Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01141 ATGAGACCCTTTTTTAGATTCTTGATTCTTCTGCCTCTGCTTGCTCTTGTTGAATCTTCTTCTTCCTCCTCCTCCTGCAAACTTAGTCCACAAGACCTCGACCTAGTGTCCAAGGCCTTCAAATCAGTCTCCGGATTCAACGTTTCCTGGTTATTTCACTGCTCCGTCGTCGACGATCAGTTCACGGCCATAAGGCTTACTTCCAAGAATCTCCGAGGGGCTATTTCGTGGAAGTTTCTGAGGAACGTTTCAAACTTGCAGGTTCTTGATCTCTCTGGGAATTCTCTTCAAGGTCAAATCCCTGGTTGGTTCTGGGCAAAATCGAGCTTACTGGAGGTTAATCTTTCCAATAACAGGTTCGGAGGCACTATTAATGGCTCCTTCGTTTCTTCTCTTCAAATGTTTAATCTCTCACACAATAGGTTCACAAATCAAGTTCAGCTTTCTGGGTTTTCTAAGCTGAAAGTTCTTGACCTTTCTCATAACAATCTGAAATACCTCCCTTTTGGGTTTCAGAAGCTTACCTACCTCAACTACCTTGACCTATCCAACTGTAAAATCAAAGGAAATGTCAAACCTGTCTCTGCTTTGAACTCACTGAGTTACCTGGACCTCTCAAATAACGAGTTGAATGGTACTTTCCCTTCTGATTTCCCTCATCTTGATACCCTTCATTTCTTGAACATCTCTCACAACAATTTCAGAGCTGTACTTAGCTTCAATGCGTACAAGAAGAAATTCGGCAAATCAGCTTTCCTTTACGCTGGTGCCAATTTCAATTACAACGCCTCCAAAACGGCGCCGTTTCATCACCCTTCGTTTCACTCTCCGAAACGAAACACGATTAAGAAACGACCCAAATCAAAATCTAAAAGACTGATACTCTCTGTGTGCTCTGCTTCAGGAATCGTCGTTGTTCTATTGTGTATTTCTATATTCTGCATCTACAGAAAGAAGAGACGATTGGCTAAGAGAAATAAATGGGCGATCTCAAAGCCAGTCCCACCATTGCCTTTCAAGGTTGACAAATCTGGACCGTTCGCTTTCGAGACGGAATCAGGTACGTCGTGGGTGGCTGATCTGAAGGAGCCATCGTCGGCGCCGGTAGTGATGTTCGAGAAGCCATTGATGAACCTGAGCTTCAAGGACCTTATCGCTGCCACGTCACACTTCGGCAAGGACTCTCTGCTCGCCGAGGGGAGGTGTGGTCCCGTCTACAGAGCCGTCTTACCCGCCGGCGGAGACATCCACGTGGCAATCAAGGTTCTGGAGAACGCCAGAGACGTCGATCATGACGACGCTGTCGAGTTGTTCGTTGAACTCTCAAAGCTGAAGCACCCAAACGTACTGCCACTCTCCGGTTATTGTATTGCAGGCAAGGAGAAGTTGGTGTTGTACGAGTTCATGTCGAACGGCGATTTAGGAAGGTGGCTTCATGAGTTGCCAACCGGGACTACTAACGTGGAGGATTGGAGTGGCGACACGTGGGAGATTCAAAACGGCGTTGGGTCTCAGGCACCCTCTCCGGAAACCATGGGTTGGGGAACACGACACCGTATCGCCGTTGGGATAGCACGTGGCTTGGCATATCTCCACCATGCCGGATCAAAGCCTGTCGTACACGGCCACCTGGTCACTTCCAATATCTTACTAGCCGACGACTTTGAGCCCCGAATAGCGGATTTTGGGTTTAGGAAAATCGGGCAGCAAGATAAGCCGAATTGCACGACGGAGACGGACGTTTACTGCTTCGGTGTCGTGTTGATGGAACTCTTAACGGGGAGGGCTGGCACGGCGGAGACAGTGGTGTTGGTTAGGAAGATGGTGAGGGAGGGAAATGGGGTGAGCGTGTTGGATGAGAGGCTGATAGATGGCGGCGGTGAGTTGGAGAGGGAGATGACGGAGAGCCTTCGAGTGGCGTTCTTGTGTACGGCGGAGTCACCGGGGAAGAGGCCCACCATGCAGCAAATCCTGGGTTTGCTCAAAGACATTCATCTTATTGGTGGACCCTATCAGGCTCCAGTCGGAACAACTGGCTGTTTGAGTTAA 2049 0.488 