Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01104 ATGAAGTGGGGTAGAAGAAAATCCTCCACGGTTTCTTCTTCATCTAAACCATCTTTCATGTCTCGTGTATCTCCCCTTTCATGGCTAGCCAAGTTCAAGAAGATGAGAATCAGCACAGAGCCAGTTCCTGGAAAATTGAAACAAACTCCTCTGCAGAATTCTCCATCAGTTACTTCAATGCAGTATAGTTGGGGTAATGGTGGTAGATTTTATGGTGGGGATGATGATGCCTTTTGGAGACTTTCGTTTGGAGAAGAGAGCCAAGAAGATAAGAAAAGCAAAAATACTTTGAAACCAGTAATGCACAATTCGGATATAGGTGGTAGATGGAATCCTGAGAAACAGGAAAAAACAAGAGAAGGGACTTCAACGTTCAAGGAGGATCGAAGAAAGTTGCCAAATGATACGAATATTTCATCAGAGATCAATGAGCTTAATCGAGAGAAGGAATTTGAAAACTTGAGGAGGAGATTTGAGAGGAAAGCTCAAAGAGTTTTGCAAGAGCAAGTCTTAAAATTGGAAAGAAAAAAAGAGGAAGCATCAGCTTTATTAGTAGAGAAAGAGACGCCAGAACTTGGATCCCCTGGAACAATTTTGACACCAAGAAGACAATCTTTTGCTCATTTGGAAGATCTTAAGAAGTCTAGCCACGCACGAATGAAAGATCATGCATTTAATACTCAGAGATTTCGGAAACATGAGAGACAGAATTTACATCAAACTGAGGAGTTGAAGGCGAAGACTGAAAAGAAGAGTCAAGAACTTCAAGTGAGCAGAGAAATCCAAAGGAGGAAATCAAAGCAGAGCTCTAAGGTCAAAGTGTTTTCTCCAAGGAGCTCCAATGTCGAAATCTGTAAAGTAAAGGCAATAGAAGACATGAGAAAAGCCAAATTAAAGATGAAGAAAGCAAAGGAGAAAATCAGGAAGGGAACACAAGGCTTAGATAGCTTTGCTGTGGTAAAGTTTTCGTTGGACCCACAACAAGATTTCAGAGATTCAATGGTTGAGATGATCAGAGAGAAGCAGATCAGCCAGCCAGAAGAAATGGAAGAGCTTTTAGCATGTTATCTGACTTTGAATTCTGATGAATATCATGATCTCATCATCAAGGTGTTTCGGCAGGTATGGTTCAACATGAACTTAGTACTTAGATGGTAA 1158 0.3946 MKWGRRKSSTVSSSSKPSFMSRVSPLSWLAKFKKMRISTEPVPGKLKQTPLQNSPSVTSMQYSWGNGGRFYGGDDDAFWRLSFGEESQEDKKSKNTLKPVMHNSDIGGRWNPEKQEKTREGTSTFKEDRRKLPNDTNISSEINELNREKEFENLRRRFERKAQRVLQEQVLKLERKKEEASALLVEKETPELGSPGTILTPRRQSFAHLEDLKKSSHARMKDHAFNTQRFRKHERQNLHQTEELKAKTEKKSQELQVSREIQRRKSKQSSKVKVFSPRSSNVEICKVKAIEDMRKAKLKMKKAKEKIRKGTQGLDSFAVVKFSLDPQQDFRDSMVEMIREKQISQPEEMEELLACYLTLNSDEYHDLIIKVFRQVWFNMNLVLRW 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01104 385 Coils Coil 286 306 - -
Accr11g01104 385 MobiDBLite consensus disorder prediction 109 135 - -
Accr11g01104 385 MobiDBLite consensus disorder prediction 85 143 - -
Accr11g01104 385 MobiDBLite consensus disorder prediction 45 59 - -
Accr11g01104 385 MobiDBLite consensus disorder prediction 1 22 - -
Accr11g01104 385 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 214 379 IPR038933 GO:0045892
Accr11g01104 385 MobiDBLite consensus disorder prediction 244 267 - -
Accr11g01104 385 ProSiteProfiles OVATE domain profile. 319 378 IPR006458 -
Accr11g01104 385 NCBIfam uncharacterized plant-specific domain TIGR01568 318 379 IPR006458 -
Accr11g01104 385 Coils Coil 231 258 - -
Accr11g01104 385 Coils Coil 148 186 - -
Accr11g01104 385 Pfam Transcriptional repressor, ovate 323 379 IPR006458 -
Accr11g01104 385 MobiDBLite consensus disorder prediction 244 273 - -
Accr11g01104 385 MobiDBLite consensus disorder prediction 40 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01104 Accr-Chr11 23785891 23787048 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Accr11g01104 Ovate 3.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01104 - - qsa:O6P43_012832 355.525