Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01099 ATGGCTGTGGCTTCTGCAACTAATGAAACTGATGAGGTATTTGCTCTTAACGTCCAAGGCAAATCCAATAATGATGAAGATGCCTGCGTCTCCGTCATCGTCCCTTTCTTGCAGAAGTTGGTGGCTGAGTTCGTGGGGACATTTTTTCTGATGTTTGCCGGACAAGCGTCAGAGGTGGTGGATGAGGGATACGGTAACAAAATAACGCTTCCTGGGACTGCTGTAGTTTGGGGTCTTACCGTTTTGGTTCTTGTCTATGCCGTCAGTCACATCTCCGGCGCCCATTTTAATCCGGCCGTCACCCTCGCTTTTGCTTCTACCGGACGATTCCCCCTCAAACAGGTACCAGCTTATATATCAGTTCAGCTTCTGGCGTCCATTCTTGCGAGTGGGACACTAAGGCTTATTTTTGAAGGAAGCCATGACCACTTCTCAGGAACAAGATTATCAGGGACGCATCTTCAAGGTTTTGTGATTGAGTTCATCATCACCTTCTACATCATGCTTGTTAAGTATTCTACCAGTGGTTTGTCGTCCGATAACAGGGAGATGAGTCAGGTGGCTGGTCTGGCAGTAGGGTCAACCATGTTGCTTAATGTGATGTTTGCCGGGCCGGTGACTGGAGCATCAATGAACCCAGCGAGAAGCTTAGGGCCGGCGATAGTTTGGCATAAATATAAAGCAATATGGGTGTACGTGACAGCACCGGTAGCCGGAGCAGTGACAGGGGCATGGGTGTATAACATCATGGTTCATAAAACAAAGCCAATACAAGTTATCACAAAAGCTTCAAACCTTTATGATTCCTCCAAGTGA 816 0.4743 MAVASATNETDEVFALNVQGKSNNDEDACVSVIVPFLQKLVAEFVGTFFLMFAGQASEVVDEGYGNKITLPGTAVVWGLTVLVLVYAVSHISGAHFNPAVTLAFASTGRFPLKQVPAYISVQLLASILASGTLRLIFEGSHDHFSGTRLSGTHLQGFVIEFIITFYIMLVKYSTSGLSSDNREMSQVAGLAVGSTMLLNVMFAGPVTGASMNPARSLGPAIVWHKYKAIWVYVTAPVAGAVTGAWVYNIMVHKTKPIQVITKASNLYDSSK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01099 271 PRINTS Major intrinsic protein family signature 230 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01099 271 PRINTS Major intrinsic protein family signature 159 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01099 271 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01099 271 PRINTS Major intrinsic protein family signature 114 133 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01099 271 PRINTS Major intrinsic protein family signature 193 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01099 271 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01099 271 Pfam Major intrinsic protein 34 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01099 271 PANTHER AQUAPORIN NIP2-1 23 255 IPR034294 -
Accr11g01099 271 NCBIfam MIP family channel protein 42 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01099 271 SUPERFAMILY Aquaporin-like 32 261 IPR023271 -
Accr11g01099 271 CDD MIP 38 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01099 271 Gene3D Glycerol uptake facilitator protein. 4 259 IPR023271 -
Accr11g01099 271 ProSitePatterns MIP family signature. 95 103 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01099 Accr-Chr11 23580697 23586338 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01099 17 269 Major Intrinsic Protein MIP AT5G37820 48.627 4.80e-78 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01099 K09874 - cpap:110809350 310.071