Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr11g00995 ATGGACACAACCATTGCTTTAATGCTCATAGAAGCTGTACTGATTTTCCTGGGCTTAGCAATTTCTAAAGCTATCAGATTAATCTCTCCACTTCCTGCTATCCACCCTATTTCTGTTGATGATAGTTGTAAAGATGCTGCTGATTCGATTCCCTCAGTTTCTTCTCCTTCTAATCTCGTTGTTGCTTCTCCTCCAACCAAGTATGACGTCTTTCTTAGCTTTAGAGGAGAAGACACACTTGATAGTTTCTCTAGTTATCTCAATGAAGCACTTCGTGATGCAAACCTTCAAACTTGTATGGATCACAAGCCCCACAAAGGAGAGCATGTCTCACCGCTTCTTCTCAAAACAATAGAGGAATCAGAGATATTTTTGATCATTTTCTCCAAAGATTATGCTTCTTCTACATGGTGCATGGATGAGCTTGTTCATATTATGAAATGTAGGGATCAATACCAAAGGGTTGTCATCCCTATTTTCTACGAGGTAGATCCATCAAATGTCCGCAAACAAAATGCAAGTTTTGGAGATGGATTTGCTAAGCTTAAGCAAATATTTAAGCACAACCCAGAAAAAGTGGAGGAGTGGACAAATGCTTTGATCCAATCAACAAATCTTTCTGGGTGGGATTCAAAAAATATCAGGCCTGAGTCCAAACTCATTAAAAAGATTGTCAAAGATATTTTGAGCAAATTGAATAGCAAGTCGTCCTTTCATTTTGAAGGATTAGTTGGGATTGATCATCATATTCGGAAAATTGAAGAGCTACTGAGTGAAGCTCGCATTGTGGGAATATGGGGTATGGGTGGTATAGGTAAGACTACTCTTGCTAGAGCTGTATTTCACAAGTTGAAAGCACAATTTGAAACTTTCTCCTTTGTTGAAAATGTAAGAGAACAACTAGCAAAAATTGGGTTTGACAGGCTACAACAAGAATGTCTCAAAGAATTAATAAAAGATGAGGACATTAATGTCTTCGACATAAAATCCACTTTTGTGAGAAGTAGGCTTGGACGTAAAAAAATTCTTCTAGTACTTGATGATGTGGACAATTCAATACCAGCTGAAGATTTGACTGAAGTGTATCGTTGGTTTGGAAAAGGTAGCAAAATTATTATCACATCAAGAGACATGCAAGTACTTCATAGCGGTTCTGCATTTTCTATATATTCTGTTCCAAGAATGGATTTTCGTTATGCCCTTCATGTCTTTAGTTTGAAAGCATTCAAGCAAAATGATCCATTTAACGATTATATGGAGTTATCAGAATTTGTAGTGGATTATTGTCAAGGAAATCCATTGGCCCTTGTGATGTTGGGTTCTTTTCTTCAAGGCAGAGGAAAGGAAGAGTGGGAAAGTTATTTGGAAAAAATAAAAGAAGCTCTGCCCAAGTACATTGCTGATGTTTTAAAATTGAGTTTTGATGGGCTTGATGAGCACCAAAAGAATATGTTTCTTGACATAGCTTTTTTCATCAAGGAAGGAGTTGAAGTTTCTTTGGATTTAATAAGACAATTATACGGCTCTTCTATAGATATTGACATAAGTGTTCTTAAAGATAGATCCCTCACTTCATTTGATCATAATGGCTATATTGAGATGCATGATCTTGTAAGGGACATGGGCGTTGAAATTGCTAGAGAACAGTCATTCTCAAATCCTAGAGGCCCTGTTCGACTGCGAAGCCATCGGGACATTTATGATTTTTTCATTAGTAACGAGGTGACTACGTCATTCCGATGCTTGTCACTGGACATGAGCAAGATAAAAAGGATTCCATTGAGAGTTAATGACCTTCGAAAGATGCATAATTTAGTATTCTTAAAAATTTATTGGTCTGATTGGAGGGAGCCTTCAAAGTTGATTATTGGTAAAGATATGAGTTATCTTCCAGATGAACTAATTCAGGATTGTTAG 1917 0.3693 MDTTIALMLIEAVLIFLGLAISKAIRLISPLPAIHPISVDDSCKDAADSIPSVSSPSNLVVASPPTKYDVFLSFRGEDTLDSFSSYLNEALRDANLQTCMDHKPHKGEHVSPLLLKTIEESEIFLIIFSKDYASSTWCMDELVHIMKCRDQYQRVVIPIFYEVDPSNVRKQNASFGDGFAKLKQIFKHNPEKVEEWTNALIQSTNLSGWDSKNIRPESKLIKKIVKDILSKLNSKSSFHFEGLVGIDHHIRKIEELLSEARIVGIWGMGGIGKTTLARAVFHKLKAQFETFSFVENVREQLAKIGFDRLQQECLKELIKDEDINVFDIKSTFVRSRLGRKKILLVLDDVDNSIPAEDLTEVYRWFGKGSKIIITSRDMQVLHSGSAFSIYSVPRMDFRYALHVFSLKAFKQNDPFNDYMELSEFVVDYCQGNPLALVMLGSFLQGRGKEEWESYLEKIKEALPKYIADVLKLSFDGLDEHQKNMFLDIAFFIKEGVEVSLDLIRQLYGSSIDIDISVLKDRSLTSFDHNGYIEMHDLVRDMGVEIAREQSFSNPRGPVRLRSHRDIYDFFISNEVTTSFRCLSLDMSKIKRIPLRVNDLRKMHNLVFLKIYWSDWREPSKLIIGKDMSYLPDELIQDC 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr11g00995 638 Gene3D - 237 386 IPR027417 -
Accr11g00995 638 SMART till_3 67 206 IPR000157 GO:0007165
Accr11g00995 638 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 68 634 IPR044974 GO:0006952
Accr11g00995 638 FunFam Disease resistance protein (TIR-NBS-LRR class) 64 234 - -
Accr11g00995 638 ProSiteProfiles TIR domain profile. 66 232 IPR000157 GO:0007165
Accr11g00995 638 Gene3D - 396 478 IPR042197 -
Accr11g00995 638 PRINTS Disease resistance protein signature 262 277 - -
Accr11g00995 638 PRINTS Disease resistance protein signature 429 443 - -
Accr11g00995 638 PRINTS Disease resistance protein signature 336 350 - -
Accr11g00995 638 SUPERFAMILY "Winged helix" DNA-binding domain 466 565 IPR036390 -
Accr11g00995 638 Gene3D - 65 236 IPR035897 -
Accr11g00995 638 SUPERFAMILY Toll/Interleukin receptor TIR domain 63 209 IPR035897 -
Accr11g00995 638 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 234 488 IPR027417 -
Accr11g00995 638 Pfam TIR domain 67 244 IPR000157 GO:0007165
Accr11g00995 638 Pfam NB-ARC domain 248 462 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr11g00995 Accr-Chr11 20192917 20195096 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr11g00995 134 634 WRKY Transcription Factor Family AT4G12020 29.586 5.66e-57 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr11g00995 - - pcin:129286024 801.201