Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g01041 ATGCCTCGCAAGGTGAATTATGGCCTTGATTATGGTGATGATTACGATGACTATGAAGACTATGATTATGATGTTGAAATAGAAGAATATGGAGAAGAAGAAGGACGTGGACCTGAACCTGATAAAAAGCAAGGGACTAAAGGGCTTTGGAGATGCTCTATTTGCACTTACGACAATGAAGAGGGCATGAATGTATGTGACATATGTGGTGTTATGCGTCATCCTTTGGTTAACACAGGAGGTTCTGACTATAGTAAAACAGTTGAAGGCATATGCAAAAATTCTGGAGCATCCAAATTGGCCAAGTCTCTTTTTGCAATATTGCCCCAACCGATGCCCAAAGAGGGTGTGTTATTTCTTAAGAAGGGTGATGGTTTTCTGACAGAAGATGGCAATAGCTACAAGCTTGGGAATGCCCAAGGAGAATTTTATGAATTTCACAAGTCTGTTATTACTCAAGGCAATCACCATCTAAATATAGCTCCTTTCAAGTTTGATGTTCTATCCCCAGATGATGTGGTTTCTACTGGACTGCAGTCTTCCAAAAAGGGACTGAAAGGCACAGTTGCTGACAGTAGAAGTTCTGACGTTTCATCAAATATTACGGAGATTAATGAACCGAAAGTACAGTCAAATGGTGAAAGTTCAGACAGCTCATCATCTTTGGTTCAGAAGGGCAGGCATGATAGTTTTGCTAAGAGCAAGCTTTCTGAGGATGTATCATTTAATCGGGAAATAAGTGATAAAACATTAGACAGCTTATCAGCATCTTCTGGTGTGGGTAAAATGAGTAAAATCAAGTCTTCTAATGATGATAAAATTGATATTCAATCCAGTGAAGAATTATTGGATAGTTTGTCTGGACGGCTGAAAGTTAGAGACAGTGGTAGTGAAATTTATTGCTCTTCTAGTAAAGATGTCAGACCTGGAAAATCAGATAATACTATTTCTAAAGAACCTCATCCGCAAATGCCTTATAAACCTGAAAAATGGATGCTCCCTCAACAAGCTGAAGATACCTTGACTCAGCTGAATCTTGCAGTTGTTGGTCATGTCGATTCTGGGAAGTCAACACTCTCGGGTAGACTACTACACCTATCGGGACGAATTACACAAAAAGAAATGCATAAATATGAAAAAGAGGCTAAATTACAGGGTAAGGGATCCTTTGCTTATGCTTGGGCACTTGATGAAAGTTCTGAAGAAAGAGAAAGGGGAATAACTATGACAGTTGCTGTTGCATATTTTGACACCAAAAAATATCATGTTGTGGTGCTTGATTCCCCGGGCCATAAAGATTTTGTTCCAAACATGATCTCTGGGGCAACACAAGCTGACGCTGCAATCCTTGTTATTGATGCATCAATGGGTGCATATGAAGCAGGTATGGATAGTGGCAAAGGACAAACAAGGGAGCATGCACAGCTTATTAGAAGTTTTGGTGTTGACCAGGTTATTGTTGCAATAAATAAGATGGATGCTGTGGGATACTCTAAAGATCGGTTTGATTTAATTAGACAGCAATTGGGAGCGTTCCTCCGGACTTGTGGTTTTAAAGATCCTTCTGTGTCATGGATTCCCTTGAGTGTCATAGAAAATCAAAATTTGGTGGCATCTCCTTCTGATGTTCATTTCAAATCCTGGTATAAAGGACCCTATCTATTAGATGCAATTGATTCGCTTCAACCTCCAACCAGAGAATTCTCAAAGCCTCTTCTAATGCCAGTATGTGATGTCATCAAATCACCTACGCTTGGACAAGTCTCTGCTTGCGGTAAATTAGAAGCTGGAGCTCTTCGTATTGGATCAAAGGTTTTAGTTATGCCTTCAGCTGTCTTGGGGACAGTTCGCACATTGGAGCGGGATTCCAGTGCCTGCTCCATTGCAAGAGCTGGCGATAATGTATCTGTCACATTGAATGGTGTAGATGCAAGTTATGTAATGCCAGGAGGAGTATTATGTCATCCTGATTTTCCTGTTAAAGTTGCAAGTCATTTGGAGTTGAAGGTGCTTGTGTTAGAAGGTGCAAATCCTATATTGGTAGGATCGCAGTTAGAATTCCATATACACCACGCCAAGGAGCCCGCCAGAGTTTCAAAAATAGTGTCAGTACTTGATCCGAAGACTGGGAAGGCGACAAAAAAGTCCCCTCGCTGTCTCATCGCAAAGCAAAGTGCAGTTCTTGAGGTAATTTTGCAAGAGCCAGTATGTGTGCTAGAATCCTCTAGCTGTAAAGCTCTTGGAAGGGTGTCTCTAAGAGCCTTAGGAAGAACAATCGCGGTTGGACTTGTGACCCGAATAATGGGAGAGCAAGAGTGA 2319 0.4114 MPRKVNYGLDYGDDYDDYEDYDYDVEIEEYGEEEGRGPEPDKKQGTKGLWRCSICTYDNEEGMNVCDICGVMRHPLVNTGGSDYSKTVEGICKNSGASKLAKSLFAILPQPMPKEGVLFLKKGDGFLTEDGNSYKLGNAQGEFYEFHKSVITQGNHHLNIAPFKFDVLSPDDVVSTGLQSSKKGLKGTVADSRSSDVSSNITEINEPKVQSNGESSDSSSSLVQKGRHDSFAKSKLSEDVSFNREISDKTLDSLSASSGVGKMSKIKSSNDDKIDIQSSEELLDSLSGRLKVRDSGSEIYCSSSKDVRPGKSDNTISKEPHPQMPYKPEKWMLPQQAEDTLTQLNLAVVGHVDSGKSTLSGRLLHLSGRITQKEMHKYEKEAKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASMGAYEAGMDSGKGQTREHAQLIRSFGVDQVIVAINKMDAVGYSKDRFDLIRQQLGAFLRTCGFKDPSVSWIPLSVIENQNLVASPSDVHFKSWYKGPYLLDAIDSLQPPTREFSKPLLMPVCDVIKSPTLGQVSACGKLEAGALRIGSKVLVMPSAVLGTVRTLERDSSACSIARAGDNVSVTLNGVDASYVMPGGVLCHPDFPVKVASHLELKVLVLEGANPILVGSQLEFHIHHAKEPARVSKIVSVLDPKTGKATKKSPRCLIAKQSAVLEVILQEPVCVLESSSCKALGRVSLRALGRTIAVGLVTRIMGEQE 