Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01146 ATGGGGGTTAGATGGAACCAATTTGGATTATGGTTCAAAATATTTATTGTCTTGATTTCTTCAGGGGAAATTCGAGTGTGTTGGTCGCTGAACGATGAAGGATTAGCCTTGTTGGAGTTCCGAGATAGAATAACTTTTGATCCTTATGAAGCTTTGATGAATTGGAATCCTAATGATGGTAACCCTTGCAATTGGTTGGGTGTTCATTGCATTGACACAAAGGTTCAAATTCTTGACTTAAACTCCTTATCTTTGGAAGGGACATTGGCCCCACAACTTGGGAAGCTTAGTCACTTAAAATCTCTTGTATTGTGCAAGAACAAGTTCTCTGGAACCATTCCCAAGGAACTTGGAGGTTTAGCCAAATTAGAGTTATTGGATTTAAGAGACAATAACTTTACTGGAAGTATTCCAGTGGAAGTTAGCAGCTTACCAGAATTAAAACACTTGTTGCTTTGCAGCAATAACATTAAAGTCAATGTTTTTCAAGATGTTGAGGAGCCCAAATTACCTTCTAAGTGGTTATTTGTCAACAAATGTACTTCACCTATAACATCTGTTTTTGGTGGCTTGAATAGAAAATTTGGAAATGGGTTGCAGCTAAATAAAGCTCTTCAAGATTGTCAATTAAATTTATATCACAATGAACATGATTTTCATAAGTCTATGATTGCCCAAGCTATACCAAACATCATCAATTCTGCGCGTCGCATGTTACTTGATCAATCTAGTAACCTCGCTGCTATACCTGTCAGTGTTGGTCTTACCAAACCCGTGGTTCCTTTTCCTGCAACCTTGAGTAGTGGAGCTTTCCCAGCTATACCACATGTCAAGCAACAAAATCTATCACCTGTACCACCTCCAACTGTTAATTCTCCACCTAATACCCCAAATCAAGACCAATCTTCTATTGGAAAGCAAGAACATTCAACTCAAGGCACTTCTAGAAATTTATGGATTTATAGAATTATTATTATTTCATTTGTGGCTGCACTGATCATCATTGCTATGGCTATATTCTGTTTATGGCGAGTAGGAGCAGCCAAAACAATAGCTCCTTGGAAAACAGGAATAAGCGGTCAACTGCAGAAGGCATTTATAACCGGGGTTCCCAAGTTGAATCGACCAGAGTTGGAGACAGCCTGTGAGAATTTCAGCAATATTATTGATAACTCTGTTGATTACACCACATACAAAGGAATATTGTCAAGTGATGTTGAGATAGCTGTTGTTTCTACTACTGTTACTTCTTCCAAAGAATGGTCAAAGAATGCAGAGATGTACTACAAGAAAATGATCAGTACATTGTCTCGTGTTAACCATAAGAACTTTGTCAATCTTATTGGCTTTTGTGAAGAAGAAGAACCATTCACAAGGATGATGGTTTTTGAGTATGCTCCTAATGGTTCTTTGTTCGATCATCTCCATGATAAGGAATATGAAGATCTTGATTGGAAGGCAAGGAAACGGATTATCATGGGAATTGCTTATTGTTTGCAGTACATGCACCATGATCTAATTCCACCCGTAACTCAATCCATCCTTTCTTCATCTTCCATTTATTTAATGGATGATTTAGCTGCTAAGGTAGCATATCATTTTAGCCAGCCATGGATGACAGAAGATGAGTTTTCCAAAGAAAAGGGGTCTGGCCATTTTAAGTCACCACCCAATGAAAATCTTGAAACCGATGTTTATAATTTGGGAATGTTGTTGCTTGAAATAATTTCAGGAAAACTCCCTTACTCTGAAGAACAGGGTCATCTCACTGAATTGGCTGCTGATCACATAAAAAACAACAGAAGCGTCAATGGTATGATTGATTCCATTCTGCAATCATGTGAAAAGGATGAACTTGATGTGATTTGTGAAGTAATACAAGATTGCATCCAAGCTAATCCAAAACTAAGACCTTCAATGAAGGATATAGTTTCCAGATTGAGAGGAGTCATTAACATATCACCCGAAGGAGCAGCTCCAAATCTTTCCCCTCTTTGGTGGGCTGAACTAGAAATATTGTCTGTGGAGACCAATTAA 2037 0.38 MGVRWNQFGLWFKIFIVLISSGEIRVCWSLNDEGLALLEFRDRITFDPYEALMNWNPNDGNPCNWLGVHCIDTKVQILDLNSLSLEGTLAPQLGKLSHLKSLVLCKNKFSGTIPKELGGLAKLELLDLRDNNFTGSIPVEVSSLPELKHLLLCSNNIKVNVFQDVEEPKLPSKWLFVNKCTSPITSVFGGLNRKFGNGLQLNKALQDCQLNLYHNEHDFHKSMIAQAIPNIINSARRMLLDQSSNLAAIPVSVGLTKPVVPFPATLSSGAFPAIPHVKQQNLSPVPPPTVNSPPNTPNQDQSSIGKQEHSTQGTSRNLWIYRIIIISFVAALIIIAMAIFCLWRVGAAKTIAPWKTGISGQLQKAFITGVPKLNRPELETACENFSNIIDNSVDYTTYKGILSSDVEIAVVSTTVTSSKEWSKNAEMYYKKMISTLSRVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGSLFDHLHDKEYEDLDWKARKRIIMGIAYCLQYMHHDLIPPVTQSILSSSSIYLMDDLAAKVAYHFSQPWMTEDEFSKEKGSGHFKSPPNENLETDVYNLGMLLLEIISGKLPYSEEQGHLTELAADHIKNNRSVNGMIDSILQSCEKDELDVICEVIQDCIQANPKLRPSMKDIVSRLRGVINISPEGAAPNLSPLWWAELEILSVETN 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01146 678 SUPERFAMILY L domain-like 28 194 - -
Accr11g01146 678 Gene3D Ribonuclease Inhibitor 29 234 IPR032675 -
Accr11g01146 678 Pfam Protein kinase domain 398 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01146 678 FunFam Nuclear pore complex protein NUP107 30 185 - -
Accr11g01146 678 SUPERFAMILY Protein kinase-like (PK-like) 378 647 IPR011009 -
Accr11g01146 678 Pfam Leucine rich repeat 97 157 IPR001611 GO:0005515
Accr11g01146 678 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Accr11g01146 678 Gene3D Phosphorylase Kinase; domain 1 360 465 - -
Accr11g01146 678 MobiDBLite consensus disorder prediction 295 310 - -
Accr11g01146 678 FunFam Inactive receptor-like serine/threonine-protein kinase 357 465 - -
Accr11g01146 678 ProSiteProfiles Protein kinase domain profile. 348 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01146 678 Gene3D Transferase(Phosphotransferase) domain 1 466 656 - -
Accr11g01146 678 PANTHER PROTEIN MALE DISCOVERER 2 15 676 - -
Accr11g01146 678 MobiDBLite consensus disorder prediction 282 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01146 Accr-Chr11 25251699 25256625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01146 13 651 Receptor kinase-like Gene Family AT1G66830 24.795 3.44e-38 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Accr11g01146 Pkinase 7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01146 - - qsa:O6P43_012777 743.806