAAGGATTAGCCTTGTTGGAGTTCCGAGATAGAATAACTTTTGATCCTTATGAAGCTTTGATGAATTGGAATCCTAATGATGGTAACCCTTGCAATTGGTTGGGTGTTCATTGCATTGACACAAAGGTTCAAATTCTTGACTTAAACTCCTTATCTTTGGAAGGGACATTGGCCCCACAACTTGGGAAGCTTAGTCACTTAAAATCTCTTGTATTGTGCAAGAACAAGTTCTCTGGAACCATTCCCAAGGAACTTGGAGGTTTAGCCAAATTAGAGTTATTGGATTTAAGAGACAATAACTTTACTGGAAGTATTCCAGTGGAAGTTAGCAGCTTACCAGAATTAAAACACTTGTTGCTTTGCAGCAATAACATTAAAGTCAATGTTTTTCAAGATGTTGAGGAGCCCAAATTACCTTCTAAGTGGTTATTTGTCAACAAATGTACTTCACCTATAACATCTGTTTTTGGTGGCTTGAATAGAAAATTTGGAAATGGTGTATGGCAGAGAAATTTTATACTGTTAAACAAGGCTGTTTCTATAGTTATTCAAATTAAAGGAGAACTTGTGAAATACTTCAATGCTTTGGTGCCTCCACTGTTGCAGCTAAATAAAGCTCTTCAAGATTGTCAATTAAATTTATATCACAATGAACATGATTTTCATAAGTCTATGATTGCCCAAGCTATACCAAACATCATCAATTCTGCGCGTCGCATGTTACTTGATCAATCTAGTAACCTCGCTGCTATACCTGTCAGTGTTGGTCTTACCAAACCCGTGGTTCCTTTTCCTGCAACCTTGAGTAGTGGAGCTTTCCCAGCTATACCACATGTCAAGCAACAAAATCTATCACCTGTACCACCTCCAACTGTTAATTCTCCACCTAATACCCCAAATCAAGACCAATCTTCTATTGGAAAGCAAGAACATTCAACTCAAGGCACTTCTAGAAATTTATGGATTTATAGAATTATTATTATTTCATTTGTGGCTGCACTGATCATCATTGCTATGGCTATATTCTGTTTATGGCGAGTAGGAGCAGCCAAAACAATAGCTCCTTGGAAAACAGGAATAAGCGGTCAACTGCAGAAGGCATTTATAACCGGGGTTCCCAAGTTGAATCGACCAGAGTTGGAGACAGCCTGTGAGAATTTCAGCAATATTATTGATAACTCTGTTGATTACACCACATACAAAGGAATATTGTCAAGTGATGTTGAGATAGCTGTTGTTTCTACTACTGTTACTTCTTCCAAAGAATGGTCAAAGAATGCAGAGATGTACTACAAGAAAATGATCAGTACATTGTCTCGTGTTAACCATAAGAACTTTGTCAATCTTATTGGCTTTTGTGAAGAAGAAGAACCATTCACAAGGATGATGGTTTTTGAGTATGCTCCTAATGGTTCTTTGTTCGATCATCTCCATGATAAGGAATATGAAGATCTTGATTGGAAGGCAAGGAAACGGATTATCATGGGAATTGCTTATTGTTTGCAGTACATGCACCATGATCTAATTCCACCCGTAACTCAATCCATCCTTTCTTCATCTTCCATTTATTTAATGGATGATTTAGCTGCTAAGGTAGCATATCATTTTAGCCAGCCATGGATGACAGAAGATGAGTTTTCCAAAGAAAAGGGGTCTGGCCATTTTAAGTCACCACCCAATGAAAATCTTGAAACCGATGTTTATAATTTGGGAATGTTGTTGCTTGAAATAATTTCAGGAAAACTCCCTTACTCTGAAGAACAGGGTCATCTCACTGAATTGGCTGCTGATCACATAAAAAACAACAGAAGCGTCAATGGTATGATTGATTCCATTCTGCAATCATGTGAAAAGGATGAACTTGATGTGATTTGTGAAGTAATACAAGATTGCATCCAAGCTAATCCAAAACTAAGACCTTCAATGAAGGATATAGTTTCCAGATTGAGAGGAGTCATTAACATATCACCCGAAGGAGCAGCTCCAAATCTTTCCCCTCTTTGGTGGGCTGAACTAGAAATATTGTCTGTGGAGACCAATTAA 2139 0.3777 MGVRWNQFGLWFKIFIVLISSGEIRVCWSLNDEGLALLEFRDRITFDPYEALMNWNPNDGNPCNWLGVHCIDTKVQILDLNSLSLEGTLAPQLGKLSHLKSLVLCKNKFSGTIPKELGGLAKLELLDLRDNNFTGSIPVEVSSLPELKHLLLCSNNIKVNVFQDVEEPKLPSKWLFVNKCTSPITSVFGGLNRKFGNGVWQRNFILLNKAVSIVIQIKGELVKYFNALVPPLLQLNKALQDCQLNLYHNEHDFHKSMIAQAIPNIINSARRMLLDQSSNLAAIPVSVGLTKPVVPFPATLSSGAFPAIPHVKQQNLSPVPPPTVNSPPNTPNQDQSSIGKQEHSTQGTSRNLWIYRIIIISFVAALIIIAMAIFCLWRVGAAKTIAPWKTGISGQLQKAFITGVPKLNRPELETACENFSNIIDNSVDYTTYKGILSSDVEIAVVSTTVTSSKEWSKNAEMYYKKMISTLSRVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGSLFDHLHDKEYEDLDWKARKRIIMGIAYCLQYMHHDLIPPVTQSILSSSSIYLMDDLAAKVAYHFSQPWMTEDEFSKEKGSGHFKSPPNENLETDVYNLGMLLLEIISGKLPYSEEQGHLTELAADHIKNNRSVNGMIDSILQSCEKDELDVICEVIQDCIQANPKLRPSMKDIVSRLRGVINISPEGAAPNLSPLWWAELEILSVETN 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01147 712 FunFam Inactive receptor-like serine/threonine-protein kinase 391 499 - -
Accr11g01147 712 Gene3D Transferase(Phosphotransferase) domain 1 500 690 - -
Accr11g01147 712 MobiDBLite consensus disorder prediction 329 344 - -
Accr11g01147 712 Gene3D Phosphorylase Kinase; domain 1 394 499 - -
Accr11g01147 712 Pfam Protein kinase domain 432 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01147 712 FunFam Leucine-rich repeat receptor-like kinase 34 140 - -
Accr11g01147 712 Pfam Leucine rich repeat 97 157 IPR001611 GO:0005515
Accr11g01147 712 MobiDBLite consensus disorder prediction 316 344 - -
Accr11g01147 712 SUPERFAMILY L domain-like 28 193 - -
Accr11g01147 712 Gene3D Ribonuclease Inhibitor 29 193 IPR032675 -
Accr11g01147 712 ProSiteProfiles Protein kinase domain profile. 382 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01147 712 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Accr11g01147 712 PANTHER PROTEIN MALE DISCOVERER 2 15 710 - -
Accr11g01147 712 SUPERFAMILY Protein kinase-like (PK-like) 412 681 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01147 Accr-Chr11 25251699 25256625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01147 13 685 Receptor kinase-like Gene Family AT1G66830 24.730 5.26e-37 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Accr11g01147 Pkinase 7.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01147 - - qsa:O6P43_012777 783.867