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g01041 772 ProSitePatterns Zinc finger RanBP2-type signature. 50 69 IPR001876 -
Accr11g01041 772 SUPERFAMILY Translation proteins 563 658 IPR009000 -
Accr11g01041 772 MobiDBLite consensus disorder prediction 301 326 - -
Accr11g01041 772 CDD HBS1_C_III 659 767 - -
Accr11g01041 772 ProSiteProfiles Zinc finger RanBP2 type profile. 46 75 IPR001876 -
Accr11g01041 772 CDD EF1_alpha 345 564 - -
Accr11g01041 772 MobiDBLite consensus disorder prediction 177 227 - -
Accr11g01041 772 Gene3D Translation factors 569 658 - -
Accr11g01041 772 FunFam Translation elongation factor EF-1 568 658 - -
Accr11g01041 772 Pfam Elongation factor Tu GTP binding domain 344 559 IPR000795 GO:0003924|GO:0005525
Accr11g01041 772 FunFam Elongation factor 1 alpha-like protein 334 565 - -
Accr11g01041 772 Pfam Elongation factor Tu C-terminal domain 659 767 IPR004160 -
Accr11g01041 772 Gene3D Translation factors 662 771 - -
Accr11g01041 772 MobiDBLite consensus disorder prediction 27 46 - -
Accr11g01041 772 SMART zf_4 48 72 IPR001876 -
Accr11g01041 772 MobiDBLite consensus disorder prediction 177 234 - -
Accr11g01041 772 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 665 767 IPR009001 -
Accr11g01041 772 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 343 586 IPR027417 -
Accr11g01041 772 Gene3D - 332 565 IPR027417 -
Accr11g01041 772 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 341 572 IPR000795 GO:0003924|GO:0005525
Accr11g01041 772 FunFam elongation factor 1-alpha isoform X4 662 771 - -
Accr11g01041 772 PANTHER TRANSLATION FACTOR 340 767 - -
Accr11g01041 772 PRINTS GTP-binding elongation factor signature 424 434 IPR000795 GO:0003924|GO:0005525
Accr11g01041 772 PRINTS GTP-binding elongation factor signature 345 358 IPR000795 GO:0003924|GO:0005525
Accr11g01041 772 PRINTS GTP-binding elongation factor signature 404 412 IPR000795 GO:0003924|GO:0005525
Accr11g01041 772 PRINTS GTP-binding elongation factor signature 485 494 IPR000795 GO:0003924|GO:0005525
Accr11g01041 772 PRINTS GTP-binding elongation factor signature 440 451 IPR000795 GO:0003924|GO:0005525
Accr11g01041 772 SUPERFAMILY Ran binding protein zinc finger-like 47 73 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g01041 Accr-Chr11 21527049 21534289 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g01041 154 768 Eukaryotic Initiation Factors Gene Family AT5G10630 61.836 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g01041 K14416 - gmx:100801724 1034.63