Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01097 ATGGCGGAGGCGTCTGCAGCAAATGGAACCCACGAGGTTGTTCTGAACGTCAACGACAAATCCAATGAAGATTCCGGCATCTCTATCTCCGTCCCTTTCTTGCAGAAGTTAGTGGCAGAATTCGCGGGAACATACTTTCTGTTATTTGCCGGCCAAGCAGCGGTGATGGTGGACAAGGGCTACGACAACCAAGTAACACATCCTGGGATTTCAATAGTTTGGGGTCTTGTGGTTATGGTTCTTGTCTATGCCGTTGGTCACATCTCTGGTGCTCATTTCAGTCCTGCTGTCACTCTTGGGTTTGCTTCCACCAAACGTTTTCCCCTCAAACAGGTACCAGCTTATGTATCAGTTCAGATTGTGGCATCGACTCTTGCGAGTGGGACTCTGAGACTTATATTTCAAGGAAGCAAAGACAACTTCCCAGGAACATTAGTGTCTGGGACGTATTTACAAGGTTTTGTGGTTGAGTTCATCATCACCTTCTACCTCATGTTTGTTATATCTGGTGTGGCGACAGATAACAGAGCGATTGGTGAGCTGGCTGGTCTTGCGGTGGGGTCTACAGTGTTGCTTAATGTCATGTTTGCTGGGCCGGTGACCGGAGCTTCCATGAGCCCAGCGAGAACCTTAGGGCCAGCAATAGTGTGGCACGAATATGAAGGAATATGGGTATACATGACAGCGCCGGTGGCCGGAGCAGTGGCCGGGGCATGGGTGTATAACATCATTAGGTACACAGACAAGCCAACATGGGAGATCACAAAGGGTGCTTCTCTCCTCAAAGCTTCAAAACGCTGTCGTCCTTCCATGTGA 816 0.4926 MAEASAANGTHEVVLNVNDKSNEDSGISISVPFLQKLVAEFAGTYFLLFAGQAAVMVDKGYDNQVTHPGISIVWGLVVMVLVYAVGHISGAHFSPAVTLGFASTKRFPLKQVPAYVSVQIVASTLASGTLRLIFQGSKDNFPGTLVSGTYLQGFVVEFIITFYLMFVISGVATDNRAIGELAGLAVGSTVLLNVMFAGPVTGASMSPARTLGPAIVWHEYEGIWVYMTAPVAGAVAGAWVYNIIRYTDKPTWEITKGASLLKASKRCRPSM 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01097 271 PRINTS Major intrinsic protein family signature 224 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01097 271 PRINTS Major intrinsic protein family signature 74 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01097 271 PRINTS Major intrinsic protein family signature 156 174 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01097 271 PRINTS Major intrinsic protein family signature 111 130 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01097 271 PRINTS Major intrinsic protein family signature 187 209 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01097 271 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01097 271 CDD MIP 35 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01097 271 PANTHER AQUAPORIN NIP2-1 22 257 IPR034294 -
Accr11g01097 271 SUPERFAMILY Aquaporin-like 30 255 IPR023271 -
Accr11g01097 271 Gene3D Glycerol uptake facilitator protein. 7 257 IPR023271 -
Accr11g01097 271 Pfam Major intrinsic protein 30 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Accr11g01097 271 NCBIfam MIP family channel protein 39 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01097 Accr-Chr11 23533617 23535746 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01097 31 263 Major Intrinsic Protein MIP AT5G37810 55.794 8.24e-91 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01097 K09874 - gmx:100812577 373.244