Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01103 ATGAAGTGGGGTAGAAGAAAATCCTCCACGGTTTCTTCTTCATCTAAACCATCTTTCATGTCTCGTGTATCTCCCCTTTCATGGCTAGCCAAGTTCAAGAAGATGAGAATCAGCACAGAGCCAGTTCCTGGAAAATTGAAACAAACTCCTCTGCAGAATTCTCCATCAGTTACTTCAATGCAGTATAGTTGGGGTAATGGTGGTAGATTTTATGGTGGGGATGATGATGCCTTTTGGAGACTTTCGTTTGGAGAAGAGAGCCAAGAAGATAAGAAAAGCAAAAATACTTTGAAACCAGTAATGCACAATTCGGATATAGGTGGTAGATGGAATCCTGAGAAACAGGAAAAAACAAGAGAAGGGACTTCAACGTTCAAGGAGGATCGAAGAAAGTTGCCAAATGATACGAATATTTCATCAGAGATCAATGAGCTTAATCGAGAGAAGGAATTTGAAAACTTGAGGAGGAGATTTGAGAGGAAAGCTCAAAGAGTTTTGCAAGAGCAAGTCTTAAAATTGGAAAGAAAAAAAGAGGAAGCATCAGCTTTATTAGTAGAGAAAGAGACGCCAGAACTTGGATCCCCTGGAACAATTTTGACACCAAGAAGACAATCTTTTGCTCATTTGGAAGATCTTAAGAAGTCTAGCCACGCACGAATGAAAGATCATGCATTTAATACTCAGAGATTTCGGAAACATGAGAGACAGAATTTACATCAAACTGAGGAGTTGAAGGCGAAGACTGAAAAGAAGAGTCAAGAACTTCAAGTGAGCAGAGAAATCCAAAGGAGGAAATCAAAGCAGAGCTCTAAGGTCAAAGTGTTTTCTCCAAGGAGCTCCAATGTCGAAATCTGTAAAGTAAAGGCAATAGAAGACATGAGAAAAGCCAAATTAAAGATGAAGAAAGCAAAGGAGAAAATCAGGAAGGGAACACAAGGCTTAGATAGCTTTGCTGTGGTAAAGTTTTCGTTGGACCCACAACAAGATTTCAGAGATTCAATGGTTGAGATGATCAGAGAGAAGCAGATCAGCCAGCCAGAAGAAATGGAAGAGCTTTTAGCATGTTATCTGACTTTGAATTCTGATGAATATCATGATCTCATCATCAAGGTGTTTCGGCAGGTAAAATCCATTCCTTCCTTCAAATCTTCTGCATGA 1158 0.3955 MKWGRRKSSTVSSSSKPSFMSRVSPLSWLAKFKKMRISTEPVPGKLKQTPLQNSPSVTSMQYSWGNGGRFYGGDDDAFWRLSFGEESQEDKKSKNTLKPVMHNSDIGGRWNPEKQEKTREGTSTFKEDRRKLPNDTNISSEINELNREKEFENLRRRFERKAQRVLQEQVLKLERKKEEASALLVEKETPELGSPGTILTPRRQSFAHLEDLKKSSHARMKDHAFNTQRFRKHERQNLHQTEELKAKTEKKSQELQVSREIQRRKSKQSSKVKVFSPRSSNVEICKVKAIEDMRKAKLKMKKAKEKIRKGTQGLDSFAVVKFSLDPQQDFRDSMVEMIREKQISQPEEMEELLACYLTLNSDEYHDLIIKVFRQVKSIPSFKSSA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01103 385 Coils Coil 286 306 - -
Accr11g01103 385 MobiDBLite consensus disorder prediction 109 135 - -
Accr11g01103 385 MobiDBLite consensus disorder prediction 85 143 - -
Accr11g01103 385 MobiDBLite consensus disorder prediction 45 59 - -
Accr11g01103 385 MobiDBLite consensus disorder prediction 1 22 - -
Accr11g01103 385 MobiDBLite consensus disorder prediction 244 267 - -
Accr11g01103 385 ProSiteProfiles OVATE domain profile. 319 378 IPR006458 -
Accr11g01103 385 NCBIfam uncharacterized plant-specific domain TIGR01568 318 375 IPR006458 -
Accr11g01103 385 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 214 376 IPR038933 GO:0045892
Accr11g01103 385 Pfam Transcriptional repressor, ovate 323 375 IPR006458 -
Accr11g01103 385 Coils Coil 231 258 - -
Accr11g01103 385 Coils Coil 148 186 - -
Accr11g01103 385 MobiDBLite consensus disorder prediction 40 59 - -
Accr11g01103 385 MobiDBLite consensus disorder prediction 244 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01103 Accr-Chr11 23785728 23787048 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Accr11g01103 Ovate 2.8e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01103 - - qsa:O6P43_012832 343.584