MRPFFRFLILLPLLALVESSSSSSSCKLSPQDLDLVSKAFKSVSGFNVSWLFHCSVVDDQFTAIRLTSKNLRGAISWKFLRNVSNLQVLDLSGNSLQGQIPGWFWAKSSLLEVNLSNNRFGGTINGSFVSSLQMFNLSHNRFTNQVQLSGFSKLKVLDLSHNNLKYLPFGFQKLTYLNYLDLSNCKIKGNVKPVSALNSLSYLDLSNNELNGTFPSDFPHLDTLHFLNISHNNFRAVLSFNAYKKKFGKSAFLYAGANFNYNASKTAPFHHPSFHSPKRNTIKKRPKSKSKRLILSVCSASGIVVVLLCISIFCIYRKKRRLAKRNKWAISKPVPPLPFKVDKSGPFAFETESGTSWVADLKEPSSAPVVMFEKPLMNLSFKDLIAATSHFGKDSLLAEGRCGPVYRAVLPAGGDIHVAIKVLENARDVDHDDAVELFVELSKLKHPNVLPLSGYCIAGKEKLVLYEFMSNGDLGRWLHELPTGTTNVEDWSGDTWEIQNGVGSQAPSPETMGWGTRHRIAVGIARGLAYLHHAGSKPVVHGHLVTSNILLADDFEPRIADFGFRKIGQQDKPNCTTETDVYCFGVVLMELLTGRAGTAETVVLVRKMVREGNGVSVLDERLIDGGGELEREMTESLRVAFLCTAESPGKRPTMQQILGLLKDIHLIGGPYQAPVGTTGCLS 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01141 682 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 31 664 - -
Accr11g01141 682 Pfam Protein tyrosine and serine/threonine kinase 395 658 IPR001245 GO:0004672|GO:0006468
Accr11g01141 682 SUPERFAMILY L domain-like 60 238 - -
Accr11g01141 682 Gene3D Phosphorylase Kinase; domain 1 351 468 - -
Accr11g01141 682 ProSiteProfiles Leucine-rich repeat profile. 153 175 IPR001611 GO:0005515
Accr11g01141 682 FunFam Putative LRR receptor-like serine/threonine-protein kinase 352 468 - -
Accr11g01141 682 PRINTS Leucine-rich repeat signature 197 210 - -
Accr11g01141 682 PRINTS Leucine-rich repeat signature 154 167 - -
Accr11g01141 682 Gene3D Transferase(Phosphotransferase) domain 1 469 574 - -
Accr11g01141 682 SMART LRR_typ_2 83 106 IPR003591 -
Accr11g01141 682 SMART LRR_typ_2 151 173 IPR003591 -
Accr11g01141 682 SMART LRR_typ_2 197 220 IPR003591 -
Accr11g01141 682 ProSiteProfiles Protein kinase domain profile. 391 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr11g01141 682 Gene3D Transferase(Phosphotransferase) domain 1 575 666 - -
Accr11g01141 682 Gene3D Ribonuclease Inhibitor 127 264 IPR032675 -
Accr11g01141 682 Pfam Leucine rich repeat 131 187 IPR001611 GO:0005515
Accr11g01141 682 Pfam Leucine rich repeat 70 120 IPR001611 GO:0005515
Accr11g01141 682 Gene3D Ribonuclease Inhibitor 31 126 IPR032675 -
Accr11g01141 682 SUPERFAMILY Protein kinase-like (PK-like) 368 661 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01141 Accr-Chr11 25164889 25168077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01141 39 664 Receptor kinase-like Gene Family AT5G07280 31.204 5.85e-72 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Accr11g01141 PK_Tyr_Ser-Thr 2.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01141 - - gmx:100778920 879.396